RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 C3orf20Q8ND61 904 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 RNF139Q8WU17 664 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 ZNF653Q96CK0 615 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 ZNF830Q96NB3 372 aaPredicted RBP7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 SLC2A13Q96QE2 648 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 SLC22A12Q96S37 553 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 MYADMQ96S97 322 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 CDK5RAP1Q96SZ6 601 aaKnown RBP7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 DDX23Q9BUQ8 820 aaKnown RBP7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 SELENOOQ9BVL4 669 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 PACSIN1Q9BY11 444 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 CCSER2Q9H7U1 834 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 TRPC7Q9HCX4 862 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 CNOT8Q9UFF9 292 aaKnown RBP7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 ZMYM5Q9UJ78 669 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 DNMT3LQ9UJW3 386 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 NUDT5Q9UKK9 219 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 CDH7Q9ULB5 785 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 INTUQ9ULD6 942 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 FAM50BQ9Y247 325 aa7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 REXO2Q9Y3B8 237 aaKnown RBP7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 ZFP37Q9Y6Q3 630 aaPredicted RBP7.89□□□□□ -1.15
AC004540.1-206ENST00000448056 TMEM191CA6NGB0 347 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 C2CD4BA6NLJ0 364 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 CFAP99D6REC4 459 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 CAPN9O14815 690 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 NRDCO43847 1150 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 IPO7O95373 1038 aaKnown RBP7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 GJB6O95452 261 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 OLFM2O95897 454 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 TMEM253P0C7T8 217 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 LAMP2P13473 410 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 PDGFRAP16234 1089 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 NOS2P35228 1153 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 FLT3P36888 993 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 AVPR1AP37288 418 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 MATKP42679 507 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 RPL7AP62424 266 aaKnown RBP7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 KRT83P78385 493 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 SLC7A9P82251 487 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 AAK1Q2M2I8 961 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 CCDC14Q49A88 953 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 DCAF6Q58WW2 860 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 FAM78AQ5JUQ0 283 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 DESI1Q6ICB0 168 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 TRNP1Q6NT89 227 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 DNAJC24Q6P3W2 148 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 RSRC2Q7L4I2 434 aaKnown RBP7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 GET4Q7L5D6 327 aaPredicted RBP7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 OTOP3Q7RTS5 596 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 ARID3BQ8IVW6 561 aaPredicted RBP7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 CMTM8Q8IZV2 173 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 JOSD2Q8TAC2 188 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 PRR7Q8TB68 274 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 ZSCAN18Q8TBC5 510 aaPredicted RBP7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 CTNNBL1Q8WYA6 563 aaPredicted RBP7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 NT5C3BQ969T7 300 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 ARHGEF26Q96DR7 871 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 PHF7Q9BWX1 381 aaPredicted RBP7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 KLF16Q9BXK1 252 aaPredicted RBP7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 NACA2Q9H009 215 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 KCNF1Q9H3M0 494 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 SLITRK6Q9H5Y7 841 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 MRPL47Q9HD33 250 aaKnown RBP7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 LUC7LQ9NQ29 371 aaKnown RBP7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 METTL5Q9NRN9 209 aaKnown RBP7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 OLA1Q9NTK5 396 aaKnown RBP7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 EPS15L1Q9UBC2 864 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 MYO1AQ9UBC5 1043 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 USTQ9Y2C2 406 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 NOTCH4Q99466 2003 aa7.88□□□□□ -1.15
AC004540.1-206ENST00000448056 C5orf42Q9H799 3197 aa7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 BRWD1Q9NSI6 2320 aa7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 DOCK6Q96HP0 2047 aa7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 MDM4O15151 490 aa7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 DAB1O75553 588 aa7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 ADH1BP00325 375 aa7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 MBL2P11226 248 aaPredicted RBP7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 IL9P15248 144 aa7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 GBP2P32456 591 aaPredicted RBP7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 KCNQ1P51787 676 aa7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 ZNF143P52747 638 aaPredicted RBP7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 COG7P83436 770 aa7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 ZXDBP98169 803 aa7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 EFEMP1Q12805 493 aa7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 EIF4EBP2Q13542 120 aaPredicted RBP7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 TCEAL1Q15170 157 aa7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 SLC25A52Q3SY17 297 aa7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 MSS51Q4VC12 460 aa7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 MSANTD2Q6P1R3 559 aa7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 DCUN1D2Q6PH85 259 aa7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 MIB1Q86YT6 1006 aa7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 EMC1Q8N766 993 aa7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 ACRBPQ8NEB7 543 aa7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 SLC35G2Q8TBE7 412 aa7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 DQX1Q8TE96 717 aaKnown RBP7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 ATXN2LQ8WWM7 1075 aaKnown RBP7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 RXFP2Q8WXD0 754 aa7.87□□□□□ -1.15
AC004540.1-206ENST00000448056 SMARCD2Q92925 531 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms