RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 EDC3Q96F86 508 aaKnown RBP5.24□□□□□ -1.57
HMGB3P6-201ENST00000444896 VPS50Q96JG6 964 aa5.24□□□□□ -1.57
HMGB3P6-201ENST00000444896 CRAMP1Q96RY5 1269 aa5.24□□□□□ -1.57
HMGB3P6-201ENST00000444896 PAAF1Q9BRP4 392 aa5.24□□□□□ -1.57
HMGB3P6-201ENST00000444896 SORBS1Q9BX66 1292 aaKnown RBP5.24□□□□□ -1.57
HMGB3P6-201ENST00000444896 CIPCQ9C0C6 399 aa5.24□□□□□ -1.57
HMGB3P6-201ENST00000444896 SERGEFQ9UGK8 458 aa5.24□□□□□ -1.57
HMGB3P6-201ENST00000444896 INSL6Q9Y581 213 aa5.24□□□□□ -1.57
HMGB3P6-201ENST00000444896 GXYLT2A0PJZ3 443 aa5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 FCHO1O14526 889 aa5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 PRAMEF2O60811 474 aa5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 EIF3JO75822 258 aaKnown RBP5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 GRK6P43250 576 aa5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 DGKQP52824 942 aa5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 ALDH18A1P54886 795 aaKnown RBP5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 GPC5P78333 572 aa5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 TRIM60Q495X7 471 aa5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 INO80DQ53TQ3 878 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 AKNAD1Q5T1N1 836 aa5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 TANGO2Q6ICL3 276 aa5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 RINT1Q6NUQ1 792 aa5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 JMJD6Q6NYC1 403 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 SLC29A4Q7RTT9 530 aa5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 ZNF804AQ7Z570 1209 aa5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 BCDIN3DQ7Z5W3 292 aaKnown RBP5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 ARHGEF25Q86VW2 580 aa5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 C12orf76Q8N812 135 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 RSC1A1Q92681 617 aa5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 SARAFQ96BY9 339 aa5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 SNX18Q96RF0 628 aa5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 MMS19Q96T76 1030 aa5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 HERPUD2Q9BSE4 406 aa5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 MLXIPQ9HAP2 919 aa5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 AGO4Q9HCK5 861 aaKnown RBP5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 HERC5Q9UII4 1024 aaKnown RBP5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 MORC2Q9Y6X9 1032 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 AOX1Q06278 1338 aa5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 ARID4BQ4LE39 1312 aaPredicted RBP5.23□□□□□ -1.57
HMGB3P6-201ENST00000444896 RB1CC1Q8TDY2 1594 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 hCG_1642624A0A1W2PR95 340 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 TCRBV5S1A1TA0A578 114 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 FAM90A18PA6NE21 464 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 FAM90A16PA6NEW6 464 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 LRRC3CA6NJW4 275 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 FAM90A9PA6NNJ1 464 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 FAM90A5PA8MXJ8 464 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 TARM1B6A8C7 271 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 IPO5O00410 1097 aaKnown RBP5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 EXOC3O60645 756 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 JTBO76095 146 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 CER1O95813 267 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 IGLV2-14P01704 120 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 FAM90A15PP0C7V4 464 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 FAM90A14PP0C7W9 464 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 NHLRC4P0CG21 123 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 ALADP13716 330 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 RENBPP51606 427 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 COPB1P53618 953 aaKnown RBP5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 HOXA4Q00056 320 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 SEMA3BQ13214 749 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 CSHL1Q14406 222 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 ANO1Q5XXA6 986 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 SULT6B1Q6IMI4 303 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 P3H2Q8IVL5 708 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 EXOC8Q8IYI6 725 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 NRSN1Q8IZ57 195 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 SCAMP5Q8TAC9 235 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 OTUD7AQ8TE49 926 aaPredicted RBP5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 SLC22A17Q8WUG5 538 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 OVCA2Q8WZ82 227 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 TMEM120AQ9BXJ8 343 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 PABPC3Q9H361 631 aaKnown RBP5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 SNX15Q9NRS6 342 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 GAR1Q9NY12 217 aaKnown RBP5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 SEMA5BQ9P283 1151 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 FZD4Q9ULV1 537 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 PCDHGB3Q9Y5G1 929 aa5.22□□□□□ -1.57
HMGB3P6-201ENST00000444896 LOC105369274A0A096LPK9 316 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 LOC102723532A0A0G2JNH3 316 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 PLEKHD1A6NEE1 506 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 H3BNC9 293 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 RPP40O75818 363 aaKnown RBP5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 MT-CO3P00414 261 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 ITGA2BP08514 1039 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 TMIGD3P0DMS9 266 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 GPD1P21695 349 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 GALNSP34059 522 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 GSTM5P46439 218 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 CFHR3Q02985 330 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 BFSP2Q13515 415 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 POSTNQ15063 836 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 C16orf89Q6UX73 402 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 TRIM72Q6ZMU5 477 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 TRABD2AQ86V40 505 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 SLC44A2Q8IWA5 706 aaPredicted RBP5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 OR4N4Q8N0Y3 316 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 TRAPPC12Q8WVT3 735 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 RTKNQ9BST9 563 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 KRTAP4-5Q9BYR2 181 aa5.21□□□□□ -1.58
HMGB3P6-201ENST00000444896 R3HDMLQ9H3Y0 253 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms