RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 TOP1MTQ969P6 601 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 LRRC27Q9C0I9 530 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 MTIF3Q9H2K0 278 aaKnown RBP13.57□□□□□ -0.24
DDX56-206ENST00000446987 PLGRKTQ9HBL7 147 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 CLIC5Q9NZA1 410 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 COL4A4P53420 1690 aaPredicted RBP13.57□□□□□ -0.24
DDX56-206ENST00000446987 LCHNA4D1U4 455 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 INO80B-WBP1J3KQ70 363 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 PEX1O43933 1283 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 STK10O94804 968 aaKnown RBP13.57□□□□□ -0.24
DDX56-206ENST00000446987 GJB5O95377 273 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 PLS3P13797 630 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 ARF4P18085 180 aaPredicted RBP13.57□□□□□ -0.24
DDX56-206ENST00000446987 HADHBP55084 474 aaKnown RBP13.57□□□□□ -0.24
DDX56-206ENST00000446987 NCKAP1LP55160 1127 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 ACTR3P61158 418 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 HTRA4P83105 476 aaPredicted RBP13.57□□□□□ -0.24
DDX56-206ENST00000446987 CREB5Q02930 508 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 RELAQ04206 551 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 FAM187BQ17R55 369 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 KLHDC10Q6PID8 442 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 TRIM67Q6ZTA4 783 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 DYMQ7RTS9 669 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 CATSPER4Q7RTX7 472 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 ZNF571Q7Z3V5 609 aaPredicted RBP13.57□□□□□ -0.24
DDX56-206ENST00000446987 SPRED2Q7Z698 418 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 CYP4X1Q8N118 509 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 C12orf50Q8NA57 414 aaPredicted RBP13.57□□□□□ -0.24
DDX56-206ENST00000446987 TMEM161BQ8NDZ6 487 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 PHOSPHO2Q8TCD6 241 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 NTPCRQ9BSD7 190 aaKnown RBP13.57□□□□□ -0.24
DDX56-206ENST00000446987 FGFBP2Q9BYJ0 223 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 MRPS26Q9BYN8 205 aaKnown RBP13.57□□□□□ -0.24
DDX56-206ENST00000446987 INO80BQ9C086 356 aaPredicted RBP13.57□□□□□ -0.24
DDX56-206ENST00000446987 PPCSQ9HAB8 311 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 ZNF180Q9UJW8 692 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 PADI4Q9UM07 663 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 PIN4Q9Y237 131 aaKnown RBP13.57□□□□□ -0.24
DDX56-206ENST00000446987 NR2E1Q9Y466 385 aa13.57□□□□□ -0.24
DDX56-206ENST00000446987 CNTNAP2Q9UHC6 1331 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.56□□□□□ -0.24
DDX56-206ENST00000446987 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.56□□□□□ -0.24
DDX56-206ENST00000446987 TMEM253P0C7T8 217 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 SMIM18P0DKX4 95 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 FUT4P22083 530 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 VPS41P49754 854 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 ARFIP2P53365 341 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 FAM189BP81408 668 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 CALCOCO2Q13137 446 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 THOC5Q13769 683 aaKnown RBP13.56□□□□□ -0.24
DDX56-206ENST00000446987 USP41Q3LFD5 358 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 DCAF12L1Q5VU92 463 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 LRRC8BQ6P9F7 803 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 RHBDF2Q6PJF5 856 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 FAM47EQ6ZV65 393 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 SYDE1Q6ZW31 735 aaPredicted RBP13.56□□□□□ -0.24
DDX56-206ENST00000446987 SV2BQ7L1I2 683 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 ZNF598Q86UK7 904 aaKnown RBP13.56□□□□□ -0.24
DDX56-206ENST00000446987 SCFD1Q8WVM8 642 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 RFFLQ8WZ73 363 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 BHMTQ93088 406 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 CPB2Q96IY4 423 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 TRAIPQ9BWF2 469 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 SSU72Q9NP77 194 aaKnown RBP13.56□□□□□ -0.24
DDX56-206ENST00000446987 TYW1Q9NV66 732 aaKnown RBP13.56□□□□□ -0.24
DDX56-206ENST00000446987 NUMBLQ9Y6R0 609 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 TRANK1O15050 2925 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 RALGAPA2Q2PPJ7 1873 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 ZMYM2Q9UBW7 1377 aa13.56□□□□□ -0.24
DDX56-206ENST00000446987 MEIS3P2A8K0S8 358 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 SLC16A4O15374 487 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 CIB2O75838 187 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 AMHP03971 560 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 ABHD2P08910 425 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 LINC00271P0C7V0 271 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 PYGMP11217 842 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 ITIH2P19823 946 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 DNAJB2P25686 324 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 GATMP50440 423 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 DMP1Q13316 513 aaPredicted RBP13.55□□□□□ -0.24
DDX56-206ENST00000446987 TCEAL1Q15170 157 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 ANKRD20A4Q4UJ75 823 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 FAM117BQ6P1L5 589 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 UGT2A3Q6UWM9 527 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 KYAT3Q6YP21 454 aaKnown RBP13.55□□□□□ -0.24
DDX56-206ENST00000446987 RBM44Q6ZP01 1051 aaKnown RBP13.55□□□□□ -0.24
DDX56-206ENST00000446987 TDRPQ86YL5 185 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 TREML1Q86YW5 311 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 TRIM59Q8IWR1 403 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 IQCF2Q8IXL9 164 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 ZC3H3Q8IXZ2 948 aaKnown RBP13.55□□□□□ -0.24
DDX56-206ENST00000446987 DTX3LQ8TDB6 740 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 OSBPL8Q9BZF1 889 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 TBC1D7Q9P0N9 293 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 TRAF3IP3Q9Y228 551 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 WASF2Q9Y6W5 498 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 ATG2AQ2TAZ0 1938 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 DENND3A2RUS2 1198 aa13.55□□□□□ -0.24
DDX56-206ENST00000446987 HGSO14964 777 aaPredicted RBP13.55□□□□□ -0.24
DDX56-206ENST00000446987 PRKCBP05771 671 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms