RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 HEATR6Q6AI08 1181 aaKnown RBP7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 PEX26Q7Z412 305 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 LINC01465Q8N7H1 131 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 UCMAQ8WVF2 138 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 SHC3Q92529 594 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 KAT5Q92993 513 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 MYLPFQ96A32 169 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 TRAIPQ9BWF2 469 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 KDM4CQ9H3R0 1056 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 DMAP1Q9NPF5 467 aaPredicted RBP7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 CNTN3Q9P232 1028 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 PRKAG3Q9UGI9 489 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 ASB3Q9Y575 518 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 SLC9A3R1O14745 358 aaPredicted RBP7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 TCEA3O75764 348 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 ADRB2P07550 413 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 ATF2P15336 505 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 NDST1P52848 882 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 ATXN3P54252 364 aaPredicted RBP7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 KLF1Q13351 362 aaPredicted RBP7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 IFI16Q16666 785 aaKnown RBP7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 SCYL2Q6P3W7 929 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 ANKS1BQ7Z6G8 1248 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 DAAM2Q86T65 1068 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 CCDC26Q8TAB7 109 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 FBXO25Q8TCJ0 367 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 TAS1R2Q8TE23 839 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 PARD3BQ8TEW8 1205 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 ATOH1Q92858 354 aaPredicted RBP7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 LRRC45Q96CN5 670 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 ZNF689Q96CS4 500 aaPredicted RBP7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 FBXO44Q9H4M3 255 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 LRRC19Q9H756 370 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 FAM86C2PA6NEL3 165 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 LAMTOR5O43504 91 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 RTN3O95197 1032 aaPredicted RBP7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 MYZAPP0CAP1 466 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 PYGMP11217 842 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 HARS2P49590 506 aaKnown RBP7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 ST8SIA6P61647 398 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 CYP4F8P98187 520 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 SOX4Q06945 474 aaPredicted RBP7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 ENPEPQ07075 957 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 TDGQ13569 410 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 RAB33AQ14088 237 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 PRR23BQ6ZRT6 265 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 RELL1Q8IUW5 271 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 FUKQ8N0W3 1084 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 GOLGA6L1Q8N7Z2 621 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 C1orf127Q8N9H9 656 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 TMC2Q8TDI7 906 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 TAF4BQ92750 862 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 TLR8Q9NR97 1041 aaKnown RBP7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 SPATA6Q9NWH7 488 aaPredicted RBP7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 MTRRQ9UBK8 725 aa7.69□□□□□ -1.18
CDC42BPA-208ENST00000442054 APOEP02649 317 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 GZMAP12544 262 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 GJC1P36383 396 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 EIF3BP55884 814 aaKnown RBP7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 MAGOHP61326 146 aaKnown RBP7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 IFI35P80217 286 aaPredicted RBP7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 EFEMP1Q12805 493 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 GPR17Q13304 367 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 AUHQ13825 339 aaKnown RBP7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 LEXMQ3ZCV2 418 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 VSTM1Q6UX27 236 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 SIX5Q8N196 739 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 RYBPQ8N488 228 aaPredicted RBP7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 TOP6BLQ8N6T0 577 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 UBA3Q8TBC4 463 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 ZSCAN18Q8TBC5 510 aaPredicted RBP7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 MDM1Q8TC05 714 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 SLC2A14Q8TDB8 520 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 MAGOHBQ96A72 148 aaKnown RBP7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 SMARCD1Q96GM5 515 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 XPO6Q96QU8 1125 aaKnown RBP7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 CIPCQ9C0C6 399 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 CCDC113Q9H0I3 377 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 SLC40A1Q9NP59 571 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 IGSF9Q9P2J2 1179 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 CDH7Q9ULB5 785 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 SORCS3Q9UPU3 1222 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 FSCN2O14926 492 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 RIPK2O43353 540 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 USP17L7P0C7H9 530 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 GCAP28676 217 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 DLX2Q07687 328 aaPredicted RBP7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 DHX9Q08211 1270 aaKnown RBP7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 MPP2Q14168 576 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 TEAD2Q15562 447 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 ACCSLQ4AC99 568 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 HECTD3Q5T447 861 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 TAX1BP1Q86VP1 789 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 RNF135Q8IUD6 432 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 ADHFE1Q8IWW8 467 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 SP7Q8TDD2 431 aaPredicted RBP7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 SEMA4AQ9H3S1 761 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 POMKQ9H5K3 350 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 TJP2Q9UDY2 1190 aa7.68□□□□□ -1.18
CDC42BPA-208ENST00000442054 NUDT5Q9UKK9 219 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms