RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 PRRT4C9JH25 899 aa21.29■■□□□ 1
NCKIPSD-206ENST00000439518 PENKP01210 267 aaPredicted RBP21.29■■□□□ 1
NCKIPSD-206ENST00000439518 PAEPP09466 180 aa21.29■■□□□ 1
NCKIPSD-206ENST00000439518 NTSR1P30989 418 aa21.29■■□□□ 1
NCKIPSD-206ENST00000439518 CORO1AP31146 461 aaKnown RBP21.29■■□□□ 1
NCKIPSD-206ENST00000439518 AASDHQ4L235 1098 aaPredicted RBP21.29■■□□□ 1
NCKIPSD-206ENST00000439518 LCLAT1Q6UWP7 414 aa21.29■■□□□ 1
NCKIPSD-206ENST00000439518 TRIM59Q8IWR1 403 aa21.29■■□□□ 1
NCKIPSD-206ENST00000439518 UBA3Q8TBC4 463 aa21.29■■□□□ 1
NCKIPSD-206ENST00000439518 KCTD13Q8WZ19 329 aa21.29■■□□□ 1
NCKIPSD-206ENST00000439518 TFAP2BQ92481 460 aa21.29■■□□□ 1
NCKIPSD-206ENST00000439518 NDRG1Q92597 394 aaKnown RBP21.29■■□□□ 1
NCKIPSD-206ENST00000439518 LRRC4Q9HBW1 653 aa21.29■■□□□ 1
NCKIPSD-206ENST00000439518 STRIP2Q9ULQ0 834 aa21.29■■□□□ 1
NCKIPSD-206ENST00000439518 CTNND2Q9UQB3 1225 aa21.29■■□□□ 1
NCKIPSD-206ENST00000439518 TCRBV21S2A2A0A5A6 115 aa21.28■■□□□ 1
NCKIPSD-206ENST00000439518 SETSIPP0DME0 302 aa21.28■■□□□ 1
NCKIPSD-206ENST00000439518 CHKAP35790 457 aa21.28■■□□□ 1
NCKIPSD-206ENST00000439518 DGKGP49619 791 aa21.28■■□□□ 1
NCKIPSD-206ENST00000439518 MARSP56192 900 aaKnown RBP21.28■■□□□ 1
NCKIPSD-206ENST00000439518 CREB5Q02930 508 aa21.28■■□□□ 1
NCKIPSD-206ENST00000439518 EGFLAMQ63HQ2 1017 aa21.28■■□□□ 1
NCKIPSD-206ENST00000439518 TMEM270Q6UE05 265 aa21.28■■□□□ 1
NCKIPSD-206ENST00000439518 RSRC2Q7L4I2 434 aaKnown RBP21.28■■□□□ 1
NCKIPSD-206ENST00000439518 HMGB4Q8WW32 186 aa21.28■■□□□ 1
NCKIPSD-206ENST00000439518 KAT5Q92993 513 aa21.28■■□□□ 1
NCKIPSD-206ENST00000439518 BHMTQ93088 406 aa21.28■■□□□ 1
NCKIPSD-206ENST00000439518 ZSWIM1Q9BR11 485 aa21.28■■□□□ 1
NCKIPSD-206ENST00000439518 CD248Q9HCU0 757 aa21.28■■□□□ 1
NCKIPSD-206ENST00000439518 PLK2Q9NYY3 685 aa21.28■■□□□ 1
NCKIPSD-206ENST00000439518 AGO1Q9UL18 857 aaKnown RBP21.28■■□□□ 1
NCKIPSD-206ENST00000439518 A0A1W2PQF6 199 aa21.27■■□□□ 1
NCKIPSD-206ENST00000439518 RNF225M0QZC1 329 aaPredicted RBP21.27■■□□□ 1
NCKIPSD-206ENST00000439518 CAVIN2O95810 425 aa21.27■■□□□ 1
NCKIPSD-206ENST00000439518 GNA14O95837 355 aa21.27■■□□□ 1
NCKIPSD-206ENST00000439518 HMBSP08397 361 aa21.27■■□□□ 1
NCKIPSD-206ENST00000439518 ADIGQ0VDE8 80 aa21.27■■□□□ 1
NCKIPSD-206ENST00000439518 CETN1Q12798 172 aa21.27■■□□□ 1
NCKIPSD-206ENST00000439518 MAP7D1Q3KQU3 841 aa21.27■■□□□ 1
NCKIPSD-206ENST00000439518 FYB2Q5VWT5 728 aa21.27■■□□□ 1
NCKIPSD-206ENST00000439518 SCML4Q8N228 414 aa21.27■■□□□ 1
NCKIPSD-206ENST00000439518 PPM1KQ8N3J5 372 aa21.27■■□□□ 1
NCKIPSD-206ENST00000439518 RLN3Q8WXF3 142 aa21.27■■□□□ 1
NCKIPSD-206ENST00000439518 ACOX2Q99424 681 aa21.27■■□□□ 1
NCKIPSD-206ENST00000439518 BCCIPQ9P287 314 aaKnown RBP eCLIP21.27■■□□□ 1
NCKIPSD-206ENST00000439518 SLC27A6Q9Y2P4 619 aa21.27■■□□□ 1
NCKIPSD-206ENST00000439518 PCDHB4Q9Y5E5 795 aa21.27■■□□□ 1
NCKIPSD-206ENST00000439518 SLC12A8A0AV02 714 aa21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 YJEFN3A6XGL0 299 aa21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 E7ENQ6 273 aa21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 TM4SF5O14894 197 aa21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 GABBR2O75899 941 aa21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 HOXB2P14652 356 aa21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 GABRG2P18507 467 aa21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 WASP42768 502 aa21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 STX17P56962 302 aa21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 KCNH2Q12809 1159 aa21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 PAK1Q13153 545 aa21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 TRIP4Q15650 581 aaPredicted RBP21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 CNGA2Q16280 664 aa21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 BSPRYQ5W0U4 402 aa21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 TCEAL6Q6IPX3 200 aa21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 DENND1CQ8IV53 801 aa21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 FAM217AQ8IXS0 508 aa21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 EHBP1Q8NDI1 1231 aa21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 SLC35F5Q8WV83 523 aa21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 TCEAL3Q969E4 200 aa21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 IPO9Q96P70 1041 aaKnown RBP21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 GABRG3Q99928 467 aa21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 OLA1Q9NTK5 396 aaKnown RBP21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 MBD1Q9UIS9 605 aaPredicted RBP21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 THADAQ6YHU6 1953 aa21.26■□□□□ 0.99
NCKIPSD-206ENST00000439518 TPRP12270 2363 aaKnown RBP21.25■□□□□ 0.99
NCKIPSD-206ENST00000439518 ZNF132P52740 706 aa21.25■□□□□ 0.99
NCKIPSD-206ENST00000439518 GCNT1Q02742 428 aa21.25■□□□□ 0.99
NCKIPSD-206ENST00000439518 STPG1Q5TH74 334 aa21.25■□□□□ 0.99
NCKIPSD-206ENST00000439518 ARHGEF19Q8IW93 802 aa21.25■□□□□ 0.99
NCKIPSD-206ENST00000439518 CHPFQ8IZ52 775 aa21.25■□□□□ 0.99
NCKIPSD-206ENST00000439518 SIX6OS1Q8N1H7 587 aa21.25■□□□□ 0.99
NCKIPSD-206ENST00000439518 CPXM2Q8N436 756 aa21.25■□□□□ 0.99
NCKIPSD-206ENST00000439518 FRMD1Q8N878 549 aa21.25■□□□□ 0.99
NCKIPSD-206ENST00000439518 TRIML1Q8N9V2 468 aa21.25■□□□□ 0.99
NCKIPSD-206ENST00000439518 PLD4Q96BZ4 506 aa21.25■□□□□ 0.99
NCKIPSD-206ENST00000439518 SPACA7Q96KW9 195 aa21.25■□□□□ 0.99
NCKIPSD-206ENST00000439518 SRRTQ9BXP5 876 aaKnown RBP21.25■□□□□ 0.99
NCKIPSD-206ENST00000439518 CNGB3Q9NQW8 809 aa21.25■□□□□ 0.99
NCKIPSD-206ENST00000439518 GON4LQ3T8J9 2241 aa21.25■□□□□ 0.99
NCKIPSD-206ENST00000439518 NUP205Q92621 2012 aa21.24■□□□□ 0.99
NCKIPSD-206ENST00000439518 MFAP3P55082 362 aa21.24■□□□□ 0.99
NCKIPSD-206ENST00000439518 DAOAP59103 153 aa21.24■□□□□ 0.99
NCKIPSD-206ENST00000439518 BYSLQ13895 437 aaKnown RBP21.24■□□□□ 0.99
NCKIPSD-206ENST00000439518 STILQ15468 1287 aa21.24■□□□□ 0.99
NCKIPSD-206ENST00000439518 SDE2Q6IQ49 451 aa21.24■□□□□ 0.99
NCKIPSD-206ENST00000439518 PMF1Q6P1K2 205 aa21.24■□□□□ 0.99
NCKIPSD-206ENST00000439518 RRAGAQ7L523 313 aa21.24■□□□□ 0.99
NCKIPSD-206ENST00000439518 LPCAT2Q7L5N7 544 aa21.24■□□□□ 0.99
NCKIPSD-206ENST00000439518 CYP2U1Q7Z449 544 aa21.24■□□□□ 0.99
NCKIPSD-206ENST00000439518 PGBD3Q8N328 593 aa21.24■□□□□ 0.99
NCKIPSD-206ENST00000439518 RBBP8NLQ8NC74 664 aaPredicted RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms