RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	MLXIPL	Q9NP71	852 aa		7.02	□□□□□ -1.29
TRIM6-205	ENST00000445329	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	7.02	□□□□□ -1.29
TRIM6-205	ENST00000445329	IGSF9	Q9P2J2	1179 aa		7.02	□□□□□ -1.29
TRIM6-205	ENST00000445329	APPL1	Q9UKG1	709 aa		7.02	□□□□□ -1.29
TRIM6-205	ENST00000445329	DUSP10	Q9Y6W6	482 aa		7.02	□□□□□ -1.29
TRIM6-205	ENST00000445329	MAU2	Q9Y6X3	613 aa		7.02	□□□□□ -1.29
TRIM6-205	ENST00000445329		A8MUA0	341 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	GOLGA8S	H3BPF8	625 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	PLA2G6	O60733	806 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	JRK	O75564	520 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	SNX4	O95219	450 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	CHRM5	P08912	532 aa	Predicted RBP	7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	CLEC2L	P0C7M8	214 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	THRA	P10827	490 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	CDH1	P12830	882 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	AMPD1	P23109	780 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	RPA1	P27694	616 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	KCNJ5	P48544	419 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	KCNMA1	Q12791	1236 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	NCOA4	Q13772	614 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	KIZ	Q2M2Z5	673 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	AARS2	Q5JTZ9	985 aa	Known RBP	7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	TYW1B	Q6NUM6	668 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	IKBIP	Q70UQ0	350 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	DPP9	Q86TI2	863 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	MAPKAPK5	Q8IW41	473 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	TPH2	Q8IWU9	490 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	KCT2	Q8NC54	265 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	TTC9	Q92623	222 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	ZUFSP	Q96AP4	578 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	ARHGEF26	Q96DR7	871 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	RANBP9	Q96S59	729 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	AP1M1	Q9BXS5	423 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	SLC4A5	Q9BY07	1137 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	LSG1	Q9H089	658 aa	Known RBP	7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	OSGEPL1	Q9H4B0	414 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	TLE6	Q9H808	572 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	PLK2	Q9NYY3	685 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	ADD3	Q9UEY8	706 aa	Known RBP	7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	AMACR	Q9UHK6	382 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	TINAG	Q9UJW2	476 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	CAPN11	Q9UMQ6	739 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	CHKB	Q9Y259	395 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	MAP3K2	Q9Y2U5	619 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	PRKAB1	Q9Y478	270 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	ZNF804B	A4D1E1	1349 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	ARFGEF2	Q9Y6D5	1785 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	TM9SF1	O15321	606 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	NUAK1	O60285	661 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	GAS7	O60861	476 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	CYP3A4	P08684	503 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	KRT3	P12035	628 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	PFKFB1	P16118	471 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	LIMK1	P53667	647 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	IFI35	P80217	286 aa	Predicted RBP	7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	PGS1	Q32NB8	556 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	C5orf22	Q49AR2	442 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	CFAP221	Q4G0U5	840 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	METTL24	Q5JXM2	366 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	ZNF425	Q6IV72	752 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	TTI2	Q6NXR4	508 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	PLBD1	Q6P4A8	553 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	FBXL19	Q6PCT2	694 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	UNC5A	Q6ZN44	842 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	FRA10AC1	Q70Z53	315 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	ADGRG6	Q86SQ4	1221 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	ZBTB46	Q86UZ6	589 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	RTKN2	Q8IZC4	609 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	OR8H2	Q8N162	312 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	SRBD1	Q8N5C6	995 aa	Known RBP	7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	AFG1L	Q8WV93	481 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	TP53INP1	Q96A56	240 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	GRAMD1A	Q96CP6	724 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	SUCLG2	Q96I99	432 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	PPP1R2P1	Q96PQ5	205 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	SYNDIG1	Q9H7V2	258 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	DNAJC17	Q9NVM6	304 aa	Known RBP	7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	POLR3B	Q9NW08	1133 aa	Predicted RBP	7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	ZDHHC7	Q9NXF8	308 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	REV1	Q9UBZ9	1251 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	VTI1B	Q9UEU0	232 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	AFF4	Q9UHB7	1163 aa	Known RBP	7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	CAB39	Q9Y376	341 aa	Predicted RBP	7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	C4B	P0C0L5	1744 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	NUP188	Q5SRE5	1749 aa		7.01	□□□□□ -1.29
TRIM6-205	ENST00000445329	TRIM75P	A6NK02	468 aa		7	□□□□□ -1.29
TRIM6-205	ENST00000445329	LRRC53	A6NM62	1247 aa		7	□□□□□ -1.29
TRIM6-205	ENST00000445329	LINC00587	B1AMM8	73 aa		7	□□□□□ -1.29
TRIM6-205	ENST00000445329	TRAFD1	O14545	582 aa	Predicted RBP	7	□□□□□ -1.29
TRIM6-205	ENST00000445329	BET1	O15155	118 aa		7	□□□□□ -1.29
TRIM6-205	ENST00000445329	MSI1	O43347	362 aa	Known RBP	7	□□□□□ -1.29
TRIM6-205	ENST00000445329	RAD51C	O43502	376 aa		7	□□□□□ -1.29
TRIM6-205	ENST00000445329	LRRN2	O75325	713 aa		7	□□□□□ -1.29
TRIM6-205	ENST00000445329	AGR2	O95994	175 aa		7	□□□□□ -1.29
TRIM6-205	ENST00000445329	UROD	P06132	367 aa		7	□□□□□ -1.29
TRIM6-205	ENST00000445329	CYP3A5	P20815	502 aa		7	□□□□□ -1.29
TRIM6-205	ENST00000445329	PML	P29590	882 aa		7	□□□□□ -1.29
TRIM6-205	ENST00000445329	NAMPT	P43490	491 aa		7	□□□□□ -1.29
TRIM6-205	ENST00000445329	HARS2	P49590	506 aa	Known RBP	7	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms