RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 GSDMAQ96QA5 445 aa5.17□□□□□ -1.58
PTPN4-206ENST00000441089 FIZ1Q96SL8 496 aa5.17□□□□□ -1.58
PTPN4-206ENST00000441089 MAP7D2Q96T17 732 aa5.17□□□□□ -1.58
PTPN4-206ENST00000441089 REEP2Q9BRK0 252 aa5.17□□□□□ -1.58
PTPN4-206ENST00000441089 PLA2G2FQ9BZM2 168 aa5.17□□□□□ -1.58
PTPN4-206ENST00000441089 PRORYQ9H606 182 aa5.17□□□□□ -1.58
PTPN4-206ENST00000441089 SSU72Q9NP77 194 aaKnown RBP5.17□□□□□ -1.58
PTPN4-206ENST00000441089 GPRC5CQ9NQ84 441 aa5.17□□□□□ -1.58
PTPN4-206ENST00000441089 XPNPEP1Q9NQW7 623 aa5.17□□□□□ -1.58
PTPN4-206ENST00000441089 ANKEF1Q9NU02 776 aa5.17□□□□□ -1.58
PTPN4-206ENST00000441089 TCEAL9Q9UHQ7 104 aa5.17□□□□□ -1.58
PTPN4-206ENST00000441089 FBXW11Q9UKB1 542 aa5.17□□□□□ -1.58
PTPN4-206ENST00000441089 SLC8A2Q9UPR5 921 aa5.17□□□□□ -1.58
PTPN4-206ENST00000441089 APOBEC2Q9Y235 224 aaKnown RBP5.17□□□□□ -1.58
PTPN4-206ENST00000441089 INPP5FQ9Y2H2 1132 aa5.17□□□□□ -1.58
PTPN4-206ENST00000441089 TNRC6BQ9UPQ9 1833 aaKnown RBP5.17□□□□□ -1.58
PTPN4-206ENST00000441089 CELSR2Q9HCU4 2923 aa5.17□□□□□ -1.58
PTPN4-206ENST00000441089 NBPF19A0A087WUL8 3843 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 NF1P21359 2839 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 PVALEFA0A1B0GWK0 134 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 NRP1O14786 923 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 ZNF263O14978 683 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 MEFVO15553 781 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-206ENST00000441089 AP5Z1O43299 807 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 ZNF623O75123 536 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 HIP1RO75146 1068 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 SMC2O95347 1197 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 VTNP04004 478 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 XRCC6P12956 609 aaKnown RBP eCLIP5.16□□□□□ -1.58
PTPN4-206ENST00000441089 IDEP14735 1019 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 GUCY2CP25092 1073 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 TMOD1P28289 359 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 GBP1P32455 592 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 GDNFP39905 211 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 DPP6P42658 865 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 PRCPP42785 496 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 CCR10P46092 362 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 PXNP49023 591 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-206ENST00000441089 CASP5P51878 434 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 KPNA1P52294 538 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-206ENST00000441089 ZNF131P52739 623 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 ATXN3P54252 364 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-206ENST00000441089 PMS1P54277 932 aaKnown RBP5.16□□□□□ -1.58
PTPN4-206ENST00000441089 LINC00310P59036 64 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 NLRP11P59045 1033 aaKnown RBP5.16□□□□□ -1.58
PTPN4-206ENST00000441089 AMPD3Q01432 767 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 DRP2Q13474 957 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 NCAPHQ15003 741 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 TRIP6Q15654 476 aaKnown RBP5.16□□□□□ -1.58
PTPN4-206ENST00000441089 USP41Q3LFD5 358 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 MTERF2Q49AM1 385 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 XKR9Q5GH70 373 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 XKR3Q5GH77 459 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 ZNF658Q5TYW1 1059 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-206ENST00000441089 FAM160B1Q5W0V3 765 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 TWF2Q6IBS0 349 aaKnown RBP5.16□□□□□ -1.58
PTPN4-206ENST00000441089 MAEAQ7L5Y9 396 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 GPR155Q7Z3F1 870 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 LUZP1Q86V48 1076 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 RALGPS2Q86X27 583 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-206ENST00000441089 SFR1Q86XK3 245 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 DHX40Q8IX18 779 aaKnown RBP5.16□□□□□ -1.58
PTPN4-206ENST00000441089 RNF168Q8IYW5 571 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-206ENST00000441089 METTL13Q8N6R0 699 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 TRIML1Q8N9V2 468 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 KCT2Q8NC54 265 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 ING5Q8WYH8 240 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 MCRS1Q96EZ8 462 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 WBP1Q96G27 269 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 CEP170P1Q96L14 293 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 FCRL3Q96P31 734 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-206ENST00000441089 KRTAP9-8Q9BYQ0 159 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 HSD3B7Q9H2F3 369 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 SLC39A2Q9NP94 309 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 CHST7Q9NS84 486 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 RBM12Q9NTZ6 932 aaKnown RBP5.16□□□□□ -1.58
PTPN4-206ENST00000441089 EXOC1Q9NV70 894 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 PANK4Q9NVE7 773 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 ANO10Q9NW15 660 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 TBC1D7Q9P0N9 293 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 HOOK1Q9UJC3 728 aaKnown RBP5.16□□□□□ -1.58
PTPN4-206ENST00000441089 ZNF638Q14966 1978 aaKnown RBP5.16□□□□□ -1.58
PTPN4-206ENST00000441089 CNTNAP2Q9UHC6 1331 aa5.16□□□□□ -1.58
PTPN4-206ENST00000441089 MYO18AQ92614 2054 aaKnown RBP5.16□□□□□ -1.58
PTPN4-206ENST00000441089 PTPRDP23468 1912 aa5.15□□□□□ -1.58
PTPN4-206ENST00000441089 PLXND1Q9Y4D7 1925 aa5.15□□□□□ -1.58
PTPN4-206ENST00000441089 SPG11Q96JI7 2443 aa5.15□□□□□ -1.58
PTPN4-206ENST00000441089 MUC22E2RYF6 1773 aaPredicted RBP5.15□□□□□ -1.58
PTPN4-206ENST00000441089 IGKV6-21A0A0C4DH24 114 aa5.15□□□□□ -1.59
PTPN4-206ENST00000441089 TRIM49BA6NDI0 452 aa5.15□□□□□ -1.59
PTPN4-206ENST00000441089 E9PAM4 449 aa5.15□□□□□ -1.59
PTPN4-206ENST00000441089 CCL16O15467 120 aa5.15□□□□□ -1.59
PTPN4-206ENST00000441089 MAGEB2O15479 319 aa5.15□□□□□ -1.59
PTPN4-206ENST00000441089 EXTL3O43909 919 aa5.15□□□□□ -1.59
PTPN4-206ENST00000441089 DKC1O60832 514 aaKnown RBP eCLIP5.15□□□□□ -1.59
PTPN4-206ENST00000441089 OPHN1O60890 802 aa5.15□□□□□ -1.59
PTPN4-206ENST00000441089 OFD1O75665 1012 aa5.15□□□□□ -1.59
PTPN4-206ENST00000441089 DDHD2O94830 711 aa5.15□□□□□ -1.59
PTPN4-206ENST00000441089 GP1BBP13224 206 aa5.15□□□□□ -1.59
PTPN4-206ENST00000441089 DARSP14868 501 aaKnown RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms