RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 CDC26Q8NHZ8 85 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 TCP10LQ8TDR4 215 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 USP13Q92995 863 aaPredicted RBP6.56□□□□□ -1.36
BDNF-211ENST00000439476 PWWP2AQ96N64 755 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 HNRNPABQ99729 332 aaKnown RBP6.56□□□□□ -1.36
BDNF-211ENST00000439476 SLCO1B3Q9NPD5 702 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 SAR1AQ9NR31 198 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.56□□□□□ -1.36
BDNF-211ENST00000439476 KIAA1522Q9P206 1035 aaPredicted RBP6.56□□□□□ -1.36
BDNF-211ENST00000439476 LOC100653049A0A140TA62 436 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 F5H423 210 aaPredicted RBP6.56□□□□□ -1.36
BDNF-211ENST00000439476 TGFB1I1O43294 461 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 STRNO43815 780 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 KRT34O76011 436 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 PRKCBP05771 671 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 TAL1P17542 331 aaPredicted RBP6.56□□□□□ -1.36
BDNF-211ENST00000439476 PRKACAP17612 351 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 SKIV2L2P42285 1042 aaKnown RBP6.56□□□□□ -1.36
BDNF-211ENST00000439476 RGS4P49798 205 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 POU5F1BQ06416 359 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 ZNF268Q14587 947 aaPredicted RBP6.56□□□□□ -1.36
BDNF-211ENST00000439476 SLC45A4Q5BKX6 768 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 HYIQ5T013 277 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 BTBD8Q5XKL5 378 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 TWF2Q6IBS0 349 aaKnown RBP6.56□□□□□ -1.36
BDNF-211ENST00000439476 MFSD5Q6N075 450 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 RRM2BQ7LG56 351 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 SGCDQ92629 289 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 EME1Q96AY2 570 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 ELMO3Q96BJ8 720 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 SLC10A4Q96EP9 437 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 RUBCNLQ9H714 662 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 PRMT7Q9NVM4 692 aaPredicted RBP6.56□□□□□ -1.36
BDNF-211ENST00000439476 SCN3BQ9NY72 215 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 APPL1Q9UKG1 709 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 CDV3Q9UKY7 258 aaKnown RBP6.56□□□□□ -1.36
BDNF-211ENST00000439476 CDYLQ9Y232 598 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 ACTL7BQ9Y614 415 aa6.56□□□□□ -1.36
BDNF-211ENST00000439476 COL5A2P05997 1499 aaPredicted RBP6.56□□□□□ -1.36
BDNF-211ENST00000439476 LRRC72A6NJI9 287 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 PRSS47A8MTI9 375 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 FAM25EA8MYX2 175 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 NKRFO15226 690 aaKnown RBP eCLIP6.55□□□□□ -1.36
BDNF-211ENST00000439476 GLRA3O75311 464 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 RAD17O75943 681 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 PAHP00439 452 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 GH1P01241 217 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 BGNP21810 368 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 GRK2P25098 689 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 ADRA1DP25100 572 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 MAP4P27816 1152 aaKnown RBP6.55□□□□□ -1.36
BDNF-211ENST00000439476 SHMT1P34896 483 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 RPA3P35244 121 aaPredicted RBP6.55□□□□□ -1.36
BDNF-211ENST00000439476 DLG4P78352 724 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 PURAQ00577 322 aaKnown RBP6.55□□□□□ -1.36
BDNF-211ENST00000439476 VEPH1Q14D04 833 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 SNX17Q15036 470 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 TFDP3Q5H9I0 405 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 STRIP1Q5VSL9 837 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 NUDT18Q6ZVK8 323 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 OTOP1Q7RTM1 612 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 SLFN11Q7Z7L1 901 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 LRRC6Q86X45 466 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 OR6P1Q8NGX9 317 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 AGR3Q8TD06 166 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 PPP2R3CQ969Q6 453 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 COQ7Q99807 217 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 TEX13BQ9BXU2 312 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 NIF3L1Q9GZT8 377 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 SMARCAD1Q9H4L7 1026 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 CATSPERBQ9H7T0 1116 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 TMEM59LQ9UK28 342 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 ADGRA3Q8IWK6 1321 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 KDM3BQ7LBC6 1761 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 TM9SF1O15321 606 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 ZW10O43264 779 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 EXTL3O43909 919 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 ADCY3O60266 1144 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 HIST1H2AGP0C0S8 130 aaPredicted RBP6.55□□□□□ -1.36
BDNF-211ENST00000439476 PDGFRAP16234 1089 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 HIST1H2ADP20671 130 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 ATP6V1C1P21283 382 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 GSTT1P30711 240 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 SSTR1P30872 391 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 STAT5BP51692 787 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 RUNX1T1Q06455 604 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 IER5Q5VY09 327 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 ANKS3Q6ZW76 656 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 C1orf186Q6ZWK4 172 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 ZCCHC9Q8N567 271 aaKnown RBP6.55□□□□□ -1.36
BDNF-211ENST00000439476 PGBD4Q96DM1 585 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 HIST1H2AHQ96KK5 128 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 HIST1H2AJQ99878 128 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 EGFL8Q99944 293 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 H2AFJQ9BTM1 129 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 KATNAL1Q9BW62 490 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 SHCBP1LQ9BZQ2 653 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 IKZF4Q9H2S9 585 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 NALCNQ8IZF0 1738 aa6.55□□□□□ -1.36
BDNF-211ENST00000439476 TISP43B9A030 160 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms