RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 SRPK3Q9UPE1 567 aa13.06□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 DNM3Q9UQ16 869 aa13.06□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 C2CD2Q9Y426 696 aa13.06□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 TLN1Q9Y490 2541 aaKnown RBP13.06□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 NPHP3-ACAD11A0A0J9YXS1 232 aa13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 PP2D1A8MPX8 630 aa13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 TISP43B9A030 160 aa13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 LAD1O00515 517 aa13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 SUV39H1O43463 412 aa13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 HUS1O60921 280 aa13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 ITGAVP06756 1048 aa13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 CR2P20023 1033 aa13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 GUCY2CP25092 1073 aa13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 LMO2P25791 158 aa13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 POLR2BP30876 1174 aaKnown RBP13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 SOX11P35716 441 aa13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 WNT7BP56706 349 aa13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 ADAT2Q7Z6V5 191 aaKnown RBP13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 CACTIN-AS1Q8N1I8 211 aa13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 SNX29Q8TEQ0 813 aa13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 RFFLQ8WZ73 363 aa13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 BHMTQ93088 406 aa13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 UCN2Q96RP3 112 aa13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 ELF4Q99607 663 aaPredicted RBP13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 BBS2Q9BXC9 721 aa13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 TMEM30AQ9NV96 361 aa13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 AGAP1Q9UPQ3 857 aa13.05□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 ANKRD63C9JTQ0 380 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 F8VP50 259 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 GABRDO14764 452 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 FSBPO95073 299 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 MT-CO3P00414 261 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 PIGRP01833 764 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 AFPP02771 609 aaKnown RBP13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 ACADMP11310 421 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 ABCB4P21439 1286 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 PPP3CCP48454 512 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 DGKGP49619 791 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 CACNA2D1P54289 1103 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 NCKAP1LP55160 1127 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 GABREP78334 506 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 ORC1Q13415 861 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 LINC00303Q3SY05 128 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 VSTM1Q6UX27 236 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 C4orf50Q6ZRC1 276 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 ADGRF2Q8IZF7 708 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 TMEM86AQ8N2M4 240 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 VCPIP1Q96JH7 1222 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 ZNF560Q96MR9 790 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 XPO6Q96QU8 1125 aaKnown RBP13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 PCED1AQ9H1Q7 454 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 CCSER2Q9H7U1 834 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 PLK2Q9NYY3 685 aa13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 CHORDC1Q9UHD1 332 aaPredicted RBP13.04□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 DFNA5O60443 496 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 GREM1O60565 184 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 TSPAN3O60637 253 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 WNT1P04628 370 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 ITGB3P05106 788 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 ITGB6P18564 788 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 PLCG1P19174 1290 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 PRKCHP24723 683 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 CD27P26842 260 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 ANXA13P27216 316 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 CCR10P46092 362 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 C21orf59P57076 290 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 NOP14P78316 857 aaKnown RBP13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 CYP27A1Q02318 531 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 BNIP3Q12983 259 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 ENPP2Q13822 863 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 SOWAHAQ2M3V2 549 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 TDRD10Q5VZ19 366 aaKnown RBP13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 SLC6A18Q96N87 628 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 SYT15Q9BQS2 421 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 DPH1Q9BZG8 443 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 IKZF4Q9H2S9 585 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 ASCL3Q9NQ33 180 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 STARD5Q9NSY2 213 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 THAP10Q9P2Z0 257 aaPredicted RBP13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 SNX9Q9Y5X1 595 aa13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 TP53BP1Q12888 1972 aaPredicted RBP13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 ARID1BQ8NFD5 2236 aaPredicted RBP13.03□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 MYH11P35749 1972 aa13.02□□□□□ -0.32
SMAD9-IT1-201ENST00000437983 ENO4A6NNW6 628 aa13.02□□□□□ -0.33
SMAD9-IT1-201ENST00000437983 VILLO15195 856 aa13.02□□□□□ -0.33
SMAD9-IT1-201ENST00000437983 SYNCRIPO60506 623 aaKnown RBP13.02□□□□□ -0.33
SMAD9-IT1-201ENST00000437983 PDGFRBP09619 1106 aa13.02□□□□□ -0.33
SMAD9-IT1-201ENST00000437983 CKMT2P17540 419 aa13.02□□□□□ -0.33
SMAD9-IT1-201ENST00000437983 ACO1P21399 889 aaKnown RBP13.02□□□□□ -0.33
SMAD9-IT1-201ENST00000437983 PCSK1P29120 753 aa13.02□□□□□ -0.33
SMAD9-IT1-201ENST00000437983 PNPLA4P41247 253 aa13.02□□□□□ -0.33
SMAD9-IT1-201ENST00000437983 LHX1P48742 406 aa13.02□□□□□ -0.33
SMAD9-IT1-201ENST00000437983 PDE4CQ08493 712 aa13.02□□□□□ -0.33
SMAD9-IT1-201ENST00000437983 ILKQ13418 452 aa13.02□□□□□ -0.33
SMAD9-IT1-201ENST00000437983 GEN1Q17RS7 908 aa13.02□□□□□ -0.33
SMAD9-IT1-201ENST00000437983 BMP2KLQ5H9B9 411 aa13.02□□□□□ -0.33
SMAD9-IT1-201ENST00000437983 LYPD8Q6UX82 237 aa13.02□□□□□ -0.33
SMAD9-IT1-201ENST00000437983 CRELD2Q6UXH1 353 aaPredicted RBP13.02□□□□□ -0.33
SMAD9-IT1-201ENST00000437983 C4orf32Q8N8J7 132 aa13.02□□□□□ -0.33
SMAD9-IT1-201ENST00000437983 C1orf127Q8N9H9 656 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms