RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 HPS4Q9NQG7 708 aa16.2■□□□□ 0.18
TREX1-201ENST00000433541 ADAM22Q9P0K1 906 aa16.2■□□□□ 0.18
TREX1-201ENST00000433541 HBS1LQ9Y450 684 aaKnown RBP16.2■□□□□ 0.18
TREX1-201ENST00000433541 COL4A3Q01955 1670 aa16.2■□□□□ 0.18
TREX1-201ENST00000433541 SPECC1L-ADORA2AF8WAN1 911 aa16.19■□□□□ 0.18
TREX1-201ENST00000433541 MAN2B1O00754 1011 aa16.19■□□□□ 0.18
TREX1-201ENST00000433541 ADH1CP00326 375 aa16.19■□□□□ 0.18
TREX1-201ENST00000433541 CALB1P05937 261 aa16.19■□□□□ 0.18
TREX1-201ENST00000433541 GLI1P08151 1106 aa16.19■□□□□ 0.18
TREX1-201ENST00000433541 TBX4P57082 545 aa16.19■□□□□ 0.18
TREX1-201ENST00000433541 IER5LQ5T953 404 aa16.19■□□□□ 0.18
TREX1-201ENST00000433541 E4F1Q66K89 784 aaPredicted RBP16.19■□□□□ 0.18
TREX1-201ENST00000433541 MSANTD2Q6P1R3 559 aa16.19■□□□□ 0.18
TREX1-201ENST00000433541 XYLT1Q86Y38 959 aa16.19■□□□□ 0.18
TREX1-201ENST00000433541 DRC7Q8IY82 874 aa16.19■□□□□ 0.18
TREX1-201ENST00000433541 DEFB106AQ8N104 65 aa16.19■□□□□ 0.18
TREX1-201ENST00000433541 DQX1Q8TE96 717 aaKnown RBP16.19■□□□□ 0.18
TREX1-201ENST00000433541 WBP2Q969T9 261 aa16.19■□□□□ 0.18
TREX1-201ENST00000433541 EXOC4Q96A65 974 aa16.19■□□□□ 0.18
TREX1-201ENST00000433541 OTUB2Q96DC9 234 aa16.19■□□□□ 0.18
TREX1-201ENST00000433541 PCDHB18PQ96TA0 734 aa16.19■□□□□ 0.18
TREX1-201ENST00000433541 ECT2Q9H8V3 914 aa16.19■□□□□ 0.18
TREX1-201ENST00000433541 METTL5Q9NRN9 209 aaKnown RBP16.19■□□□□ 0.18
TREX1-201ENST00000433541 ASNSD1Q9NWL6 643 aa16.19■□□□□ 0.18
TREX1-201ENST00000433541 ZNF510Q9Y2H8 683 aa16.19■□□□□ 0.18
TREX1-201ENST00000433541 BZW2Q9Y6E2 419 aaKnown RBP16.19■□□□□ 0.18
TREX1-201ENST00000433541 ANKRD62A6NC57 917 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 PRR33A8MZF0 331 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 ARNTLO00327 626 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 GPR37L1O60883 481 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 DAB1O75553 588 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 MOCS2O96007 188 aaPredicted RBP16.18■□□□□ 0.18
TREX1-201ENST00000433541 SERPING1P05155 500 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 GLULP15104 373 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 MMP8P22894 467 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 GBP1P32455 592 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 CTHP32929 405 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 GABRB2P47870 512 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 CENPCQ03188 943 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 NME3Q13232 169 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 TRIP4Q15650 581 aaPredicted RBP16.18■□□□□ 0.18
TREX1-201ENST00000433541 SYPL2Q5VXT5 272 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 PPP1R2P3Q6NXS1 205 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 C1orf228Q6PIY5 440 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 TPGS1Q6ZTW0 290 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 HTR3DQ70Z44 454 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 SLC26A9Q7LBE3 791 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 ZNF571Q7Z3V5 609 aaPredicted RBP16.18■□□□□ 0.18
TREX1-201ENST00000433541 TAC4Q86UU9 113 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 RALGPS2Q86X27 583 aaPredicted RBP16.18■□□□□ 0.18
TREX1-201ENST00000433541 FBXL6Q8N531 539 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 SYN2Q92777 582 aaPredicted RBP16.18■□□□□ 0.18
TREX1-201ENST00000433541 BHMTQ93088 406 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 MSANTD3Q96H12 275 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 SELENOOQ9BVL4 669 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 FOXQ1Q9C009 403 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 DEF6Q9H4E7 631 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 DDIT4Q9NX09 232 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.18■□□□□ 0.18
TREX1-201ENST00000433541 WDR35Q9P2L0 1181 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 STAP1Q9ULZ2 295 aa16.18■□□□□ 0.18
TREX1-201ENST00000433541 ATG2BQ96BY7 2078 aa16.17■□□□□ 0.18
TREX1-201ENST00000433541 F5P12259 2224 aa16.17■□□□□ 0.18
TREX1-201ENST00000433541 KANSL1LA0AUZ9 987 aa16.17■□□□□ 0.18
TREX1-201ENST00000433541 TRUB2O95900 331 aaKnown RBP16.17■□□□□ 0.18
TREX1-201ENST00000433541 APOEP02649 317 aa16.17■□□□□ 0.18
TREX1-201ENST00000433541 CYP17A1P05093 508 aa16.17■□□□□ 0.18
TREX1-201ENST00000433541 ADH5P11766 374 aa16.17■□□□□ 0.18
TREX1-201ENST00000433541 UNGP13051 313 aaPredicted RBP16.17■□□□□ 0.18
TREX1-201ENST00000433541 PRKCIP41743 596 aa16.17■□□□□ 0.18
TREX1-201ENST00000433541 SLC11A2P49281 568 aa16.17■□□□□ 0.18
TREX1-201ENST00000433541 SULT1E1P49888 294 aa16.17■□□□□ 0.18
TREX1-201ENST00000433541 ZNF75DP51815 510 aa16.17■□□□□ 0.18
TREX1-201ENST00000433541 VCPP55072 806 aaKnown RBP16.17■□□□□ 0.18
TREX1-201ENST00000433541 PON2Q15165 354 aa16.17■□□□□ 0.18
TREX1-201ENST00000433541 DHCR24Q15392 516 aa16.17■□□□□ 0.18
TREX1-201ENST00000433541 LY6G5CQ5SRR4 150 aa16.17■□□□□ 0.18
TREX1-201ENST00000433541 NUGGCQ68CJ6 796 aa16.17■□□□□ 0.18
TREX1-201ENST00000433541 ACAD10Q6JQN1 1059 aa16.17■□□□□ 0.18
TREX1-201ENST00000433541 SND1Q7KZF4 910 aaKnown RBP eCLIP16.17■□□□□ 0.18
TREX1-201ENST00000433541 UNC45BQ8IWX7 931 aa16.17■□□□□ 0.18
TREX1-201ENST00000433541 KIAA1958Q8N8K9 716 aa16.17■□□□□ 0.18
TREX1-201ENST00000433541 SIT1Q9Y3P8 196 aa16.17■□□□□ 0.18
TREX1-201ENST00000433541 FAM170BA6NMN3 283 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 AKR1B15C9JRZ8 316 aaPredicted RBP16.16■□□□□ 0.18
TREX1-201ENST00000433541 NEDD8-MDP1E9PL57 170 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 M0QYT0 321 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 NCAM2O15394 837 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 AP5Z1O43299 807 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 CYBBP04839 570 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 FYNP06241 537 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 DESP17661 470 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 GJA4P35212 333 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 NOS2P35228 1153 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 CHKAP35790 457 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 MATKP42679 507 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 ADKP55263 362 aaKnown RBP16.16■□□□□ 0.18
TREX1-201ENST00000433541 STARD6P59095 220 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 GAD2Q05329 585 aa16.16■□□□□ 0.18
TREX1-201ENST00000433541 ASTLQ6HA08 431 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms