RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 MBD1Q9UIS9 605 aaPredicted RBP17.13■□□□□ 0.33
CTDSP1-204ENST00000443891 HCN2Q9UL51 889 aa17.13■□□□□ 0.33
CTDSP1-204ENST00000443891 CIZ1Q9ULV3 898 aaPredicted RBP17.13■□□□□ 0.33
CTDSP1-204ENST00000443891 CNOT1A5YKK6 2376 aaKnown RBP17.13■□□□□ 0.33
CTDSP1-204ENST00000443891 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.12■□□□□ 0.33
CTDSP1-204ENST00000443891 PRRT4C9JH25 899 aa17.12■□□□□ 0.33
CTDSP1-204ENST00000443891 CDX4O14627 284 aaPredicted RBP17.12■□□□□ 0.33
CTDSP1-204ENST00000443891 XPO1O14980 1071 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-204ENST00000443891 PMM2O15305 246 aa17.12■□□□□ 0.33
CTDSP1-204ENST00000443891 NOVA1P51513 510 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-204ENST00000443891 BCAT1P54687 386 aa17.12■□□□□ 0.33
CTDSP1-204ENST00000443891 IRX4P78413 519 aa17.12■□□□□ 0.33
CTDSP1-204ENST00000443891 NUCB2P80303 420 aa17.12■□□□□ 0.33
CTDSP1-204ENST00000443891 EIF4HQ15056 248 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-204ENST00000443891 DUOXA1Q1HG43 343 aa17.12■□□□□ 0.33
CTDSP1-204ENST00000443891 EGFLAMQ63HQ2 1017 aa17.12■□□□□ 0.33
CTDSP1-204ENST00000443891 PIGZQ86VD9 579 aa17.12■□□□□ 0.33
CTDSP1-204ENST00000443891 MIB1Q86YT6 1006 aa17.12■□□□□ 0.33
CTDSP1-204ENST00000443891 TMEFF1Q8IYR6 380 aa17.12■□□□□ 0.33
CTDSP1-204ENST00000443891 SCML4Q8N228 414 aa17.12■□□□□ 0.33
CTDSP1-204ENST00000443891 PLD4Q96BZ4 506 aa17.12■□□□□ 0.33
CTDSP1-204ENST00000443891 CALCOCO1Q9P1Z2 691 aa17.12■□□□□ 0.33
CTDSP1-204ENST00000443891 HESX1Q9UBX0 185 aa17.12■□□□□ 0.33
CTDSP1-204ENST00000443891 ARMCX3Q9UH62 379 aaPredicted RBP17.12■□□□□ 0.33
CTDSP1-204ENST00000443891 PILRBQ9UKJ0 227 aa17.12■□□□□ 0.33
CTDSP1-204ENST00000443891 PLXND1Q9Y4D7 1925 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 MYOFQ9NZM1 2061 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 ABCA7Q8IZY2 2146 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 UPK3BL1B0FP48 263 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 UPK3BL2E5RIL1 263 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 MDM4O15151 490 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 TRIM24O15164 1050 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 TIMM44O43615 452 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 ZBED1O96006 694 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 KCNA4P22459 653 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 PTGER3P43115 390 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 TKTL1P51854 596 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 YWHAGP61981 247 aaKnown RBP eCLIP17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 RPL6Q02878 288 aaKnown RBP17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 BST2Q10589 180 aaKnown RBP17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 PNOCQ13519 176 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 STIM1Q13586 685 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 CUL2Q13617 745 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 STARD3Q14849 445 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 SGO2Q562F6 1265 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 TCERG1LQ5VWI1 586 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 FYB2Q5VWT5 728 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 PSAPL1Q6NUJ1 521 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 FOXR2Q6PJQ5 311 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 RSRC2Q7L4I2 434 aaKnown RBP17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 FAM217AQ8IXS0 508 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 ENGASEQ8NFI3 743 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 TATDN2Q93075 761 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 IRX2Q9BZI1 471 aaPredicted RBP17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 MARCH2Q9P0N8 246 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 RASAL2Q9UJF2 1139 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 NUDT5Q9UKK9 219 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 SLC6A14Q9UN76 642 aa17.11■□□□□ 0.33
CTDSP1-204ENST00000443891 MYH10P35580 1976 aa17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 THADAQ6YHU6 1953 aa17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 IGHV1OR15-9A0A0B4J2B8 117 aa17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 PATE3B3GLJ2 98 aa17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 LATS1O95835 1130 aa17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 KLKB1P03952 638 aa17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 SERPINF2P08697 491 aa17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 SETSIPP0DME0 302 aa17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 VDRP11473 427 aa17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 CORO1AP31146 461 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 PDE4CQ08493 712 aa17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 EFEMP1Q12805 493 aa17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 ENPP2Q13822 863 aa17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 BECN1Q14457 450 aa17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 DCAF17Q5H9S7 520 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 SMYD4Q8IYR2 804 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 KCTD13Q8WZ19 329 aa17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 FOXJ1Q92949 421 aa17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 SMARCE1Q969G3 411 aa17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 DHTKD1Q96HY7 919 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 CEP63Q96MT8 703 aa17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 LRRC4Q9HBW1 653 aa17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 ZDHHC4Q9NPG8 344 aa17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 THAP10Q9P2Z0 257 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 SUSD2Q9UGT4 822 aa17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 AGO1Q9UL18 857 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 HBS1LQ9Y450 684 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 NFE2L3Q9Y4A8 694 aa17.1■□□□□ 0.33
CTDSP1-204ENST00000443891 NUP205Q92621 2012 aa17.09■□□□□ 0.33
CTDSP1-204ENST00000443891 EPG5Q9HCE0 2579 aa17.09■□□□□ 0.33
CTDSP1-204ENST00000443891 PSMA7O14818 248 aa17.09■□□□□ 0.33
CTDSP1-204ENST00000443891 P4HA2O15460 535 aa17.09■□□□□ 0.33
CTDSP1-204ENST00000443891 NDUFV2P19404 249 aa17.09■□□□□ 0.33
CTDSP1-204ENST00000443891 HARS2P49590 506 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-204ENST00000443891 MFAP3P55082 362 aa17.09■□□□□ 0.33
CTDSP1-204ENST00000443891 GFPT1Q06210 699 aaPredicted RBP17.09■□□□□ 0.33
CTDSP1-204ENST00000443891 ZNF33AQ06730 810 aa17.09■□□□□ 0.33
CTDSP1-204ENST00000443891 CETN1Q12798 172 aa17.09■□□□□ 0.33
CTDSP1-204ENST00000443891 STILQ15468 1287 aa17.09■□□□□ 0.33
CTDSP1-204ENST00000443891 TRIP4Q15650 581 aaPredicted RBP17.09■□□□□ 0.33
CTDSP1-204ENST00000443891 ST3GAL2Q16842 350 aa17.09■□□□□ 0.33
CTDSP1-204ENST00000443891 CBWD6Q4V339 395 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms