RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 PCDH19Q8TAB3 1148 aa19.84■□□□□ 0.77
SNX17-203ENST00000440760 ACTL9Q8TC94 416 aa19.84■□□□□ 0.77
SNX17-203ENST00000440760 C2orf15Q8WU43 125 aaKnown RBP19.84■□□□□ 0.77
SNX17-203ENST00000440760 CASP10Q92851 521 aa19.84■□□□□ 0.77
SNX17-203ENST00000440760 FBXO32Q969P5 355 aa19.84■□□□□ 0.77
SNX17-203ENST00000440760 RNF157Q96PX1 679 aa19.84■□□□□ 0.77
SNX17-203ENST00000440760 C10orf88Q9H8K7 445 aa19.84■□□□□ 0.77
SNX17-203ENST00000440760 ABCC13Q9NSE7 274 aa19.84■□□□□ 0.77
SNX17-203ENST00000440760 SFMBT1Q9UHJ3 866 aa19.84■□□□□ 0.77
SNX17-203ENST00000440760 UTP11Q9Y3A2 253 aaKnown RBP19.84■□□□□ 0.77
SNX17-203ENST00000440760 CEP290O15078 2479 aa19.83■□□□□ 0.77
SNX17-203ENST00000440760 TLL1O43897 1013 aa19.83■□□□□ 0.77
SNX17-203ENST00000440760 ERLIN1O75477 346 aa19.83■□□□□ 0.77
SNX17-203ENST00000440760 TRIP13Q15645 432 aaPredicted RBP19.83■□□□□ 0.77
SNX17-203ENST00000440760 BEND6Q5SZJ8 279 aaPredicted RBP19.83■□□□□ 0.77
SNX17-203ENST00000440760 MAP7D3Q8IWC1 876 aa19.83■□□□□ 0.77
SNX17-203ENST00000440760 PQLC3Q8N755 202 aa19.83■□□□□ 0.77
SNX17-203ENST00000440760 KLHL23Q8NBE8 558 aa19.83■□□□□ 0.77
SNX17-203ENST00000440760 PGAP3Q96FM1 320 aaPredicted RBP19.83■□□□□ 0.77
SNX17-203ENST00000440760 ZNF670Q9BS34 389 aa19.83■□□□□ 0.77
SNX17-203ENST00000440760 NEUROG2Q9H2A3 272 aa19.83■□□□□ 0.77
SNX17-203ENST00000440760 FBXO44Q9H4M3 255 aa19.83■□□□□ 0.77
SNX17-203ENST00000440760 ARFGAP3Q9NP61 516 aa19.83■□□□□ 0.77
SNX17-203ENST00000440760 AAASQ9NRG9 546 aa19.83■□□□□ 0.77
SNX17-203ENST00000440760 MAGED2Q9UNF1 606 aaPredicted RBP19.83■□□□□ 0.77
SNX17-203ENST00000440760 EFR3BQ9Y2G0 817 aa19.83■□□□□ 0.77
SNX17-203ENST00000440760 CHD7Q9P2D1 2997 aa19.83■□□□□ 0.76
SNX17-203ENST00000440760 FAM187AA6NFU0 413 aa19.83■□□□□ 0.76
SNX17-203ENST00000440760 MAP3K6O95382 1288 aa19.83■□□□□ 0.76
SNX17-203ENST00000440760 GOT1P17174 413 aa19.83■□□□□ 0.76
SNX17-203ENST00000440760 YWHAQP27348 245 aa19.83■□□□□ 0.76
SNX17-203ENST00000440760 TNFRSF8P28908 595 aa19.83■□□□□ 0.76
SNX17-203ENST00000440760 GGCXP38435 758 aa19.83■□□□□ 0.76
SNX17-203ENST00000440760 TAF10Q12962 218 aa19.83■□□□□ 0.76
SNX17-203ENST00000440760 B4GALNT4Q76KP1 1039 aa19.83■□□□□ 0.76
SNX17-203ENST00000440760 FAM71BQ8TC56 605 aa19.83■□□□□ 0.76
SNX17-203ENST00000440760 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.83■□□□□ 0.76
SNX17-203ENST00000440760 SPATA17Q96L03 361 aa19.83■□□□□ 0.76
SNX17-203ENST00000440760 SLC9A7Q96T83 725 aa19.83■□□□□ 0.76
SNX17-203ENST00000440760 ERP44Q9BS26 406 aa19.83■□□□□ 0.76
SNX17-203ENST00000440760 MAK16Q9BXY0 300 aaKnown RBP19.83■□□□□ 0.76
SNX17-203ENST00000440760 IL37Q9NZH6 218 aa19.83■□□□□ 0.76
SNX17-203ENST00000440760 AFF4Q9UHB7 1163 aaKnown RBP19.83■□□□□ 0.76
SNX17-203ENST00000440760 RASAL2Q9UJF2 1139 aa19.83■□□□□ 0.76
SNX17-203ENST00000440760 MFHAS1Q9Y4C4 1052 aa19.83■□□□□ 0.76
SNX17-203ENST00000440760 LAMA3Q16787 3333 aa19.82■□□□□ 0.76
SNX17-203ENST00000440760 SLC38A8A6NNN8 435 aa19.82■□□□□ 0.76
SNX17-203ENST00000440760 IGLV3-25P01717 112 aa19.82■□□□□ 0.76
SNX17-203ENST00000440760 ECHS1P30084 290 aa19.82■□□□□ 0.76
SNX17-203ENST00000440760 RPL10AP62906 217 aaKnown RBP19.82■□□□□ 0.76
SNX17-203ENST00000440760 BYSLQ13895 437 aaKnown RBP19.82■□□□□ 0.76
SNX17-203ENST00000440760 PPP1R7Q15435 360 aa19.82■□□□□ 0.76
SNX17-203ENST00000440760 DUPD1Q68J44 220 aa19.82■□□□□ 0.76
SNX17-203ENST00000440760 C1orf228Q6PIY5 440 aa19.82■□□□□ 0.76
SNX17-203ENST00000440760 CLP1Q92989 425 aaKnown RBP19.82■□□□□ 0.76
SNX17-203ENST00000440760 FAF2Q96CS3 445 aa19.82■□□□□ 0.76
SNX17-203ENST00000440760 CSPG4P5Q96PW8 444 aa19.82■□□□□ 0.76
SNX17-203ENST00000440760 HTATIP2Q9BUP3 242 aa19.82■□□□□ 0.76
SNX17-203ENST00000440760 RAB17Q9H0T7 212 aa19.82■□□□□ 0.76
SNX17-203ENST00000440760 ZBP1Q9H171 429 aa19.82■□□□□ 0.76
SNX17-203ENST00000440760 CYP4F11Q9HBI6 524 aa19.82■□□□□ 0.76
SNX17-203ENST00000440760 RRN3Q9NYV6 651 aa19.82■□□□□ 0.76
SNX17-203ENST00000440760 CWC15Q9P013 229 aaKnown RBP19.82■□□□□ 0.76
SNX17-203ENST00000440760 SNX24Q9Y343 169 aa19.82■□□□□ 0.76
SNX17-203ENST00000440760 SNX10Q9Y5X0 201 aa19.82■□□□□ 0.76
SNX17-203ENST00000440760 FAM72CH0Y354 149 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 IRAK2O43187 625 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 ABLIM3O94929 683 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 VPS41P49754 854 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 HLTFQ14527 1009 aaKnown RBP eCLIP19.81■□□□□ 0.76
SNX17-203ENST00000440760 EFHC2Q5JST6 749 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 FAM72AQ5TYM5 149 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 FAM72DQ6L9T8 149 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 MON1AQ86VX9 555 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 FAM72BQ86X60 149 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 PLD5Q8N7P1 536 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 ZNF461Q8TAF7 563 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 AENQ8WTP8 325 aaKnown RBP19.81■□□□□ 0.76
SNX17-203ENST00000440760 HNRNPLLQ8WVV9 542 aaKnown RBP19.81■□□□□ 0.76
SNX17-203ENST00000440760 RUNDC3BQ96NL0 473 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 RAD9AQ99638 391 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 TRIM62Q9BVG3 475 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 TKTL2Q9H0I9 626 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 SMOC2Q9H3U7 446 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 MRPL17Q9NRX2 175 aaKnown RBP19.81■□□□□ 0.76
SNX17-203ENST00000440760 HOMER3Q9NSC5 361 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 FBXW11Q9UKB1 542 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 GBF1Q92538 1859 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 FAM92AA1XBS5 289 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 APOC4-APOC2K7ER74 178 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 CREB3O43889 395 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 RTN3O95197 1032 aaPredicted RBP19.81■□□□□ 0.76
SNX17-203ENST00000440760 APOC2P02655 101 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 FAM153BP0C7A2 387 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 ADRA1BP35368 520 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 CXCR3P49682 368 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 VCPP55072 806 aaKnown RBP19.81■□□□□ 0.76
SNX17-203ENST00000440760 OASLQ15646 514 aaKnown RBP19.81■□□□□ 0.76
SNX17-203ENST00000440760 FAM153CQ494X1 144 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 RASIP1Q5U651 963 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms