RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 EIF2AQ9BY44 585 aaKnown RBP4.13□□□□□ -1.75
UBR3-206ENST00000444475 PRDM12Q9H4Q4 367 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 MBNL1Q9NR56 388 aaKnown RBP4.13□□□□□ -1.75
UBR3-206ENST00000444475 FAM86C1Q9NVL1 165 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 CNIH4Q9P003 139 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 CGGBP1Q9UFW8 167 aaPredicted RBP4.13□□□□□ -1.75
UBR3-206ENST00000444475 MAD2L2Q9UI95 211 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 SLCO3A1Q9UIG8 710 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 MFSD2BA6NFX1 497 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 CCDC154A6NI56 674 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 GLOD5A6NK44 160 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 ENO4A6NNW6 628 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 E2F3O00716 465 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 GALR2O43603 387 aaPredicted RBP4.13□□□□□ -1.75
UBR3-206ENST00000444475 NDST3O95803 873 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 PDGFBP01127 241 aaPredicted RBP4.13□□□□□ -1.75
UBR3-206ENST00000444475 CASTP20810 708 aaKnown RBP4.13□□□□□ -1.75
UBR3-206ENST00000444475 AGAP20933 346 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 PCSK1P29120 753 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 BMI1P35226 326 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 HDGFP51858 240 aaKnown RBP4.13□□□□□ -1.75
UBR3-206ENST00000444475 ERVFC1P60507 584 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 RPS3AP61247 264 aaKnown RBP4.13□□□□□ -1.75
UBR3-206ENST00000444475 LACTBP83111 547 aaPredicted RBP4.13□□□□□ -1.75
UBR3-206ENST00000444475 GPS1Q13098 491 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 RPS6KA1Q15418 735 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 NHSL2Q5HYW2 709 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 LIN9Q5TKA1 542 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 MBNL2Q5VZF2 373 aaKnown RBP4.13□□□□□ -1.75
UBR3-206ENST00000444475 FAM173BQ6P4H8 233 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 USP53Q70EK8 1073 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 COMTD1Q86VU5 262 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 LDHDQ86WU2 507 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 MICU3Q86XE3 530 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 SIRT2Q8IXJ6 389 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 CCDC26Q8TAB7 109 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 METTL6Q8TCB7 284 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 ZKSCAN4Q969J2 545 aaPredicted RBP4.13□□□□□ -1.75
UBR3-206ENST00000444475 SIPA1Q96FS4 1042 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 FCRL4Q96PJ5 515 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 NR1H4Q96RI1 486 aaPredicted RBP4.13□□□□□ -1.75
UBR3-206ENST00000444475 DPH1Q9BZG8 443 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 QRSL1Q9H0R6 528 aaKnown RBP4.13□□□□□ -1.75
UBR3-206ENST00000444475 TAB2Q9NYJ8 693 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 MTRF1LQ9UGC7 380 aaKnown RBP4.13□□□□□ -1.75
UBR3-206ENST00000444475 OGDHLQ9ULD0 1010 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 COMMD3-BMI1R4GMX3 469 aa4.13□□□□□ -1.75
UBR3-206ENST00000444475 VWA3AA6NCI4 1184 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 STX16-NPEPL1H3BU86 382 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 NKRFO15226 690 aaKnown RBP eCLIP4.12□□□□□ -1.75
UBR3-206ENST00000444475 KCNQ3O43525 872 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 RECQL5O94762 991 aaPredicted RBP4.12□□□□□ -1.75
UBR3-206ENST00000444475 WEE2P0C1S8 567 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 HOXB3P14651 431 aaPredicted RBP4.12□□□□□ -1.75
UBR3-206ENST00000444475 PTPRAP18433 802 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 SREBF1P36956 1147 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 KRT17Q04695 432 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 NOGQ13253 232 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 KCNC3Q14003 757 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 GNA13Q14344 377 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 SQLEQ14534 574 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 CLCA4Q14CN2 919 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 PCLAFQ15004 111 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 RAB41Q5JT25 222 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 DIEXFQ68CQ4 756 aaKnown RBP4.12□□□□□ -1.75
UBR3-206ENST00000444475 MIS18BP1Q6P0N0 1132 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 CHST3Q7LGC8 479 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 VASH2Q86V25 355 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 ZC3H7AQ8IWR0 971 aaKnown RBP4.12□□□□□ -1.75
UBR3-206ENST00000444475 REXO1L1PQ8IX06 675 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 LPCAT1Q8NF37 534 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 HUS1BQ8NHY5 278 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 LIPHQ8WWY8 451 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 PEX13Q92968 403 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 C14orf79Q96F83 325 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 SLC47A1Q96FL8 570 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 RBM17Q96I25 401 aaKnown RBP4.12□□□□□ -1.75
UBR3-206ENST00000444475 LRCH3Q96II8 777 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 USP28Q96RU2 1077 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 DMRTA2Q96SC8 542 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 RAD9AQ99638 391 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 LSG1Q9H089 658 aaKnown RBP4.12□□□□□ -1.75
UBR3-206ENST00000444475 SARS2Q9NP81 518 aaKnown RBP4.12□□□□□ -1.75
UBR3-206ENST00000444475 SMPD3Q9NY59 655 aaPredicted RBP4.12□□□□□ -1.75
UBR3-206ENST00000444475 ZDHHC3Q9NYG2 299 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 RGL1Q9NZL6 768 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 LMCD1Q9NZU5 365 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 HSF4Q9ULV5 492 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 AGAP1Q9UPQ3 857 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 GAB2Q9UQC2 676 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 PCDHB1Q9Y5F3 818 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 MAP3K4Q9Y6R4 1608 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 TMEM232C9JQI7 657 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 IFIT3O14879 490 aaKnown RBP4.12□□□□□ -1.75
UBR3-206ENST00000444475 MSCO60682 206 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 CYTIPO60759 359 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 CLN5O75503 358 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 IPO13O94829 963 aaKnown RBP4.12□□□□□ -1.75
UBR3-206ENST00000444475 GHRP10912 638 aa4.12□□□□□ -1.75
UBR3-206ENST00000444475 UBL4AP11441 157 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms