RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 SYT13Q7L8C5 426 aa19.47■□□□□ 0.71
CCDC188-202ENST00000444532 PHTF2Q8N3S3 785 aa19.47■□□□□ 0.71
CCDC188-202ENST00000444532 NAT16Q8N8M0 369 aa19.47■□□□□ 0.71
CCDC188-202ENST00000444532 CLEC4CQ8WTT0 213 aa19.47■□□□□ 0.71
CCDC188-202ENST00000444532 ACDQ96AP0 544 aa19.47■□□□□ 0.71
CCDC188-202ENST00000444532 XPO6Q96QU8 1125 aaKnown RBP19.47■□□□□ 0.71
CCDC188-202ENST00000444532 TRIM62Q9BVG3 475 aa19.47■□□□□ 0.71
CCDC188-202ENST00000444532 LSM14BQ9BX40 385 aaKnown RBP19.47■□□□□ 0.71
CCDC188-202ENST00000444532 BBS2Q9BXC9 721 aa19.47■□□□□ 0.71
CCDC188-202ENST00000444532 NAA15Q9BXJ9 866 aaKnown RBP19.47■□□□□ 0.71
CCDC188-202ENST00000444532 LIMA1Q9UHB6 759 aaKnown RBP19.47■□□□□ 0.71
CCDC188-202ENST00000444532 SFMBT1Q9UHJ3 866 aa19.47■□□□□ 0.71
CCDC188-202ENST00000444532 AGO1Q9UL18 857 aaKnown RBP19.47■□□□□ 0.71
CCDC188-202ENST00000444532 SLC8A2Q9UPR5 921 aa19.47■□□□□ 0.71
CCDC188-202ENST00000444532 FHOD1Q9Y613 1164 aa19.47■□□□□ 0.71
CCDC188-202ENST00000444532 ZFHX2Q9C0A1 2572 aaPredicted RBP19.47■□□□□ 0.71
CCDC188-202ENST00000444532 LRRC10BA6NIK2 292 aa19.46■□□□□ 0.71
CCDC188-202ENST00000444532 NEDD8-MDP1E9PL57 170 aa19.46■□□□□ 0.71
CCDC188-202ENST00000444532 CACNG3O60359 315 aa19.46■□□□□ 0.71
CCDC188-202ENST00000444532 TULP3O75386 442 aa19.46■□□□□ 0.71
CCDC188-202ENST00000444532 TYRP14679 529 aa19.46■□□□□ 0.71
CCDC188-202ENST00000444532 CDK11BP21127 795 aaKnown RBP19.46■□□□□ 0.71
CCDC188-202ENST00000444532 KRT9P35527 623 aa19.46■□□□□ 0.71
CCDC188-202ENST00000444532 HARS2P49590 506 aaKnown RBP19.46■□□□□ 0.71
CCDC188-202ENST00000444532 BEND5Q7L4P6 421 aa19.46■□□□□ 0.71
CCDC188-202ENST00000444532 SLC47A2Q86VL8 602 aa19.46■□□□□ 0.71
CCDC188-202ENST00000444532 DENND1CQ8IV53 801 aa19.46■□□□□ 0.71
CCDC188-202ENST00000444532 CAMKK1Q8N5S9 505 aa19.46■□□□□ 0.71
CCDC188-202ENST00000444532 USP33Q8TEY7 942 aa19.46■□□□□ 0.71
CCDC188-202ENST00000444532 BPIFA3Q9BQP9 254 aa19.46■□□□□ 0.71
CCDC188-202ENST00000444532 STK33Q9BYT3 514 aa19.46■□□□□ 0.71
CCDC188-202ENST00000444532 CYTH4Q9UIA0 394 aa19.46■□□□□ 0.71
CCDC188-202ENST00000444532 DAAM1Q9Y4D1 1078 aa19.46■□□□□ 0.71
CCDC188-202ENST00000444532 VPS13AQ96RL7 3174 aa19.45■□□□□ 0.7
CCDC188-202ENST00000444532 NCAM1P13591 858 aa19.45■□□□□ 0.7
CCDC188-202ENST00000444532 ZNF18P17022 549 aa19.45■□□□□ 0.7
CCDC188-202ENST00000444532 COPB1P53618 953 aaKnown RBP19.45■□□□□ 0.7
CCDC188-202ENST00000444532 SNX16P57768 344 aa19.45■□□□□ 0.7
CCDC188-202ENST00000444532 MESP2Q0VG99 397 aa19.45■□□□□ 0.7
CCDC188-202ENST00000444532 PDCLQ13371 301 aa19.45■□□□□ 0.7
CCDC188-202ENST00000444532 NCAPHQ15003 741 aa19.45■□□□□ 0.7
CCDC188-202ENST00000444532 HSF5Q4G112 596 aaPredicted RBP19.45■□□□□ 0.7
CCDC188-202ENST00000444532 ANO6Q4KMQ2 910 aa19.45■□□□□ 0.7
CCDC188-202ENST00000444532 LONP2Q86WA8 852 aa19.45■□□□□ 0.7
CCDC188-202ENST00000444532 CPXM2Q8N436 756 aa19.45■□□□□ 0.7
CCDC188-202ENST00000444532 WDTC1Q8N5D0 677 aa19.45■□□□□ 0.7
CCDC188-202ENST00000444532 KCNV2Q8TDN2 545 aa19.45■□□□□ 0.7
CCDC188-202ENST00000444532 NOX5Q96PH1 765 aa19.45■□□□□ 0.7
CCDC188-202ENST00000444532 CCDC163A0A0D9SF12 145 aa19.44■□□□□ 0.7
CCDC188-202ENST00000444532 TBC1D3BA6NDS4 549 aa19.44■□□□□ 0.7
CCDC188-202ENST00000444532 E5RJQ4 531 aa19.44■□□□□ 0.7
CCDC188-202ENST00000444532 PAPSS1O43252 624 aaPredicted RBP19.44■□□□□ 0.7
CCDC188-202ENST00000444532 LATS1O95835 1130 aa19.44■□□□□ 0.7
CCDC188-202ENST00000444532 FYNP06241 537 aa19.44■□□□□ 0.7
CCDC188-202ENST00000444532 PNMA6AP0CW24 399 aaPredicted RBP19.44■□□□□ 0.7
CCDC188-202ENST00000444532 PTMSP20962 102 aa19.44■□□□□ 0.7
CCDC188-202ENST00000444532 CNR2P34972 360 aa19.44■□□□□ 0.7
CCDC188-202ENST00000444532 FNTBP49356 437 aa19.44■□□□□ 0.7
CCDC188-202ENST00000444532 SEC13P55735 322 aa19.44■□□□□ 0.7
CCDC188-202ENST00000444532 KDSRQ06136 332 aa19.44■□□□□ 0.7
CCDC188-202ENST00000444532 KLHL40Q2TBA0 621 aa19.44■□□□□ 0.7
CCDC188-202ENST00000444532 C2orf27AQ580R0 203 aa19.44■□□□□ 0.7
CCDC188-202ENST00000444532 GRAMD4Q6IC98 578 aa19.44■□□□□ 0.7
CCDC188-202ENST00000444532 UNC45BQ8IWX7 931 aa19.44■□□□□ 0.7
CCDC188-202ENST00000444532 FAM217AQ8IXS0 508 aa19.44■□□□□ 0.7
CCDC188-202ENST00000444532 AOPEPQ8N6M6 819 aa19.44■□□□□ 0.7
CCDC188-202ENST00000444532 FAM149B1Q96BN6 582 aa19.44■□□□□ 0.7
CCDC188-202ENST00000444532 PPP1R13BQ96KQ4 1090 aa19.44■□□□□ 0.7
CCDC188-202ENST00000444532 EPC1Q9H2F5 836 aa19.44■□□□□ 0.7
CCDC188-202ENST00000444532 DNAJC17Q9NVM6 304 aaKnown RBP19.44■□□□□ 0.7
CCDC188-202ENST00000444532 CEP83Q9Y592 693 aa19.44■□□□□ 0.7
CCDC188-202ENST00000444532 SMTNL1A8MU46 457 aa19.43■□□□□ 0.7
CCDC188-202ENST00000444532 LGALS16A8MUM7 142 aa19.43■□□□□ 0.7
CCDC188-202ENST00000444532 CYBBP04839 570 aa19.43■□□□□ 0.7
CCDC188-202ENST00000444532 YWHAZP63104 245 aaKnown RBP19.43■□□□□ 0.7
CCDC188-202ENST00000444532 RING1Q06587 406 aa19.43■□□□□ 0.7
CCDC188-202ENST00000444532 DMWDQ09019 674 aa19.43■□□□□ 0.7
CCDC188-202ENST00000444532 DMC1Q14565 340 aa19.43■□□□□ 0.7
CCDC188-202ENST00000444532 WDR5BQ86VZ2 330 aa19.43■□□□□ 0.7
CCDC188-202ENST00000444532 PASD1Q8IV76 773 aa19.43■□□□□ 0.7
CCDC188-202ENST00000444532 TERB1Q8NA31 727 aa19.43■□□□□ 0.7
CCDC188-202ENST00000444532 SUMF1Q8NBK3 374 aa19.43■□□□□ 0.7
CCDC188-202ENST00000444532 GANQ9H2C0 597 aa19.43■□□□□ 0.7
CCDC188-202ENST00000444532 HSD3B7Q9H2F3 369 aa19.43■□□□□ 0.7
CCDC188-202ENST00000444532 STOML2Q9UJZ1 356 aa19.43■□□□□ 0.7
CCDC188-202ENST00000444532 FBXO10Q9UK96 956 aa19.43■□□□□ 0.7
CCDC188-202ENST00000444532 MMP17Q9ULZ9 603 aa19.43■□□□□ 0.7
CCDC188-202ENST00000444532 F8VZ95 297 aa19.42■□□□□ 0.7
CCDC188-202ENST00000444532 CAPN9O14815 690 aa19.42■□□□□ 0.7
CCDC188-202ENST00000444532 MSI1O43347 362 aaKnown RBP19.42■□□□□ 0.7
CCDC188-202ENST00000444532 PENKP01210 267 aaPredicted RBP19.42■□□□□ 0.7
CCDC188-202ENST00000444532 IGLV3-27P01718 113 aa19.42■□□□□ 0.7
CCDC188-202ENST00000444532 GLI1P08151 1106 aa19.42■□□□□ 0.7
CCDC188-202ENST00000444532 CYP11B1P15538 503 aa19.42■□□□□ 0.7
CCDC188-202ENST00000444532 KIR2DL1P43626 348 aaPredicted RBP19.42■□□□□ 0.7
CCDC188-202ENST00000444532 DGKGP49619 791 aa19.42■□□□□ 0.7
CCDC188-202ENST00000444532 ZNF445P59923 1031 aa19.42■□□□□ 0.7
CCDC188-202ENST00000444532 NNTQ13423 1086 aa19.42■□□□□ 0.7
CCDC188-202ENST00000444532 ADGRF1Q5T601 910 aa19.42■□□□□ 0.7
CCDC188-202ENST00000444532 FYB2Q5VWT5 728 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms