RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 SPG21Q9NZD8 308 aa10.63□□□□□ -0.71
SHPRH-206ENST00000438092 EIF2S1P05198 315 aaKnown RBP10.63□□□□□ -0.71
SHPRH-206ENST00000438092 KCNA3P22001 575 aa10.63□□□□□ -0.71
SHPRH-206ENST00000438092 CSNK2BP67870 215 aa10.63□□□□□ -0.71
SHPRH-206ENST00000438092 CYP24A1Q07973 514 aa10.63□□□□□ -0.71
SHPRH-206ENST00000438092 TRPM8Q7Z2W7 1104 aa10.63□□□□□ -0.71
SHPRH-206ENST00000438092 SETD3Q86TU7 594 aaPredicted RBP10.63□□□□□ -0.71
SHPRH-206ENST00000438092 CASKIN2Q8WXE0 1202 aa10.63□□□□□ -0.71
SHPRH-206ENST00000438092 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.63□□□□□ -0.71
SHPRH-206ENST00000438092 EXO5Q9H790 373 aa10.63□□□□□ -0.71
SHPRH-206ENST00000438092 MTO1Q9Y2Z2 717 aaKnown RBP10.63□□□□□ -0.71
SHPRH-206ENST00000438092 SERPINB8P50452 374 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 DGKZQ13574 1117 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 TSGA10IPQ3SY00 556 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 KIAA1324Q6UXG2 1013 aaKnown RBP10.62□□□□□ -0.71
SHPRH-206ENST00000438092 RTFDC1Q9BY42 306 aaPredicted RBP10.62□□□□□ -0.71
SHPRH-206ENST00000438092 ALDH8A1Q9H2A2 487 aaPredicted RBP10.62□□□□□ -0.71
SHPRH-206ENST00000438092 VANGL2Q9ULK5 521 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 C16orf96A6NNT2 1141 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 M0R3G1 203 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 TOMM70O94826 608 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 SPATA31D3P0C874 917 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 RRM2P31350 389 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 NR6A1Q15406 480 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 NFIL3Q16649 462 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 AASDHQ4L235 1098 aaPredicted RBP10.62□□□□□ -0.71
SHPRH-206ENST00000438092 SPATA31D4Q6ZUB0 917 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 ADAM2Q99965 735 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 OMDQ99983 421 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 IQGAP3Q86VI3 1631 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 LACTBL1A8MY62 500 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 NDUFS2O75306 463 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 PYGMP11217 842 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 MUTP22033 750 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 SERPINB3P29508 390 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 TRAF2Q12933 501 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 ACVR2BQ13705 512 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 CXCL17Q6UXB2 119 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 GLT6D1Q7Z4J2 308 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 UXS1Q8NBZ7 420 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 CATSPER2Q96P56 530 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 INTS13Q9NVM9 706 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 HEY2Q9UBP5 337 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 TRPC5OSA6NMA1 111 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 KRT16P08779 473 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 AMPD1P23109 780 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 NOS3P29474 1203 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 HIRAP54198 1017 aaPredicted RBP10.62□□□□□ -0.71
SHPRH-206ENST00000438092 GJC2Q5T442 439 aaPredicted RBP10.62□□□□□ -0.71
SHPRH-206ENST00000438092 XRRA1Q6P2D8 792 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 ELOVL6Q9H5J4 265 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.62□□□□□ -0.71
SHPRH-206ENST00000438092 SLC9A8Q9Y2E8 581 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 CRYL1Q9Y2S2 319 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 IL1R1P14778 569 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 CCR1P32246 355 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 PLK1P53350 603 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 PRKAA1Q13131 559 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 EIF2B5Q13144 721 aaKnown RBP10.62□□□□□ -0.71
SHPRH-206ENST00000438092 CAPRIN2Q6IMN6 1127 aaKnown RBP10.62□□□□□ -0.71
SHPRH-206ENST00000438092 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.62□□□□□ -0.71
SHPRH-206ENST00000438092 COL26A1Q96A83 441 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 VPS33BQ9H267 617 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 C10orf88Q9H8K7 445 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 IL1RAPL1Q9NZN1 696 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 ATP6V1HQ9UI12 483 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 MAP2P11137 1827 aaKnown RBP10.62□□□□□ -0.71
SHPRH-206ENST00000438092 ITSN1Q15811 1721 aa10.62□□□□□ -0.71
SHPRH-206ENST00000438092 PSTPIP1O43586 416 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 FAM86B2P0C5J1 330 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 FLT3P36888 993 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 CASP10Q92851 521 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 COPS5Q92905 334 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 NSL1Q96IY1 281 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 CORO1BQ9BR76 489 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 SEMA6BQ9H3T3 888 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.61□□□□□ -0.71
SHPRH-206ENST00000438092 SOHLH2Q9NX45 425 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 TMCC3Q9ULS5 477 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 NCKAP1Q9Y2A7 1128 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 VPS9D1Q9Y2B5 631 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 IGF2BP3O00425 579 aaKnown RBP eCLIP10.61□□□□□ -0.71
SHPRH-206ENST00000438092 PSEN2P49810 448 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 TGFB2P61812 414 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 PTPN11Q06124 597 aaPredicted RBP10.61□□□□□ -0.71
SHPRH-206ENST00000438092 BST2Q10589 180 aaKnown RBP10.61□□□□□ -0.71
SHPRH-206ENST00000438092 METTL7BQ6UX53 244 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 DNAJC14Q6Y2X3 702 aaPredicted RBP10.61□□□□□ -0.71
SHPRH-206ENST00000438092 TRAPPC5Q8IUR0 188 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 TDRD5Q8NAT2 981 aaKnown RBP10.61□□□□□ -0.71
SHPRH-206ENST00000438092 OLFM3Q96PB7 478 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 PPP1R10Q96QC0 940 aaKnown RBP10.61□□□□□ -0.71
SHPRH-206ENST00000438092 HAO1Q9UJM8 370 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 DNAJC16Q9Y2G8 782 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 MYPNQ86TC9 1320 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 RAMP2O60895 175 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 SREBF1P36956 1147 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 HSD17B3P37058 310 aa10.61□□□□□ -0.71
SHPRH-206ENST00000438092 ALDH5A1P51649 535 aaPredicted RBP10.61□□□□□ -0.71
SHPRH-206ENST00000438092 COPAP53621 1224 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms