RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 THUMPD3Q9BV44 507 aaKnown RBP15.41■□□□□ 0.06
TSC2-206ENST00000439117 R3HDM2Q9Y2K5 976 aaKnown RBP15.41■□□□□ 0.06
TSC2-206ENST00000439117 AK5Q9Y6K8 562 aa15.41■□□□□ 0.06
TSC2-206ENST00000439117 MYOM1P52179 1685 aa15.41■□□□□ 0.06
TSC2-206ENST00000439117 FAM25AB3EWG3 89 aa15.41■□□□□ 0.06
TSC2-206ENST00000439117 FAM25CB3EWG5 89 aa15.41■□□□□ 0.06
TSC2-206ENST00000439117 FAM25GB3EWG6 89 aa15.41■□□□□ 0.06
TSC2-206ENST00000439117 KLHL41O60662 606 aa15.41■□□□□ 0.06
TSC2-206ENST00000439117 SMNDC1O75940 238 aaKnown RBP eCLIP15.41■□□□□ 0.061e-6■■■■□ 19.5
TSC2-206ENST00000439117 SULT1E1P49888 294 aa15.41■□□□□ 0.06
TSC2-206ENST00000439117 TRIP4Q15650 581 aaPredicted RBP15.41■□□□□ 0.06
TSC2-206ENST00000439117 BOLA3Q53S33 107 aa15.41■□□□□ 0.06
TSC2-206ENST00000439117 MFSD4BQ5TF39 518 aa15.41■□□□□ 0.06
TSC2-206ENST00000439117 NET1Q7Z628 596 aaPredicted RBP15.41■□□□□ 0.06
TSC2-206ENST00000439117 ZNF75CPQ92670 426 aaPredicted RBP15.41■□□□□ 0.06
TSC2-206ENST00000439117 OTULINQ96BN8 352 aa15.41■□□□□ 0.06
TSC2-206ENST00000439117 PLEKHA5Q9HAU0 1116 aa15.41■□□□□ 0.06
TSC2-206ENST00000439117 TCF7L2Q9NQB0 619 aa15.41■□□□□ 0.06
TSC2-206ENST00000439117 TJP2Q9UDY2 1190 aa15.41■□□□□ 0.06
TSC2-206ENST00000439117 E9PBE3 544 aa15.41■□□□□ 0.06
TSC2-206ENST00000439117 GARTP22102 1010 aa15.41■□□□□ 0.06
TSC2-206ENST00000439117 PSMB9P28065 219 aa15.41■□□□□ 0.06
TSC2-206ENST00000439117 CACNB2Q08289 660 aaPredicted RBP15.41■□□□□ 0.06
TSC2-206ENST00000439117 NEDD8Q15843 81 aa15.41■□□□□ 0.06
TSC2-206ENST00000439117 GPAT2Q6NUI2 795 aa15.41■□□□□ 0.06
TSC2-206ENST00000439117 CBWD2Q8IUF1 395 aa15.41■□□□□ 0.06
TSC2-206ENST00000439117 THAP1Q9NVV9 213 aa15.41■□□□□ 0.06
TSC2-206ENST00000439117 ADAM30Q9UKF2 790 aa15.41■□□□□ 0.06
TSC2-206ENST00000439117 PDE9AO76083 593 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 CPA3P15088 417 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 PPATQ06203 517 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 NAPEPLDQ6IQ20 393 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 EZH1Q92800 747 aaPredicted RBP15.4■□□□□ 0.06
TSC2-206ENST00000439117 P2RX7Q99572 595 aaKnown RBP15.4■□□□□ 0.06
TSC2-206ENST00000439117 KLHL3Q9UH77 587 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 PRR23AA6NEV1 266 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 SNTNA6NMZ2 147 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 TAL1P17542 331 aaPredicted RBP15.4■□□□□ 0.06
TSC2-206ENST00000439117 PTGER2P43116 358 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 TAF6P49848 677 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 TRIM71Q2Q1W2 868 aaKnown RBP15.4■□□□□ 0.06
TSC2-206ENST00000439117 AGAP9Q5VTM2 703 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 TTC23LQ6PF05 361 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 DCP1BQ8IZD4 617 aaKnown RBP15.4■□□□□ 0.06
TSC2-206ENST00000439117 DHRSXQ8N5I4 330 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 C9orf16Q9BUW7 83 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 FHDC1Q9C0D6 1143 aaPredicted RBP15.4■□□□□ 0.06
TSC2-206ENST00000439117 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.4■□□□□ 0.06
TSC2-206ENST00000439117 ITGB3P05106 788 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 ALADP13716 330 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 DRD4P21917 467 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 KRT20P35900 424 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 ACADSBP45954 432 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 SNX17Q15036 470 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 PRMT9Q6P2P2 845 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 USP50Q70EL3 339 aaPredicted RBP15.4■□□□□ 0.06
TSC2-206ENST00000439117 TAS2R42Q7RTR8 314 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 ZNF720Q7Z2F6 126 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 TCP10LQ8TDR4 215 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 REXO4Q9GZR2 422 aaKnown RBP15.4■□□□□ 0.06
TSC2-206ENST00000439117 ACTL7BQ9Y614 415 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 IMPDH2P12268 514 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 GTF2H1P32780 548 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 THPOP40225 353 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 PARP6Q2NL67 630 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 CRY2Q49AN0 593 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 EARS2Q5JPH6 523 aaKnown RBP15.4■□□□□ 0.06
TSC2-206ENST00000439117 TRPC4APQ8TEL6 797 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 CAPSLQ8WWF8 208 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 MKL1Q969V6 931 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 DGCR14Q96DF8 476 aaKnown RBP15.4■□□□□ 0.06
TSC2-206ENST00000439117 KCNK4Q9NYG8 393 aa15.4■□□□□ 0.06
TSC2-206ENST00000439117 RSL24D1Q9UHA3 163 aaKnown RBP15.4■□□□□ 0.06
TSC2-206ENST00000439117 FAM95CA0A1B0GW59 222 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 OPLAHO14841 1288 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 ADCY6O43306 1168 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 SERPINE1P05121 402 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 PDK3Q15120 406 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 EXD1Q8NHP7 514 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 CYP2W1Q8TAV3 490 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 VPS33AQ96AX1 596 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 CBWD1Q9BRT8 395 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 GALNT8Q9NY28 637 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.39■□□□□ 0.05
TSC2-206ENST00000439117 SNPHO15079 494 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 NKRFO15226 690 aaKnown RBP eCLIP15.39■□□□□ 0.05
TSC2-206ENST00000439117 CYTH3O43739 400 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 GNL1P36915 607 aaPredicted RBP15.39■□□□□ 0.05
TSC2-206ENST00000439117 OR1G1P47890 313 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 MEA1Q16626 185 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 MPZL3Q6UWV2 235 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 SLC30A10Q6XR72 485 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 NIPA1Q7RTP0 329 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 RRAGCQ9HB90 399 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 MANSC4A6NHS7 340 aaPredicted RBP15.39■□□□□ 0.05
TSC2-206ENST00000439117 ZNF235Q14590 738 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 NCF4Q15080 339 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 CNGA2Q16280 664 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 ANO4Q32M45 955 aa15.39■□□□□ 0.05
TSC2-206ENST00000439117 TFDP3Q5H9I0 405 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms