RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 DEUP1Q05D60 604 aa18.15■□□□□ 0.5
SGCE-206ENST00000445866 MSANTD2Q6P1R3 559 aa18.15■□□□□ 0.5
SGCE-206ENST00000445866 GET4Q7L5D6 327 aaPredicted RBP18.15■□□□□ 0.5
SGCE-206ENST00000445866 TAC4Q86UU9 113 aa18.15■□□□□ 0.5
SGCE-206ENST00000445866 CMTM8Q8IZV2 173 aa18.15■□□□□ 0.5
SGCE-206ENST00000445866 MAFAQ8NHW3 353 aaPredicted RBP18.15■□□□□ 0.5
SGCE-206ENST00000445866 FAM172AQ8WUF8 416 aa18.15■□□□□ 0.5
SGCE-206ENST00000445866 CENPIQ92674 756 aaPredicted RBP18.15■□□□□ 0.5
SGCE-206ENST00000445866 FGF13Q92913 245 aa18.15■□□□□ 0.5
SGCE-206ENST00000445866 NECTIN4Q96NY8 510 aa18.15■□□□□ 0.5
SGCE-206ENST00000445866 GKN1Q9NS71 199 aa18.15■□□□□ 0.5
SGCE-206ENST00000445866 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.15■□□□□ 0.5
SGCE-206ENST00000445866 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.15■□□□□ 0.5
SGCE-206ENST00000445866 ZMYM5Q9UJ78 669 aa18.15■□□□□ 0.5
SGCE-206ENST00000445866 GOLGA6L9A6NEM1 432 aa18.14■□□□□ 0.49
SGCE-206ENST00000445866 HMBSP08397 361 aa18.14■□□□□ 0.49
SGCE-206ENST00000445866 PFKLP17858 780 aa18.14■□□□□ 0.49
SGCE-206ENST00000445866 SSR1P43307 286 aaKnown RBP18.14■□□□□ 0.49
SGCE-206ENST00000445866 COG7P83436 770 aa18.14■□□□□ 0.49
SGCE-206ENST00000445866 ZNF252P-AS1Q0IIN9 211 aa18.14■□□□□ 0.49
SGCE-206ENST00000445866 ACAP1Q15027 740 aa18.14■□□□□ 0.49
SGCE-206ENST00000445866 SCYL2Q6P3W7 929 aa18.14■□□□□ 0.49
SGCE-206ENST00000445866 SND1Q7KZF4 910 aaKnown RBP eCLIP18.14■□□□□ 0.498e-7■■■□□ 16.5
SGCE-206ENST00000445866 DAAM2Q86T65 1068 aa18.14■□□□□ 0.49
SGCE-206ENST00000445866 TTC16Q8NEE8 873 aa18.14■□□□□ 0.49
SGCE-206ENST00000445866 ADAM33Q9BZ11 813 aa18.14■□□□□ 0.49
SGCE-206ENST00000445866 SMOC2Q9H3U7 446 aa18.14■□□□□ 0.49
SGCE-206ENST00000445866 SMPD4Q9NXE4 827 aa18.14■□□□□ 0.49
SGCE-206ENST00000445866 MSI1O43347 362 aaKnown RBP18.13■□□□□ 0.49
SGCE-206ENST00000445866 ENDOD1O94919 500 aa18.13■□□□□ 0.49
SGCE-206ENST00000445866 KPNA1P52294 538 aaPredicted RBP18.13■□□□□ 0.49
SGCE-206ENST00000445866 RAB6CQ53S08 254 aa18.13■□□□□ 0.49
SGCE-206ENST00000445866 CC2D1AQ6P1N0 951 aaPredicted RBP18.13■□□□□ 0.49
SGCE-206ENST00000445866 STRADAQ7RTN6 431 aa18.13■□□□□ 0.49
SGCE-206ENST00000445866 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.13■□□□□ 0.49
SGCE-206ENST00000445866 SUSD6Q92537 303 aa18.13■□□□□ 0.49
SGCE-206ENST00000445866 PGAP3Q96FM1 320 aaPredicted RBP18.13■□□□□ 0.49
SGCE-206ENST00000445866 SERPINB11Q96P15 392 aa18.13■□□□□ 0.49
SGCE-206ENST00000445866 IRX2Q9BZI1 471 aaPredicted RBP18.13■□□□□ 0.49
SGCE-206ENST00000445866 RAB6CQ9H0N0 254 aa18.13■□□□□ 0.49
SGCE-206ENST00000445866 POMKQ9H5K3 350 aa18.13■□□□□ 0.49
SGCE-206ENST00000445866 KCND1Q9NSA2 647 aa18.13■□□□□ 0.49
SGCE-206ENST00000445866 GDE1Q9NZC3 331 aa18.13■□□□□ 0.49
SGCE-206ENST00000445866 CALCOCO1Q9P1Z2 691 aa18.13■□□□□ 0.49
SGCE-206ENST00000445866 CDH7Q9ULB5 785 aa18.13■□□□□ 0.49
SGCE-206ENST00000445866 CPQQ9Y646 472 aa18.13■□□□□ 0.49
SGCE-206ENST00000445866 ALG6Q9Y672 507 aa18.13■□□□□ 0.49
SGCE-206ENST00000445866 GRXCR2A6NFK2 248 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 PALMO75781 387 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 GBP2P32456 591 aaPredicted RBP18.12■□□□□ 0.49
SGCE-206ENST00000445866 RDXP35241 583 aaKnown RBP18.12■□□□□ 0.49
SGCE-206ENST00000445866 ATXN1P54253 815 aaKnown RBP18.12■□□□□ 0.49
SGCE-206ENST00000445866 TBX4P57082 545 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 SLC7A9P82251 487 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 ZC3H12AQ5D1E8 599 aaKnown RBP18.12■□□□□ 0.49
SGCE-206ENST00000445866 POTEHQ6S545 545 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 ARID3BQ8IVW6 561 aaPredicted RBP18.12■□□□□ 0.49
SGCE-206ENST00000445866 NPAS3Q8IXF0 933 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 ARFGAP1Q8N6T3 406 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 NIPA2Q8N8Q9 360 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 NCAPGQ9BPX3 1015 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 KLF16Q9BXK1 252 aaPredicted RBP18.12■□□□□ 0.49
SGCE-206ENST00000445866 SMG9Q9H0W8 520 aaKnown RBP18.12■□□□□ 0.49
SGCE-206ENST00000445866 WDCPQ9H6R7 721 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 PIGVQ9NUD9 493 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 PCSK1NQ9UHG2 260 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 HBS1LQ9Y450 684 aaKnown RBP18.12■□□□□ 0.49
SGCE-206ENST00000445866 HYOU1Q9Y4L1 999 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 GRID2IPA4D2P6 1211 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 KIF5CO60282 957 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 IGLV3-25P01717 112 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 COMTP21964 271 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 SLC1A1P43005 524 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 HDAC4P56524 1084 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 SMAD4Q13485 552 aaKnown RBP18.12■□□□□ 0.49
SGCE-206ENST00000445866 TRIP4Q15650 581 aaPredicted RBP18.12■□□□□ 0.49
SGCE-206ENST00000445866 OTUD1Q5VV17 481 aaPredicted RBP18.12■□□□□ 0.49
SGCE-206ENST00000445866 ZSCAN18Q8TBC5 510 aaPredicted RBP18.12■□□□□ 0.49
SGCE-206ENST00000445866 GOLPH3Q9H4A6 298 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 TDP1Q9NUW8 608 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 TMEM51Q9NW97 253 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 TLR6Q9Y2C9 796 aa18.12■□□□□ 0.49
SGCE-206ENST00000445866 COL4A4P53420 1690 aaPredicted RBP18.11■□□□□ 0.49
SGCE-206ENST00000445866 IRAK2O43187 625 aa18.11■□□□□ 0.49
SGCE-206ENST00000445866 MBTPS2O43462 519 aa18.11■□□□□ 0.49
SGCE-206ENST00000445866 SPOPO43791 374 aa18.11■□□□□ 0.49
SGCE-206ENST00000445866 OLFM2O95897 454 aa18.11■□□□□ 0.49
SGCE-206ENST00000445866 IRF1P10914 325 aa18.11■□□□□ 0.49
SGCE-206ENST00000445866 MIPP30301 263 aa18.11■□□□□ 0.49
SGCE-206ENST00000445866 CCR1P32246 355 aa18.11■□□□□ 0.49
SGCE-206ENST00000445866 MAN1A1P33908 653 aa18.11■□□□□ 0.49
SGCE-206ENST00000445866 CXCR3P49682 368 aa18.11■□□□□ 0.49
SGCE-206ENST00000445866 KCNQ1P51787 676 aa18.11■□□□□ 0.49
SGCE-206ENST00000445866 DAB2IPQ5VWQ8 1189 aa18.11■□□□□ 0.49
SGCE-206ENST00000445866 BNIPLQ7Z465 357 aa18.11■□□□□ 0.49
SGCE-206ENST00000445866 FAM131BQ86XD5 332 aa18.11■□□□□ 0.49
SGCE-206ENST00000445866 CPNE8Q86YQ8 564 aa18.11■□□□□ 0.49
SGCE-206ENST00000445866 SYCE1Q8N0S2 351 aa18.11■□□□□ 0.49
SGCE-206ENST00000445866 MYADMQ96S97 322 aa18.11■□□□□ 0.49
SGCE-206ENST00000445866 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms