RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 LTFP02788 710 aa14.36□□□□□ -0.11
LTBR-202ENST00000440421 TIE1P35590 1138 aa14.36□□□□□ -0.11
LTBR-202ENST00000440421 PTK2Q05397 1052 aa14.36□□□□□ -0.11
LTBR-202ENST00000440421 KRT31Q15323 416 aa14.36□□□□□ -0.11
LTBR-202ENST00000440421 LPAL2Q16609 132 aa14.36□□□□□ -0.11
LTBR-202ENST00000440421 CDKAL1Q5VV42 579 aa14.36□□□□□ -0.11
LTBR-202ENST00000440421 DPY19L2P1Q6NXN4 242 aa14.36□□□□□ -0.11
LTBR-202ENST00000440421 PRR23BQ6ZRT6 265 aa14.36□□□□□ -0.11
LTBR-202ENST00000440421 SYT13Q7L8C5 426 aa14.36□□□□□ -0.11
LTBR-202ENST00000440421 PASD1Q8IV76 773 aa14.36□□□□□ -0.11
LTBR-202ENST00000440421 ALLCQ8N6M5 410 aa14.36□□□□□ -0.11
LTBR-202ENST00000440421 CCDC26Q8TAB7 109 aa14.36□□□□□ -0.11
LTBR-202ENST00000440421 PLD4Q96BZ4 506 aa14.36□□□□□ -0.11
LTBR-202ENST00000440421 XPO6Q96QU8 1125 aaKnown RBP14.36□□□□□ -0.11
LTBR-202ENST00000440421 EPC1Q9H2F5 836 aa14.36□□□□□ -0.11
LTBR-202ENST00000440421 MARK1Q9P0L2 795 aa14.36□□□□□ -0.11
LTBR-202ENST00000440421 WDR35Q9P2L0 1181 aa14.36□□□□□ -0.11
LTBR-202ENST00000440421 SMG5Q9UPR3 1016 aaKnown RBP14.36□□□□□ -0.11
LTBR-202ENST00000440421 ZNF510Q9Y2H8 683 aa14.36□□□□□ -0.11
LTBR-202ENST00000440421 FHOD1Q9Y613 1164 aa14.36□□□□□ -0.11
LTBR-202ENST00000440421 E5RJQ4 531 aa14.35□□□□□ -0.11
LTBR-202ENST00000440421 HRO43593 1189 aa14.35□□□□□ -0.11
LTBR-202ENST00000440421 CACNG3O60359 315 aa14.35□□□□□ -0.11
LTBR-202ENST00000440421 KLF8O95600 359 aaPredicted RBP14.35□□□□□ -0.11
LTBR-202ENST00000440421 HOXA6P31267 233 aa14.35□□□□□ -0.11
LTBR-202ENST00000440421 ACADSBP45954 432 aa14.35□□□□□ -0.11
LTBR-202ENST00000440421 HARS2P49590 506 aaKnown RBP14.35□□□□□ -0.11
LTBR-202ENST00000440421 MYL5Q02045 173 aa14.35□□□□□ -0.11
LTBR-202ENST00000440421 PDCLQ13371 301 aa14.35□□□□□ -0.11
LTBR-202ENST00000440421 DRAP1Q14919 205 aaPredicted RBP14.35□□□□□ -0.11
LTBR-202ENST00000440421 TRIP4Q15650 581 aaPredicted RBP14.35□□□□□ -0.11
LTBR-202ENST00000440421 C10orf76Q5T2E6 689 aa14.35□□□□□ -0.11
LTBR-202ENST00000440421 KLHDC7AQ5VTJ3 777 aa14.35□□□□□ -0.11
LTBR-202ENST00000440421 GRAMD4Q6IC98 578 aa14.35□□□□□ -0.11
LTBR-202ENST00000440421 SLC47A2Q86VL8 602 aa14.35□□□□□ -0.11
LTBR-202ENST00000440421 WDR5BQ86VZ2 330 aa14.35□□□□□ -0.11
LTBR-202ENST00000440421 DCLK2Q8N568 766 aa14.35□□□□□ -0.11
LTBR-202ENST00000440421 TXNDC5Q8NBS9 432 aaKnown RBP14.35□□□□□ -0.11
LTBR-202ENST00000440421 STK32AQ8WU08 396 aa14.35□□□□□ -0.11
LTBR-202ENST00000440421 FAM149B1Q96BN6 582 aa14.35□□□□□ -0.11
LTBR-202ENST00000440421 P2RY11Q96G91 374 aa14.35□□□□□ -0.11
LTBR-202ENST00000440421 SLC4A5Q9BY07 1137 aa14.35□□□□□ -0.11
LTBR-202ENST00000440421 HBS1LQ9Y450 684 aaKnown RBP14.35□□□□□ -0.11
LTBR-202ENST00000440421 A0A0A0MRY4 1105 aa14.34□□□□□ -0.11
LTBR-202ENST00000440421 PAPSS1O43252 624 aaPredicted RBP14.34□□□□□ -0.11
LTBR-202ENST00000440421 TPM2P07951 284 aa14.34□□□□□ -0.11
LTBR-202ENST00000440421 NCAM1P13591 858 aa14.34□□□□□ -0.11
LTBR-202ENST00000440421 CLCN1P35523 988 aa14.34□□□□□ -0.11
LTBR-202ENST00000440421 KRT9P35527 623 aa14.34□□□□□ -0.11
LTBR-202ENST00000440421 CHKAP35790 457 aa14.34□□□□□ -0.11
LTBR-202ENST00000440421 TNFRSF4P43489 277 aa14.34□□□□□ -0.11
LTBR-202ENST00000440421 KIR2DL1P43626 348 aaPredicted RBP14.34□□□□□ -0.11
LTBR-202ENST00000440421 RPL34P49207 117 aaKnown RBP14.34□□□□□ -0.11
LTBR-202ENST00000440421 KLK7P49862 253 aa14.34□□□□□ -0.11
LTBR-202ENST00000440421 MRPS21P82921 87 aaKnown RBP14.34□□□□□ -0.11
LTBR-202ENST00000440421 TYRO3Q06418 890 aa14.34□□□□□ -0.11
LTBR-202ENST00000440421 SIM2Q14190 667 aaPredicted RBP14.34□□□□□ -0.11
LTBR-202ENST00000440421 MEA1Q16626 185 aa14.34□□□□□ -0.11
LTBR-202ENST00000440421 PREPLQ4J6C6 727 aaPredicted RBP14.34□□□□□ -0.11
LTBR-202ENST00000440421 CAVIN1Q6NZI2 390 aaKnown RBP14.34□□□□□ -0.11
LTBR-202ENST00000440421 MSANTD2Q6P1R3 559 aa14.34□□□□□ -0.11
LTBR-202ENST00000440421 TOGARAM2Q6ZUX3 1019 aa14.34□□□□□ -0.11
LTBR-202ENST00000440421 FAM71AQ8IYT1 594 aa14.34□□□□□ -0.11
LTBR-202ENST00000440421 WDTC1Q8N5D0 677 aa14.34□□□□□ -0.11
LTBR-202ENST00000440421 CAMKK1Q8N5S9 505 aa14.34□□□□□ -0.11
LTBR-202ENST00000440421 TERB1Q8NA31 727 aa14.34□□□□□ -0.11
LTBR-202ENST00000440421 PLCB1Q9NQ66 1216 aa14.34□□□□□ -0.11
LTBR-202ENST00000440421 NCDNQ9UBB6 729 aa14.34□□□□□ -0.11
LTBR-202ENST00000440421 TJP2Q9UDY2 1190 aa14.34□□□□□ -0.11
LTBR-202ENST00000440421 RAB23Q9ULC3 237 aa14.34□□□□□ -0.11
LTBR-202ENST00000440421 MMP17Q9ULZ9 603 aa14.34□□□□□ -0.11
LTBR-202ENST00000440421 NAALADL1Q9UQQ1 740 aa14.34□□□□□ -0.11
LTBR-202ENST00000440421 VPS13AQ96RL7 3174 aa14.33□□□□□ -0.12
LTBR-202ENST00000440421 SGK1O00141 431 aa14.33□□□□□ -0.12
LTBR-202ENST00000440421 SART1O43290 800 aaKnown RBP14.33□□□□□ -0.12
LTBR-202ENST00000440421 TSPAN3O60637 253 aa14.33□□□□□ -0.12
LTBR-202ENST00000440421 APBB3O95704 486 aa14.33□□□□□ -0.12
LTBR-202ENST00000440421 FYNP06241 537 aa14.33□□□□□ -0.12
LTBR-202ENST00000440421 UCHL3P15374 230 aa14.33□□□□□ -0.12
LTBR-202ENST00000440421 CNR2P34972 360 aa14.33□□□□□ -0.12
LTBR-202ENST00000440421 DGKGP49619 791 aa14.33□□□□□ -0.12
LTBR-202ENST00000440421 FKBP15Q5T1M5 1219 aa14.33□□□□□ -0.12
LTBR-202ENST00000440421 FYB2Q5VWT5 728 aa14.33□□□□□ -0.12
LTBR-202ENST00000440421 NUDT18Q6ZVK8 323 aa14.33□□□□□ -0.12
LTBR-202ENST00000440421 CEP68Q76N32 757 aa14.33□□□□□ -0.12
LTBR-202ENST00000440421 TMEM110Q86TL2 294 aa14.33□□□□□ -0.12
LTBR-202ENST00000440421 IL17RCQ8NAC3 791 aa14.33□□□□□ -0.12
LTBR-202ENST00000440421 C1orf131Q8NDD1 294 aaKnown RBP14.33□□□□□ -0.12
LTBR-202ENST00000440421 TSTD1Q8NFU3 115 aa14.33□□□□□ -0.12
LTBR-202ENST00000440421 ADAM32Q8TC27 787 aa14.33□□□□□ -0.12
LTBR-202ENST00000440421 DQX1Q8TE96 717 aaKnown RBP14.33□□□□□ -0.12
LTBR-202ENST00000440421 RUBCNQ92622 972 aa14.33□□□□□ -0.12
LTBR-202ENST00000440421 CPXM1Q96SM3 734 aa14.33□□□□□ -0.12
LTBR-202ENST00000440421 NAA15Q9BXJ9 866 aaKnown RBP14.33□□□□□ -0.12
LTBR-202ENST00000440421 PCDHGC3Q9UN70 934 aa14.33□□□□□ -0.12
LTBR-202ENST00000440421 FAM170AA1A519 330 aa14.32□□□□□ -0.12
LTBR-202ENST00000440421 PRRT4C9JH25 899 aa14.32□□□□□ -0.12
LTBR-202ENST00000440421 CAPN9O14815 690 aa14.32□□□□□ -0.12
LTBR-202ENST00000440421 AXIN1O15169 862 aa14.32□□□□□ -0.12
LTBR-202ENST00000440421 PENKP01210 267 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms