RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 PRR23CQ6ZRP0 262 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 C11orf74Q86VG3 221 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 DENND1CQ8IV53 801 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 PHTF2Q8N3S3 785 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 MDGA1Q8NFP4 955 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 HMGB4Q8WW32 186 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 EDEM1Q92611 657 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 PLD4Q96BZ4 506 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 SPACA7Q96KW9 195 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 ARRDC1-AS1Q9H2J1 176 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 CNGB3Q9NQW8 809 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 PLK2Q9NYY3 685 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 INVSQ9Y283 1065 aa20.79■□□□□ 0.92
SHROOM1-204ENST00000440118 TCRBV21S2A2A0A5A6 115 aa20.78■□□□□ 0.92
SHROOM1-204ENST00000440118 PIK3R2O00459 728 aa20.78■□□□□ 0.92
SHROOM1-204ENST00000440118 DCLK1O15075 740 aa20.78■□□□□ 0.92
SHROOM1-204ENST00000440118 EPN2O95208 641 aa20.78■□□□□ 0.92
SHROOM1-204ENST00000440118 KIR2DL1P43626 348 aaPredicted RBP20.78■□□□□ 0.92
SHROOM1-204ENST00000440118 MTIF2P46199 727 aaKnown RBP20.78■□□□□ 0.92
SHROOM1-204ENST00000440118 HARS2P49590 506 aaKnown RBP20.78■□□□□ 0.92
SHROOM1-204ENST00000440118 AASDHQ4L235 1098 aaPredicted RBP20.78■□□□□ 0.92
SHROOM1-204ENST00000440118 PM20D1Q6GTS8 502 aa20.78■□□□□ 0.92
SHROOM1-204ENST00000440118 FMNL3Q8IVF7 1028 aa20.78■□□□□ 0.92
SHROOM1-204ENST00000440118 MLKLQ8NB16 471 aa20.78■□□□□ 0.92
SHROOM1-204ENST00000440118 LMO3Q8TAP4 145 aa20.78■□□□□ 0.92
SHROOM1-204ENST00000440118 KCNV2Q8TDN2 545 aa20.78■□□□□ 0.92
SHROOM1-204ENST00000440118 KCTD13Q8WZ19 329 aa20.78■□□□□ 0.92
SHROOM1-204ENST00000440118 TFAP2BQ92481 460 aa20.78■□□□□ 0.92
SHROOM1-204ENST00000440118 UBE2TQ9NPD8 197 aaPredicted RBP20.78■□□□□ 0.92
SHROOM1-204ENST00000440118 NUP205Q92621 2012 aa20.77■□□□□ 0.92
SHROOM1-204ENST00000440118 A0A0A0MRY4 1105 aa20.77■□□□□ 0.92
SHROOM1-204ENST00000440118 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.77■□□□□ 0.92
SHROOM1-204ENST00000440118 TRIM24O15164 1050 aa20.77■□□□□ 0.92
SHROOM1-204ENST00000440118 HOXB2P14652 356 aa20.77■□□□□ 0.92
SHROOM1-204ENST00000440118 CCDC6Q16204 474 aa20.77■□□□□ 0.92
SHROOM1-204ENST00000440118 CNGA2Q16280 664 aa20.77■□□□□ 0.92
SHROOM1-204ENST00000440118 PLK5Q496M5 336 aa20.77■□□□□ 0.92
SHROOM1-204ENST00000440118 BSPRYQ5W0U4 402 aa20.77■□□□□ 0.92
SHROOM1-204ENST00000440118 TMEM92Q6UXU6 159 aa20.77■□□□□ 0.92
SHROOM1-204ENST00000440118 CHPFQ8IZ52 775 aa20.77■□□□□ 0.92
SHROOM1-204ENST00000440118 CRACR2AQ9BSW2 395 aa20.77■□□□□ 0.92
SHROOM1-204ENST00000440118 CLSTN2Q9H4D0 955 aa20.77■□□□□ 0.92
SHROOM1-204ENST00000440118 ABCC13Q9NSE7 274 aa20.77■□□□□ 0.92
SHROOM1-204ENST00000440118 CACNA1AO00555 2505 aa20.77■□□□□ 0.92
SHROOM1-204ENST00000440118 YJEFN3A6XGL0 299 aa20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 E7ENQ6 273 aa20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 RNF225M0QZC1 329 aaPredicted RBP20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 CALCAP01258 141 aa20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 KLKB1P03952 638 aa20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 TGM1P22735 817 aa20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 USP8P40818 1118 aa20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 WASP42768 502 aa20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 MFAP3P55082 362 aa20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 CREB5Q02930 508 aa20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 RASSF3Q86WH2 238 aa20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 FAM114A1Q8IWE2 563 aa20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 ABCA7Q8IZY2 2146 aa20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 NETO1Q8TDF5 533 aa20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 DDI1Q8WTU0 396 aa20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 ZC3H10Q96K80 434 aaKnown RBP20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 FAM81BQ96LP2 452 aa20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 NUP62CLQ9H1M0 184 aa20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 ST7Q9NRC1 585 aa20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 SFMBT1Q9UHJ3 866 aa20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 DACH1Q9UI36 760 aa20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 AGO1Q9UL18 857 aaKnown RBP20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 PCDHGA5Q9Y5G8 931 aa20.76■□□□□ 0.91
SHROOM1-204ENST00000440118 MAP3K13O43283 966 aa20.75■□□□□ 0.91
SHROOM1-204ENST00000440118 MED7O43513 233 aa20.75■□□□□ 0.91
SHROOM1-204ENST00000440118 ADAM23O75077 832 aa20.75■□□□□ 0.91
SHROOM1-204ENST00000440118 NTSR1P30989 418 aa20.75■□□□□ 0.91
SHROOM1-204ENST00000440118 MPLP40238 635 aa20.75■□□□□ 0.91
SHROOM1-204ENST00000440118 DAOAP59103 153 aa20.75■□□□□ 0.91
SHROOM1-204ENST00000440118 PKDCCQ504Y2 493 aa20.75■□□□□ 0.91
SHROOM1-204ENST00000440118 EGFLAMQ63HQ2 1017 aa20.75■□□□□ 0.91
SHROOM1-204ENST00000440118 PMF1Q6P1K2 205 aa20.75■□□□□ 0.91
SHROOM1-204ENST00000440118 GBP6Q6ZN66 633 aa20.75■□□□□ 0.91
SHROOM1-204ENST00000440118 TOGARAM2Q6ZUX3 1019 aa20.75■□□□□ 0.91
SHROOM1-204ENST00000440118 ENOSF1Q7L5Y1 443 aa20.75■□□□□ 0.91
SHROOM1-204ENST00000440118 KREMEN1Q96MU8 473 aa20.75■□□□□ 0.91
SHROOM1-204ENST00000440118 DUSP15Q9H1R2 295 aaPredicted RBP20.75■□□□□ 0.91
SHROOM1-204ENST00000440118 DLL3Q9NYJ7 618 aa20.75■□□□□ 0.91
SHROOM1-204ENST00000440118 HBS1LQ9Y450 684 aaKnown RBP20.75■□□□□ 0.91
SHROOM1-204ENST00000440118 FBXO21O94952 628 aa20.74■□□□□ 0.91
SHROOM1-204ENST00000440118 LETM1O95202 739 aaPredicted RBP20.74■□□□□ 0.91
SHROOM1-204ENST00000440118 HNRNPLP14866 589 aaKnown RBP eCLIP20.74■□□□□ 0.91
SHROOM1-204ENST00000440118 ZNF132P52740 706 aa20.74■□□□□ 0.91
SHROOM1-204ENST00000440118 BYSLQ13895 437 aaKnown RBP20.74■□□□□ 0.91
SHROOM1-204ENST00000440118 TRIM65Q6PJ69 517 aa20.74■□□□□ 0.91
SHROOM1-204ENST00000440118 BHLHA9Q7RTU4 235 aa20.74■□□□□ 0.91
SHROOM1-204ENST00000440118 SLC35F5Q8WV83 523 aa20.74■□□□□ 0.91
SHROOM1-204ENST00000440118 IRGQQ8WZA9 623 aa20.74■□□□□ 0.91
SHROOM1-204ENST00000440118 MIS12Q9H081 205 aa20.74■□□□□ 0.91
SHROOM1-204ENST00000440118 PLXND1Q9Y4D7 1925 aa20.74■□□□□ 0.91
SHROOM1-204ENST00000440118 MSI1O43347 362 aaKnown RBP20.73■□□□□ 0.91
SHROOM1-204ENST00000440118 THAP12O43422 761 aa20.73■□□□□ 0.91
SHROOM1-204ENST00000440118 LTFP02788 710 aa20.73■□□□□ 0.91
SHROOM1-204ENST00000440118 GNA15P30679 374 aa20.73■□□□□ 0.91
SHROOM1-204ENST00000440118 DHPSP49366 369 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms