RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 LRMPQ12912 555 aa17.63■□□□□ 0.41
COL16A1-204ENST00000440437 MORC3Q14149 939 aa17.63■□□□□ 0.41
COL16A1-204ENST00000440437 MAP7D1Q3KQU3 841 aa17.63■□□□□ 0.41
COL16A1-204ENST00000440437 PKDCCQ504Y2 493 aa17.63■□□□□ 0.41
COL16A1-204ENST00000440437 PPM1JQ5JR12 505 aa17.63■□□□□ 0.41
COL16A1-204ENST00000440437 STPG1Q5TH74 334 aa17.63■□□□□ 0.41
COL16A1-204ENST00000440437 FYB2Q5VWT5 728 aa17.63■□□□□ 0.41
COL16A1-204ENST00000440437 LMO3Q8TAP4 145 aa17.63■□□□□ 0.41
COL16A1-204ENST00000440437 HMGB4Q8WW32 186 aa17.63■□□□□ 0.41
COL16A1-204ENST00000440437 BCCIPQ9P287 314 aaKnown RBP eCLIP17.63■□□□□ 0.41
COL16A1-204ENST00000440437 SPTBN2O15020 2390 aa17.63■□□□□ 0.41
COL16A1-204ENST00000440437 A0A1W2PQF6 199 aa17.62■□□□□ 0.41
COL16A1-204ENST00000440437 GADD45BO75293 160 aaPredicted RBP17.62■□□□□ 0.41
COL16A1-204ENST00000440437 ADRB1P08588 477 aa17.62■□□□□ 0.41
COL16A1-204ENST00000440437 CD19P15391 556 aa17.62■□□□□ 0.41
COL16A1-204ENST00000440437 GABRG2P18507 467 aa17.62■□□□□ 0.41
COL16A1-204ENST00000440437 CORO1AP31146 461 aaKnown RBP17.62■□□□□ 0.41
COL16A1-204ENST00000440437 CCDC40Q4G0X9 1142 aa17.62■□□□□ 0.41
COL16A1-204ENST00000440437 KLHL10Q6JEL2 608 aa17.62■□□□□ 0.41
COL16A1-204ENST00000440437 FRMD1Q8N878 549 aa17.62■□□□□ 0.41
COL16A1-204ENST00000440437 NELFBQ8WX92 580 aa17.62■□□□□ 0.41
COL16A1-204ENST00000440437 BHMTQ93088 406 aa17.62■□□□□ 0.41
COL16A1-204ENST00000440437 SPACA7Q96KW9 195 aa17.62■□□□□ 0.41
COL16A1-204ENST00000440437 NT5C1BQ96P26 610 aa17.62■□□□□ 0.41
COL16A1-204ENST00000440437 ACOX2Q99424 681 aa17.62■□□□□ 0.41
COL16A1-204ENST00000440437 GABRG3Q99928 467 aa17.62■□□□□ 0.41
COL16A1-204ENST00000440437 DCLK3Q9C098 648 aa17.62■□□□□ 0.41
COL16A1-204ENST00000440437 PLK2Q9NYY3 685 aa17.62■□□□□ 0.41
COL16A1-204ENST00000440437 MARCH2Q9P0N8 246 aa17.62■□□□□ 0.41
COL16A1-204ENST00000440437 HESX1Q9UBX0 185 aa17.62■□□□□ 0.41
COL16A1-204ENST00000440437 MBD1Q9UIS9 605 aaPredicted RBP17.62■□□□□ 0.41
COL16A1-204ENST00000440437 AGO1Q9UL18 857 aaKnown RBP17.62■□□□□ 0.41
COL16A1-204ENST00000440437 CTNND2Q9UQB3 1225 aa17.62■□□□□ 0.41
COL16A1-204ENST00000440437 CKAP5Q14008 2032 aa17.62■□□□□ 0.41
COL16A1-204ENST00000440437 MUC22E2RYF6 1773 aaPredicted RBP17.61■□□□□ 0.41
COL16A1-204ENST00000440437 P4HA2O15460 535 aa17.61■□□□□ 0.41
COL16A1-204ENST00000440437 HMBSP08397 361 aa17.61■□□□□ 0.41
COL16A1-204ENST00000440437 PAEPP09466 180 aa17.61■□□□□ 0.41
COL16A1-204ENST00000440437 SETSIPP0DME0 302 aa17.61■□□□□ 0.41
COL16A1-204ENST00000440437 CHKAP35790 457 aa17.61■□□□□ 0.41
COL16A1-204ENST00000440437 WASP42768 502 aa17.61■□□□□ 0.41
COL16A1-204ENST00000440437 ADIGQ0VDE8 80 aa17.61■□□□□ 0.41
COL16A1-204ENST00000440437 IL31Q6EBC2 164 aa17.61■□□□□ 0.41
COL16A1-204ENST00000440437 TMEM270Q6UE05 265 aa17.61■□□□□ 0.41
COL16A1-204ENST00000440437 CYP2U1Q7Z449 544 aa17.61■□□□□ 0.41
COL16A1-204ENST00000440437 FAM217AQ8IXS0 508 aa17.61■□□□□ 0.41
COL16A1-204ENST00000440437 SCML4Q8N228 414 aa17.61■□□□□ 0.41
COL16A1-204ENST00000440437 CPXM2Q8N436 756 aa17.61■□□□□ 0.41
COL16A1-204ENST00000440437 KCTD13Q8WZ19 329 aa17.61■□□□□ 0.41
COL16A1-204ENST00000440437 TFAP2BQ92481 460 aa17.61■□□□□ 0.41
COL16A1-204ENST00000440437 DDX1Q92499 740 aaKnown RBP17.61■□□□□ 0.41
COL16A1-204ENST00000440437 NDRG1Q92597 394 aaKnown RBP17.61■□□□□ 0.41
COL16A1-204ENST00000440437 KAT5Q92993 513 aa17.61■□□□□ 0.41
COL16A1-204ENST00000440437 EDEM2Q9BV94 578 aa17.61■□□□□ 0.41
COL16A1-204ENST00000440437 LRRC4Q9HBW1 653 aa17.61■□□□□ 0.41
COL16A1-204ENST00000440437 OLA1Q9NTK5 396 aaKnown RBP17.61■□□□□ 0.41
COL16A1-204ENST00000440437 KIAA1257Q9ULG3 409 aa17.61■□□□□ 0.41
COL16A1-204ENST00000440437 STRIP2Q9ULQ0 834 aa17.61■□□□□ 0.41
COL16A1-204ENST00000440437 SLC27A6Q9Y2P4 619 aa17.61■□□□□ 0.41
COL16A1-204ENST00000440437 SLC12A8A0AV02 714 aa17.6■□□□□ 0.41
COL16A1-204ENST00000440437 LNP1A1A4G5 178 aa17.6■□□□□ 0.41
COL16A1-204ENST00000440437 BICDL2A1A5D9 508 aa17.6■□□□□ 0.41
COL16A1-204ENST00000440437 DHPSP49366 369 aaPredicted RBP17.6■□□□□ 0.41
COL16A1-204ENST00000440437 MARSP56192 900 aaKnown RBP17.6■□□□□ 0.41
COL16A1-204ENST00000440437 TRIP4Q15650 581 aaPredicted RBP17.6■□□□□ 0.41
COL16A1-204ENST00000440437 LCLAT1Q6UWP7 414 aa17.6■□□□□ 0.41
COL16A1-204ENST00000440437 RSRC2Q7L4I2 434 aaKnown RBP17.6■□□□□ 0.41
COL16A1-204ENST00000440437 DENND1CQ8IV53 801 aa17.6■□□□□ 0.41
COL16A1-204ENST00000440437 TRIM59Q8IWR1 403 aa17.6■□□□□ 0.41
COL16A1-204ENST00000440437 CHPFQ8IZ52 775 aa17.6■□□□□ 0.41
COL16A1-204ENST00000440437 PGBD3Q8N328 593 aa17.6■□□□□ 0.41
COL16A1-204ENST00000440437 PPM1KQ8N3J5 372 aa17.6■□□□□ 0.41
COL16A1-204ENST00000440437 UBA3Q8TBC4 463 aa17.6■□□□□ 0.41
COL16A1-204ENST00000440437 PLD4Q96BZ4 506 aa17.6■□□□□ 0.41
COL16A1-204ENST00000440437 ZSWIM1Q9BR11 485 aa17.6■□□□□ 0.41
COL16A1-204ENST00000440437 CALCOCO1Q9P1Z2 691 aa17.6■□□□□ 0.41
COL16A1-204ENST00000440437 PI4KAP42356 2102 aa17.6■□□□□ 0.41
COL16A1-204ENST00000440437 YJEFN3A6XGL0 299 aa17.59■□□□□ 0.41
COL16A1-204ENST00000440437 PATE3B3GLJ2 98 aa17.59■□□□□ 0.41
COL16A1-204ENST00000440437 E7ENQ6 273 aa17.59■□□□□ 0.41
COL16A1-204ENST00000440437 RNF225M0QZC1 329 aaPredicted RBP17.59■□□□□ 0.41
COL16A1-204ENST00000440437 GFRA2O00451 464 aa17.59■□□□□ 0.41
COL16A1-204ENST00000440437 BIN1O00499 593 aa17.59■□□□□ 0.41
COL16A1-204ENST00000440437 GABBR2O75899 941 aa17.59■□□□□ 0.41
COL16A1-204ENST00000440437 NDUFV2P19404 249 aa17.59■□□□□ 0.41
COL16A1-204ENST00000440437 MFAP3P55082 362 aa17.59■□□□□ 0.41
COL16A1-204ENST00000440437 DAOAP59103 153 aa17.59■□□□□ 0.41
COL16A1-204ENST00000440437 BYSLQ13895 437 aaKnown RBP17.59■□□□□ 0.41
COL16A1-204ENST00000440437 SPDYCQ5MJ68 293 aa17.59■□□□□ 0.41
COL16A1-204ENST00000440437 RNF43Q68DV7 783 aa17.59■□□□□ 0.41
COL16A1-204ENST00000440437 KIAA1211LQ6NV74 962 aa17.59■□□□□ 0.41
COL16A1-204ENST00000440437 LPCAT2Q7L5N7 544 aa17.59■□□□□ 0.41
COL16A1-204ENST00000440437 ARHGEF19Q8IW93 802 aa17.59■□□□□ 0.41
COL16A1-204ENST00000440437 IPO4Q8TEX9 1081 aaKnown RBP17.59■□□□□ 0.41
COL16A1-204ENST00000440437 SLC35F5Q8WV83 523 aa17.59■□□□□ 0.41
COL16A1-204ENST00000440437 CNGB3Q9NQW8 809 aa17.59■□□□□ 0.41
COL16A1-204ENST00000440437 CACNA2D2Q9NY47 1150 aa17.59■□□□□ 0.41
COL16A1-204ENST00000440437 CIZ1Q9ULV3 898 aaPredicted RBP17.59■□□□□ 0.41
COL16A1-204ENST00000440437 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.59■□□□□ 0.41
COL16A1-204ENST00000440437 PCDHB4Q9Y5E5 795 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms