RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 HSPBAP1Q96EW2 488 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 B3GNT5Q9BYG0 378 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 MMADHCQ9H3L0 296 aaPredicted RBP10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 SYNPO2Q9UMS6 1093 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 COL24A1Q17RW2 1714 aa10.29□□□□□ -0.76
CDC42SE1-202ENST00000439374 GOLGA8TH3BQL2 631 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 DNALI1O14645 258 aaPredicted RBP10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 DCXO43602 365 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 TMEM63AO94886 807 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 IL1R2P27930 398 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 MIPP30301 263 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 MAGEA10P43363 369 aaPredicted RBP10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 LMNB2Q03252 620 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 TRIM72Q6ZMU5 477 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 TRIM67Q6ZTA4 783 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 CRLF3Q8IUI8 442 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 APOBEC3FQ8IUX4 373 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 AFG1LQ8WV93 481 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 NDRG1Q92597 394 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 HPDLQ96IR7 371 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 MAGEB5Q9BZ81 275 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 DHX33Q9H6R0 707 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 DNAJC16Q9Y2G8 782 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 DNAH12Q6ZR08 3092 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 TMEM191CA6NGB0 347 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 BOLA2-SMG1P6H3BVE0 249 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 C2CD2LO14523 706 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 ZBED1O96006 694 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 LMNAP02545 664 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 VAV1P15498 845 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 MMP8P22894 467 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 PMLP29590 882 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 CNGA3Q16281 694 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 RHBDF2Q6PJF5 856 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 BRSK2Q8IWQ3 736 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 RDM1Q8NG50 284 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 DIS3LQ8TF46 1054 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 E2F7Q96AV8 911 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 FBXL18Q96ME1 805 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 PCYT2Q99447 389 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 ST6GALNAC4Q9H4F1 302 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 TXNRD2Q9NNW7 524 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 DNAAF2Q9NVR5 837 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 RGS17Q9UGC6 210 aaPredicted RBP10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 RREB1Q92766 1687 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 ARFGEF1Q9Y6D6 1849 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 GPR25O00155 361 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 PSTPIP1O43586 416 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 ASS1P00966 412 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 MX2P20592 715 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 AKAP5P24588 427 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 SNRPFP62306 86 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 AP1B1Q10567 949 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 ZC3H12AQ5D1E8 599 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 FAM219BQ5XKK7 198 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 KIAA0319LQ8IZA0 1049 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 ZCCHC9Q8N567 271 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 ICA1LQ8NDH6 482 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 RXFP2Q8WXD0 754 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 TMA16Q96EY4 203 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 AGAP3Q96P47 875 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 MPHOSPH6Q99547 160 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 SPATA16Q9BXB7 569 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 MRPL1Q9BYD6 325 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 AVENQ9NQS1 362 aaPredicted RBP10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 CHCHD3Q9NX63 227 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 RBMX2Q9Y388 322 aaKnown RBP10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 V9GYQ6 96 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 NHSQ6T4R5 1651 aa10.28□□□□□ -0.76
CDC42SE1-202ENST00000439374 CLUHO75153 1309 aa10.27□□□□□ -0.76
CDC42SE1-202ENST00000439374 CXorf49A8MYA2 514 aaPredicted RBP10.27□□□□□ -0.76
CDC42SE1-202ENST00000439374 ATXN1P54253 815 aaKnown RBP10.27□□□□□ -0.76
CDC42SE1-202ENST00000439374 BCAR1P56945 870 aa10.27□□□□□ -0.76
CDC42SE1-202ENST00000439374 C6orf52Q5T4I8 152 aa10.27□□□□□ -0.76
CDC42SE1-202ENST00000439374 CATSPER4Q7RTX7 472 aa10.27□□□□□ -0.76
CDC42SE1-202ENST00000439374 ZNF677Q86XU0 584 aa10.27□□□□□ -0.76
CDC42SE1-202ENST00000439374 TNS4Q8IZW8 715 aa10.27□□□□□ -0.76
CDC42SE1-202ENST00000439374 PPWD1Q96BP3 646 aaKnown RBP10.27□□□□□ -0.76
CDC42SE1-202ENST00000439374 PIWIL1Q96J94 861 aaKnown RBP10.27□□□□□ -0.76
CDC42SE1-202ENST00000439374 ACO2Q99798 780 aaKnown RBP10.27□□□□□ -0.76
CDC42SE1-202ENST00000439374 CAAP1Q9H8G2 361 aa10.27□□□□□ -0.76
CDC42SE1-202ENST00000439374 COPS7BQ9H9Q2 264 aaPredicted RBP10.27□□□□□ -0.76
CDC42SE1-202ENST00000439374 ZNF358Q9NW07 568 aa10.27□□□□□ -0.76
CDC42SE1-202ENST00000439374 HESX1Q9UBX0 185 aa10.27□□□□□ -0.76
CDC42SE1-202ENST00000439374 MICAL3Q7RTP6 2002 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 STBD1O95210 358 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 CD1EP15812 388 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 RPL22P35268 128 aaKnown RBP10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 EFNA5P52803 228 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 NDST1P52848 882 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 VCPP55072 806 aaKnown RBP10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 YWHAEP62258 255 aaKnown RBP10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 C1QBPQ07021 282 aaKnown RBP10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 IER5Q5VY09 327 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 METTL7BQ6UX53 244 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 MARK2Q7KZI7 788 aaKnown RBP10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 OR6Y1Q8NGX8 325 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 PHACTR1Q9C0D0 580 aa10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 XPOTO43592 962 aaKnown RBP10.27□□□□□ -0.77
CDC42SE1-202ENST00000439374 ZC3H11AO75152 810 aaKnown RBP eCLIP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms