RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 WASHC2DQ5SRD0 308 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 SESTD1Q86VW0 696 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 CHSY1Q86X52 802 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 CCDC185Q8N715 623 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 PDCD7Q8N8D1 485 aaKnown RBP14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 NLGN2Q8NFZ4 835 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 ZNF398Q8TD17 642 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 TRIM6Q9C030 488 aaPredicted RBP14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 PHACTR1Q9C0D0 580 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 ASB7Q9H672 318 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 SLC6A3Q01959 620 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 THOC5Q13769 683 aaKnown RBP14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 ZNF618Q5T7W0 954 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 ZNF534Q76KX8 674 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 FAM131BQ86XD5 332 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 SLC25A41Q8N5S1 370 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 SHKBP1Q8TBC3 707 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 DEPDC1BQ8WUY9 529 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 NRG4Q8WWG1 115 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 FAM161BQ96MY7 647 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 FAM49AQ9H0Q0 323 aaPredicted RBP14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 DCLRE1BQ9H816 532 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 SEPT10Q9P0V9 454 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 MGAMO43451 1857 aa14.03□□□□□ -0.16
HERPUD1-204ENST00000439977 WDR27A2RRH5 827 aa14.02□□□□□ -0.16
HERPUD1-204ENST00000439977 SMAPO00193 183 aa14.02□□□□□ -0.16
HERPUD1-204ENST00000439977 TBX10O75333 385 aa14.02□□□□□ -0.16
HERPUD1-204ENST00000439977 LMO2P25791 158 aa14.02□□□□□ -0.16
HERPUD1-204ENST00000439977 ATICP31939 592 aa14.02□□□□□ -0.16
HERPUD1-204ENST00000439977 PGM1P36871 562 aa14.02□□□□□ -0.16
HERPUD1-204ENST00000439977 UBAP2LQ14157 1087 aaKnown RBP14.02□□□□□ -0.16
HERPUD1-204ENST00000439977 TTLL4Q14679 1199 aa14.02□□□□□ -0.16
HERPUD1-204ENST00000439977 SOWAHAQ2M3V2 549 aa14.02□□□□□ -0.16
HERPUD1-204ENST00000439977 ANO7Q6IWH7 933 aa14.02□□□□□ -0.16
HERPUD1-204ENST00000439977 EXOC8Q8IYI6 725 aa14.02□□□□□ -0.16
HERPUD1-204ENST00000439977 ATXN7L3BQ96GX2 97 aa14.02□□□□□ -0.16
HERPUD1-204ENST00000439977 SIGLEC10Q96LC7 697 aa14.02□□□□□ -0.16
HERPUD1-204ENST00000439977 SHCBP1LQ9BZQ2 653 aa14.02□□□□□ -0.16
HERPUD1-204ENST00000439977 TLE6Q9H808 572 aa14.02□□□□□ -0.16
HERPUD1-204ENST00000439977 NMRK1Q9NWW6 199 aa14.02□□□□□ -0.16
HERPUD1-204ENST00000439977 LRRC42Q9Y546 428 aa14.02□□□□□ -0.16
HERPUD1-204ENST00000439977 WASF2Q9Y6W5 498 aa14.02□□□□□ -0.16
HERPUD1-204ENST00000439977 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.02□□□□□ -0.17
HERPUD1-204ENST00000439977 A6NJR5 290 aa14.02□□□□□ -0.17
HERPUD1-204ENST00000439977 TSPAN1O60635 241 aa14.02□□□□□ -0.17
HERPUD1-204ENST00000439977 GOT1P17174 413 aa14.02□□□□□ -0.17
HERPUD1-204ENST00000439977 KCNA4P22459 653 aa14.02□□□□□ -0.17
HERPUD1-204ENST00000439977 GTF2A2P52657 109 aa14.02□□□□□ -0.17
HERPUD1-204ENST00000439977 INCA1Q0VD86 236 aa14.02□□□□□ -0.17
HERPUD1-204ENST00000439977 PDK2Q15119 407 aa14.02□□□□□ -0.17
HERPUD1-204ENST00000439977 SNX30Q5VWJ9 437 aa14.02□□□□□ -0.17
HERPUD1-204ENST00000439977 TEX9Q8N6V9 391 aa14.02□□□□□ -0.17
HERPUD1-204ENST00000439977 PPP1R14CQ8TAE6 165 aa14.02□□□□□ -0.17
HERPUD1-204ENST00000439977 DNAJC9Q8WXX5 260 aa14.02□□□□□ -0.17
HERPUD1-204ENST00000439977 FAXDC2Q96IV6 333 aa14.02□□□□□ -0.17
HERPUD1-204ENST00000439977 ARHGEF4Q9NR80 690 aa14.02□□□□□ -0.17
HERPUD1-204ENST00000439977 HESX1Q9UBX0 185 aa14.02□□□□□ -0.17
HERPUD1-204ENST00000439977 DCAF8L1A6NGE4 600 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 MEI4A8MW99 385 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 A8MXQ7 604 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 AKAP5P24588 427 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 L1CAMP32004 1257 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 ADCYAP1R1P41586 468 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 TUBP50607 506 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 CCNG1P51959 295 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 TNFAIP2Q03169 654 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 SLC9A4Q6AI14 798 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 CAPRIN2Q6IMN6 1127 aaKnown RBP14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 TP53INP2Q8IXH6 220 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 SLC35F5Q8WV83 523 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 MPHOSPH6Q99547 160 aaKnown RBP14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 KLK14Q9P0G3 267 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 SIP14410 1827 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 SMNDC1O75940 238 aaKnown RBP eCLIP14.01□□□□□ -0.177e-11■■■□□ 15.1
HERPUD1-204ENST00000439977 KRT38O76015 456 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 RABGGTBP53611 331 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 RPL10AP62906 217 aaKnown RBP14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 PITX1P78337 314 aaPredicted RBP14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 ARHGAP1Q07960 439 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 LGSNQ5TDP6 509 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 ARMCX2Q7L311 632 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 SULF1Q8IWU6 871 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.01□□□□□ -0.172e-6■□□□□ 9.2
HERPUD1-204ENST00000439977 ADGRF2Q8IZF7 708 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 ENDOVQ8N8Q3 282 aaKnown RBP14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 RBM15BQ8NDT2 890 aaKnown RBP14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 FBXO41Q8TF61 875 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 UCMAQ8WVF2 138 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 FAM149B1Q96BN6 582 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 EBNA1BP2Q99848 306 aaKnown RBP14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 EIF2AQ9BY44 585 aaKnown RBP14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 YIPF3Q9GZM5 350 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 BATF3Q9NR55 127 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 AP4E1Q9UPM8 1137 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 BCLAF3A2AJT9 711 aaKnown RBP14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 PRR5-ARHGAP8B1AHC4 643 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 ITM2AO43736 263 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 SPAG6O75602 509 aa14.01□□□□□ -0.17
HERPUD1-204ENST00000439977 RARBP10826 455 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms