RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 E5RJQ4 531 aa24.71■■□□□ 1.55
VARS-217ENST00000440048 K7EQS6 105 aa24.71■■□□□ 1.55
VARS-217ENST00000440048 BPIFB4P59827 614 aa24.71■■□□□ 1.55
VARS-217ENST00000440048 PDCLQ13371 301 aa24.71■■□□□ 1.55
VARS-217ENST00000440048 TRIP4Q15650 581 aaPredicted RBP24.71■■□□□ 1.55
VARS-217ENST00000440048 MSANTD2Q6P1R3 559 aa24.71■■□□□ 1.55
VARS-217ENST00000440048 TPGS1Q6ZTW0 290 aa24.71■■□□□ 1.55
VARS-217ENST00000440048 ASCL5Q7RTU5 278 aa24.71■■□□□ 1.55
VARS-217ENST00000440048 NAT16Q8N8M0 369 aa24.71■■□□□ 1.55
VARS-217ENST00000440048 GOLGA1Q92805 767 aa24.71■■□□□ 1.55
VARS-217ENST00000440048 PLD4Q96BZ4 506 aa24.71■■□□□ 1.55
VARS-217ENST00000440048 STK33Q9BYT3 514 aa24.71■■□□□ 1.55
VARS-217ENST00000440048 ZSCAN32Q9NX65 697 aa24.71■■□□□ 1.55
VARS-217ENST00000440048 AGO1Q9UL18 857 aaKnown RBP24.71■■□□□ 1.55
VARS-217ENST00000440048 HBS1LQ9Y450 684 aaKnown RBP24.71■■□□□ 1.55
VARS-217ENST00000440048 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.7■■□□□ 1.54
VARS-217ENST00000440048 CHURC1-FNTBB4DL54 471 aa24.7■■□□□ 1.54
VARS-217ENST00000440048 K7ESF4 209 aa24.7■■□□□ 1.54
VARS-217ENST00000440048 PAPSS1O43252 624 aaPredicted RBP24.7■■□□□ 1.54
VARS-217ENST00000440048 SART1O43290 800 aaKnown RBP24.7■■□□□ 1.54
VARS-217ENST00000440048 ATG13O75143 517 aa24.7■■□□□ 1.54
VARS-217ENST00000440048 FYNP06241 537 aa24.7■■□□□ 1.54
VARS-217ENST00000440048 KRT9P35527 623 aa24.7■■□□□ 1.54
VARS-217ENST00000440048 KDSRQ06136 332 aa24.7■■□□□ 1.54
VARS-217ENST00000440048 APTXQ7Z2E3 356 aaKnown RBP24.7■■□□□ 1.54
VARS-217ENST00000440048 DENND1CQ8IV53 801 aa24.7■■□□□ 1.54
VARS-217ENST00000440048 SFTPA1Q8IWL2 248 aa24.7■■□□□ 1.54
VARS-217ENST00000440048 RPLP0P6Q8NHW5 317 aa24.7■■□□□ 1.54
VARS-217ENST00000440048 FUCA2Q9BTY2 467 aa24.7■■□□□ 1.54
VARS-217ENST00000440048 BBS2Q9BXC9 721 aa24.7■■□□□ 1.54
VARS-217ENST00000440048 FAM126AQ9BYI3 521 aaPredicted RBP24.7■■□□□ 1.54
VARS-217ENST00000440048 LHX5Q9H2C1 402 aa24.7■■□□□ 1.54
VARS-217ENST00000440048 ARHGEF4Q9NR80 690 aa24.7■■□□□ 1.54
VARS-217ENST00000440048 FAM207AQ9NSI2 230 aaPredicted RBP24.7■■□□□ 1.54
VARS-217ENST00000440048 MARK1Q9P0L2 795 aa24.7■■□□□ 1.54
VARS-217ENST00000440048 WDR35Q9P2L0 1181 aa24.7■■□□□ 1.54
VARS-217ENST00000440048 SIK3Q9Y2K2 1263 aa24.7■■□□□ 1.54
VARS-217ENST00000440048 PCDHGA2Q9Y5H1 932 aa24.7■■□□□ 1.54
VARS-217ENST00000440048 NEDD8-MDP1E9PL57 170 aa24.69■■□□□ 1.54
VARS-217ENST00000440048 MSI1O43347 362 aaKnown RBP24.69■■□□□ 1.54
VARS-217ENST00000440048 TULP3O75386 442 aa24.69■■□□□ 1.54
VARS-217ENST00000440048 KAT7O95251 611 aa24.69■■□□□ 1.54
VARS-217ENST00000440048 APODP05090 189 aa24.69■■□□□ 1.54
VARS-217ENST00000440048 ATP1A3P13637 1013 aa24.69■■□□□ 1.54
VARS-217ENST00000440048 DHX40Q8IX18 779 aaKnown RBP24.69■■□□□ 1.54
VARS-217ENST00000440048 PHTF2Q8N3S3 785 aa24.69■■□□□ 1.54
VARS-217ENST00000440048 ZBTB44Q8NCP5 570 aa24.69■■□□□ 1.54
VARS-217ENST00000440048 TJP2Q9UDY2 1190 aa24.69■■□□□ 1.54
VARS-217ENST00000440048 OTOGLQ3ZCN5 2332 aa24.68■■□□□ 1.54
VARS-217ENST00000440048 MYO18AQ92614 2054 aaKnown RBP24.68■■□□□ 1.54
VARS-217ENST00000440048 A0A0A0MRY4 1105 aa24.68■■□□□ 1.54
VARS-217ENST00000440048 ANTXRLA6NF34 631 aa24.68■■□□□ 1.54
VARS-217ENST00000440048 F8VZ95 297 aa24.68■■□□□ 1.54
VARS-217ENST00000440048 EPHB6O15197 1021 aa24.68■■□□□ 1.54
VARS-217ENST00000440048 LMNAP02545 664 aaKnown RBP24.68■■□□□ 1.54
VARS-217ENST00000440048 TYRP14679 529 aa24.68■■□□□ 1.54
VARS-217ENST00000440048 CYP11B1P15538 503 aa24.68■■□□□ 1.54
VARS-217ENST00000440048 PTMSP20962 102 aa24.68■■□□□ 1.54
VARS-217ENST00000440048 HOXC13P31276 330 aa24.68■■□□□ 1.54
VARS-217ENST00000440048 GRIA2P42262 883 aa24.68■■□□□ 1.54
VARS-217ENST00000440048 NRLP54845 237 aa24.68■■□□□ 1.54
VARS-217ENST00000440048 SEC13P55735 322 aa24.68■■□□□ 1.54
VARS-217ENST00000440048 POLR2FP61218 127 aaKnown RBP24.68■■□□□ 1.54
VARS-217ENST00000440048 SYCP1Q15431 976 aa24.68■■□□□ 1.54
VARS-217ENST00000440048 C1orf131Q8NDD1 294 aaKnown RBP24.68■■□□□ 1.54
VARS-217ENST00000440048 CCDC26Q8TAB7 109 aa24.68■■□□□ 1.54
VARS-217ENST00000440048 USP33Q8TEY7 942 aa24.68■■□□□ 1.54
VARS-217ENST00000440048 ATRIPQ8WXE1 791 aa24.68■■□□□ 1.54
VARS-217ENST00000440048 FAM149B1Q96BN6 582 aa24.68■■□□□ 1.54
VARS-217ENST00000440048 PPP1R13BQ96KQ4 1090 aa24.68■■□□□ 1.54
VARS-217ENST00000440048 CPXM1Q96SM3 734 aa24.68■■□□□ 1.54
VARS-217ENST00000440048 POLR3BQ9NW08 1133 aaPredicted RBP24.68■■□□□ 1.54
VARS-217ENST00000440048 DEC1Q9P2X7 70 aa24.68■■□□□ 1.54
VARS-217ENST00000440048 SMTNL1A8MU46 457 aa24.67■■□□□ 1.54
VARS-217ENST00000440048 CACNG3O60359 315 aa24.67■■□□□ 1.54
VARS-217ENST00000440048 NCAM1P13591 858 aa24.67■■□□□ 1.54
VARS-217ENST00000440048 CHKAP35790 457 aa24.67■■□□□ 1.54
VARS-217ENST00000440048 HARS2P49590 506 aaKnown RBP24.67■■□□□ 1.54
VARS-217ENST00000440048 ZNF165P49910 485 aa24.67■■□□□ 1.54
VARS-217ENST00000440048 UBXN1Q04323 297 aa24.67■■□□□ 1.54
VARS-217ENST00000440048 DMWDQ09019 674 aa24.67■■□□□ 1.54
VARS-217ENST00000440048 BHMTQ93088 406 aa24.67■■□□□ 1.54
VARS-217ENST00000440048 P2RY11Q96G91 374 aa24.67■■□□□ 1.54
VARS-217ENST00000440048 XPO6Q96QU8 1125 aaKnown RBP24.67■■□□□ 1.54
VARS-217ENST00000440048 DNAJC17Q9NVM6 304 aaKnown RBP24.67■■□□□ 1.54
VARS-217ENST00000440048 NAALADL1Q9UQQ1 740 aa24.67■■□□□ 1.54
VARS-217ENST00000440048 FRYLO94915 3013 aa24.67■■□□□ 1.54
VARS-217ENST00000440048 SYCE3A1L190 88 aa24.66■■□□□ 1.54
VARS-217ENST00000440048 TRIM24O15164 1050 aa24.66■■□□□ 1.54
VARS-217ENST00000440048 LILRB5O75023 590 aa24.66■■□□□ 1.54
VARS-217ENST00000440048 TNFRSF4P43489 277 aa24.66■■□□□ 1.54
VARS-217ENST00000440048 C2orf27AQ580R0 203 aa24.66■■□□□ 1.54
VARS-217ENST00000440048 BEND5Q7L4P6 421 aa24.66■■□□□ 1.54
VARS-217ENST00000440048 FAM217AQ8IXS0 508 aa24.66■■□□□ 1.54
VARS-217ENST00000440048 CPXM2Q8N436 756 aa24.66■■□□□ 1.54
VARS-217ENST00000440048 DQX1Q8TE96 717 aaKnown RBP24.66■■□□□ 1.54
VARS-217ENST00000440048 PCMTD1Q96MG8 357 aaPredicted RBP24.66■■□□□ 1.54
VARS-217ENST00000440048 NOX5Q96PH1 765 aa24.66■■□□□ 1.54
VARS-217ENST00000440048 NLRC4Q9NPP4 1024 aa24.66■■□□□ 1.54
VARS-217ENST00000440048 PLK2Q9NYY3 685 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms