RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 FRMD8Q9BZ67 464 aaPredicted RBP26.67■■□□□ 1.86
CPNE1-216ENST00000437340 TRPV6Q9H1D0 765 aa26.67■■□□□ 1.86
CPNE1-216ENST00000437340 PPANQ9NQ55 473 aaKnown RBP26.67■■□□□ 1.86
CPNE1-216ENST00000437340 RRN3Q9NYV6 651 aa26.67■■□□□ 1.86
CPNE1-216ENST00000437340 ZMYND8Q9ULU4 1186 aaPredicted RBP26.67■■□□□ 1.86
CPNE1-216ENST00000437340 ACTL7BQ9Y614 415 aa26.67■■□□□ 1.86
CPNE1-216ENST00000437340 DYNC1LI1Q9Y6G9 523 aaKnown RBP26.67■■□□□ 1.86
CPNE1-216ENST00000437340 GOLGA8MH3BSY2 632 aa26.66■■□□□ 1.86
CPNE1-216ENST00000437340 TMEM63AO94886 807 aa26.66■■□□□ 1.86
CPNE1-216ENST00000437340 EOMESO95936 686 aa26.66■■□□□ 1.86
CPNE1-216ENST00000437340 RASA2Q15283 850 aa26.66■■□□□ 1.86
CPNE1-216ENST00000437340 INTS6LQ5JSJ4 861 aaKnown RBP26.66■■□□□ 1.86
CPNE1-216ENST00000437340 TRAF7Q6Q0C0 670 aa26.66■■□□□ 1.86
CPNE1-216ENST00000437340 BZW1Q7L1Q6 419 aaKnown RBP26.66■■□□□ 1.86
CPNE1-216ENST00000437340 MDM1Q8TC05 714 aa26.66■■□□□ 1.86
CPNE1-216ENST00000437340 XPO6Q96QU8 1125 aaKnown RBP26.66■■□□□ 1.86
CPNE1-216ENST00000437340 CCT8L2Q96SF2 557 aa26.66■■□□□ 1.86
CPNE1-216ENST00000437340 INPP5FQ9Y2H2 1132 aa26.66■■□□□ 1.86
CPNE1-216ENST00000437340 EXOC1LA0A1B0GW35 172 aa26.66■■□□□ 1.86
CPNE1-216ENST00000437340 HHLA1C9JL84 531 aa26.66■■□□□ 1.86
CPNE1-216ENST00000437340 ARVCFO00192 962 aa26.66■■□□□ 1.86
CPNE1-216ENST00000437340 RBL1P28749 1068 aa26.66■■□□□ 1.86
CPNE1-216ENST00000437340 KCNJ11Q14654 390 aa26.66■■□□□ 1.86
CPNE1-216ENST00000437340 MAPRE1Q15691 268 aaKnown RBP26.66■■□□□ 1.86
CPNE1-216ENST00000437340 FNBP1LQ5T0N5 605 aa26.66■■□□□ 1.86
CPNE1-216ENST00000437340 FBXO46Q6PJ61 603 aaPredicted RBP26.66■■□□□ 1.86
CPNE1-216ENST00000437340 ATP11CQ8NB49 1132 aa26.66■■□□□ 1.86
CPNE1-216ENST00000437340 PYROXD1Q8WU10 500 aa26.66■■□□□ 1.86
CPNE1-216ENST00000437340 RSPH1Q8WYR4 309 aa26.66■■□□□ 1.86
CPNE1-216ENST00000437340 MYLPFQ96A32 169 aa26.66■■□□□ 1.86
CPNE1-216ENST00000437340 FETUBQ9UGM5 382 aa26.66■■□□□ 1.86
CPNE1-216ENST00000437340 RSPH14Q9UHP6 348 aa26.66■■□□□ 1.86
CPNE1-216ENST00000437340 NAALADL1Q9UQQ1 740 aa26.66■■□□□ 1.86
CPNE1-216ENST00000437340 M0QYT0 321 aa26.65■■□□□ 1.86
CPNE1-216ENST00000437340 NRP1O14786 923 aa26.65■■□□□ 1.86
CPNE1-216ENST00000437340 TYMPP19971 482 aa26.65■■□□□ 1.86
CPNE1-216ENST00000437340 PHBP35232 272 aa26.65■■□□□ 1.86
CPNE1-216ENST00000437340 BRCC3P46736 316 aa26.65■■□□□ 1.86
CPNE1-216ENST00000437340 CCT5P48643 541 aa26.65■■□□□ 1.86
CPNE1-216ENST00000437340 SEC24CP53992 1094 aa26.65■■□□□ 1.86
CPNE1-216ENST00000437340 DEUP1Q05D60 604 aa26.65■■□□□ 1.86
CPNE1-216ENST00000437340 NR1H3Q13133 447 aa26.65■■□□□ 1.86
CPNE1-216ENST00000437340 SLC45A4Q5BKX6 768 aa26.65■■□□□ 1.86
CPNE1-216ENST00000437340 SYPL2Q5VXT5 272 aa26.65■■□□□ 1.86
CPNE1-216ENST00000437340 PGAP3Q96FM1 320 aaPredicted RBP26.65■■□□□ 1.86
CPNE1-216ENST00000437340 ZNF333Q96JL9 665 aa26.65■■□□□ 1.86
CPNE1-216ENST00000437340 SUSD3Q96L08 255 aa26.65■■□□□ 1.86
CPNE1-216ENST00000437340 KCNK16Q96T55 309 aa26.65■■□□□ 1.86
CPNE1-216ENST00000437340 VPS37BQ9H9H4 285 aa26.65■■□□□ 1.86
CPNE1-216ENST00000437340 CTNNAL1Q9UBT7 734 aa26.65■■□□□ 1.86
CPNE1-216ENST00000437340 TCRBV7S3A2A0A539 114 aa26.64■■□□□ 1.86
CPNE1-216ENST00000437340 EBAG9O00559 213 aa26.64■■□□□ 1.86
CPNE1-216ENST00000437340 CAPN9O14815 690 aa26.64■■□□□ 1.86
CPNE1-216ENST00000437340 MAGEA6P43360 314 aa26.64■■□□□ 1.86
CPNE1-216ENST00000437340 NCBP2-AS2Q69YL0 99 aa26.64■■□□□ 1.86
CPNE1-216ENST00000437340 HFE2Q6ZVN8 426 aa26.64■■□□□ 1.86
CPNE1-216ENST00000437340 SLC24A5Q71RS6 500 aa26.64■■□□□ 1.86
CPNE1-216ENST00000437340 TADA2BQ86TJ2 420 aa26.64■■□□□ 1.86
CPNE1-216ENST00000437340 CCDC13Q8IYE1 715 aa26.64■■□□□ 1.86
CPNE1-216ENST00000437340 THEM5Q8N1Q8 247 aa26.64■■□□□ 1.86
CPNE1-216ENST00000437340 SCML4Q8N228 414 aa26.64■■□□□ 1.86
CPNE1-216ENST00000437340 ZNF473Q8WTR7 871 aaKnown RBP26.64■■□□□ 1.86
CPNE1-216ENST00000437340 ATXN2LQ8WWM7 1075 aaKnown RBP26.64■■□□□ 1.86
CPNE1-216ENST00000437340 IRGQQ8WZA9 623 aa26.64■■□□□ 1.86
CPNE1-216ENST00000437340 NTAN1Q96AB6 310 aa26.64■■□□□ 1.86
CPNE1-216ENST00000437340 PKMYT1Q99640 499 aa26.64■■□□□ 1.86
CPNE1-216ENST00000437340 INTS9Q9NV88 658 aaKnown RBP26.64■■□□□ 1.86
CPNE1-216ENST00000437340 TMEM30AQ9NV96 361 aa26.64■■□□□ 1.86
CPNE1-216ENST00000437340 SF3B1O75533 1304 aaKnown RBP eCLIP26.64■■□□□ 1.862e-6■■■■■ 85.9
CPNE1-216ENST00000437340 TDRD15B5MCY1 1934 aaKnown RBP26.64■■□□□ 1.85
CPNE1-216ENST00000437340 YJEFN3A6XGL0 299 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 E7ENQ6 273 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 H3BRJ5 948 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 FYNP06241 537 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 GOT1P17174 413 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 CACNA2D1P54289 1103 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 GBE1Q04446 702 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 CCDC38Q502W7 563 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 GLB1LQ6UWU2 654 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 GPRIN1Q7Z2K8 1008 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 QKIQ96PU8 341 aaKnown RBP eCLIP26.63■■□□□ 1.856e-7■■■□□ 15.2
CPNE1-216ENST00000437340 KLC2Q9H0B6 622 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 RABEP2Q9H5N1 569 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 CCDC134Q9H6E4 229 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 PNPLA8Q9NP80 782 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 SLC24A2Q9UI40 661 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 TSC2P49815 1807 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 HACD1B0YJ81 288 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 I3L4J1 428 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 GCATO75600 419 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 HSPA1AP0DMV8 641 aaKnown RBP26.63■■□□□ 1.85
CPNE1-216ENST00000437340 HSPA1BP0DMV9 641 aaKnown RBP26.63■■□□□ 1.85
CPNE1-216ENST00000437340 NRLP54845 237 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 PITX1P78337 314 aaPredicted RBP26.63■■□□□ 1.85
CPNE1-216ENST00000437340 GAD2Q05329 585 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 SLC10A2Q12908 348 aaPredicted RBP26.63■■□□□ 1.85
CPNE1-216ENST00000437340 MSS51Q4VC12 460 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 MAGEB5Q9BZ81 275 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 RAB6BQ9NRW1 208 aa26.63■■□□□ 1.85
CPNE1-216ENST00000437340 LTFP02788 710 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms