RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 CEP192Q8TEP8 1941 aa16.68■□□□□ 0.26
NUP50-209ENST00000432340 MYO9AB2RTY4 2548 aa16.67■□□□□ 0.26
NUP50-209ENST00000432340 K7ENP7 123 aa16.67■□□□□ 0.26
NUP50-209ENST00000432340 LDHAP00338 332 aaKnown RBP16.67■□□□□ 0.26
NUP50-209ENST00000432340 MT-CO3P00414 261 aa16.67■□□□□ 0.26
NUP50-209ENST00000432340 AFPP02771 609 aaKnown RBP16.67■□□□□ 0.26
NUP50-209ENST00000432340 KRT18P05783 430 aaKnown RBP16.67■□□□□ 0.26
NUP50-209ENST00000432340 EPHX1P07099 455 aa16.67■□□□□ 0.26
NUP50-209ENST00000432340 TMEM191BP0C7N4 346 aa16.67■□□□□ 0.26
NUP50-209ENST00000432340 WARSP23381 471 aaKnown RBP16.67■□□□□ 0.26
NUP50-209ENST00000432340 LSSP48449 732 aa16.67■□□□□ 0.26
NUP50-209ENST00000432340 HS1BP3Q53T59 392 aa16.67■□□□□ 0.26
NUP50-209ENST00000432340 INO80CQ6PI98 192 aaPredicted RBP16.67■□□□□ 0.26
NUP50-209ENST00000432340 ANKS1BQ7Z6G8 1248 aa16.67■□□□□ 0.26
NUP50-209ENST00000432340 C4orf32Q8N8J7 132 aa16.67■□□□□ 0.26
NUP50-209ENST00000432340 SNX25Q9H3E2 840 aa16.67■□□□□ 0.26
NUP50-209ENST00000432340 TPX2Q9ULW0 747 aaKnown RBP16.67■□□□□ 0.26
NUP50-209ENST00000432340 ANK1P16157 1881 aa16.67■□□□□ 0.26
NUP50-209ENST00000432340 PP2D1A8MPX8 630 aa16.66■□□□□ 0.26
NUP50-209ENST00000432340 PDGFRBP09619 1106 aa16.66■□□□□ 0.26
NUP50-209ENST00000432340 FAM163BP0C2L3 166 aa16.66■□□□□ 0.26
NUP50-209ENST00000432340 LMO2P25791 158 aa16.66■□□□□ 0.26
NUP50-209ENST00000432340 ACSL1P33121 698 aa16.66■□□□□ 0.26
NUP50-209ENST00000432340 ZNF131P52739 623 aa16.66■□□□□ 0.26
NUP50-209ENST00000432340 COPAP53621 1224 aa16.66■□□□□ 0.26
NUP50-209ENST00000432340 GABREP78334 506 aa16.66■□□□□ 0.26
NUP50-209ENST00000432340 INSM1Q01101 510 aaPredicted RBP16.66■□□□□ 0.26
NUP50-209ENST00000432340 MDH1BQ5I0G3 518 aa16.66■□□□□ 0.26
NUP50-209ENST00000432340 KDM7AQ6ZMT4 941 aa16.66■□□□□ 0.26
NUP50-209ENST00000432340 CACUL1Q86Y37 369 aa16.66■□□□□ 0.26
NUP50-209ENST00000432340 BRSK2Q8IWQ3 736 aa16.66■□□□□ 0.26
NUP50-209ENST00000432340 NSUN7Q8NE18 718 aaKnown RBP16.66■□□□□ 0.26
NUP50-209ENST00000432340 GOLGA1Q92805 767 aa16.66■□□□□ 0.26
NUP50-209ENST00000432340 GTF3C6Q969F1 213 aa16.66■□□□□ 0.26
NUP50-209ENST00000432340 DEPDC7Q96QD5 511 aa16.66■□□□□ 0.26
NUP50-209ENST00000432340 REEP2Q9BRK0 252 aa16.66■□□□□ 0.26
NUP50-209ENST00000432340 ZHX3Q9H4I2 956 aa16.66■□□□□ 0.26
NUP50-209ENST00000432340 POLR1BQ9H9Y6 1135 aa16.66■□□□□ 0.26
NUP50-209ENST00000432340 CHORDC1Q9UHD1 332 aaPredicted RBP16.66■□□□□ 0.26
NUP50-209ENST00000432340 FBXO10Q9UK96 956 aa16.66■□□□□ 0.26
NUP50-209ENST00000432340 EXOC7Q9UPT5 735 aa16.66■□□□□ 0.26
NUP50-209ENST00000432340 ZNF510Q9Y2H8 683 aa16.66■□□□□ 0.26
NUP50-209ENST00000432340 MYO18AQ92614 2054 aaKnown RBP16.66■□□□□ 0.26
NUP50-209ENST00000432340 KNL1Q8NG31 2342 aa16.65■□□□□ 0.26
NUP50-209ENST00000432340 ANKRD63C9JTQ0 380 aa16.65■□□□□ 0.26
NUP50-209ENST00000432340 CBX4O00257 560 aa16.65■□□□□ 0.26
NUP50-209ENST00000432340 HCRTO43612 131 aa16.65■□□□□ 0.26
NUP50-209ENST00000432340 TLR5O60602 858 aa16.65■□□□□ 0.26
NUP50-209ENST00000432340 DNTTP04053 509 aa16.65■□□□□ 0.26
NUP50-209ENST00000432340 ACP1P24666 158 aa16.65■□□□□ 0.26
NUP50-209ENST00000432340 EPHA8P29322 1005 aaPredicted RBP16.65■□□□□ 0.26
NUP50-209ENST00000432340 GNL1P36915 607 aaPredicted RBP16.65■□□□□ 0.26
NUP50-209ENST00000432340 UBAP2LQ14157 1087 aaKnown RBP16.65■□□□□ 0.26
NUP50-209ENST00000432340 ZNF234Q14588 700 aa16.65■□□□□ 0.26
NUP50-209ENST00000432340 LAYNQ6UX15 382 aa16.65■□□□□ 0.26
NUP50-209ENST00000432340 CCDC81Q6ZN84 652 aa16.65■□□□□ 0.26
NUP50-209ENST00000432340 HVCN1Q96D96 273 aa16.65■□□□□ 0.26
NUP50-209ENST00000432340 HPDLQ96IR7 371 aa16.65■□□□□ 0.26
NUP50-209ENST00000432340 ANKRD36BP1Q96IX9 119 aa16.65■□□□□ 0.26
NUP50-209ENST00000432340 C8orf76Q96K31 380 aa16.65■□□□□ 0.26
NUP50-209ENST00000432340 CCSER2Q9H7U1 834 aa16.65■□□□□ 0.26
NUP50-209ENST00000432340 ELOVL2Q9NXB9 296 aa16.65■□□□□ 0.26
NUP50-209ENST00000432340 RBAKQ9NYW8 714 aaPredicted RBP16.65■□□□□ 0.26
NUP50-209ENST00000432340 NCKAP1Q9Y2A7 1128 aa16.65■□□□□ 0.26
NUP50-209ENST00000432340 SLCO1B1Q9Y6L6 691 aa16.65■□□□□ 0.26
NUP50-209ENST00000432340 COL5A1P20908 1838 aaPredicted RBP16.65■□□□□ 0.26
NUP50-209ENST00000432340 NOTCH2Q04721 2471 aa16.64■□□□□ 0.26
NUP50-209ENST00000432340 A0A1W2PPC4 97 aa16.64■□□□□ 0.25
NUP50-209ENST00000432340 SLC26A4O43511 780 aa16.64■□□□□ 0.25
NUP50-209ENST00000432340 RBMS1P29558 406 aaKnown RBP16.64■□□□□ 0.25
NUP50-209ENST00000432340 CHKAP35790 457 aa16.64■□□□□ 0.25
NUP50-209ENST00000432340 ATP5C1P36542 298 aaKnown RBP16.64■□□□□ 0.25
NUP50-209ENST00000432340 MFAP3P55082 362 aa16.64■□□□□ 0.25
NUP50-209ENST00000432340 KCNT1Q5JUK3 1230 aa16.64■□□□□ 0.25
NUP50-209ENST00000432340 CRELD2Q6UXH1 353 aaPredicted RBP16.64■□□□□ 0.25
NUP50-209ENST00000432340 LIMS2Q7Z4I7 341 aa16.64■□□□□ 0.25
NUP50-209ENST00000432340 KBTBD7Q8WVZ9 684 aa16.64■□□□□ 0.25
NUP50-209ENST00000432340 GRAMD1AQ96CP6 724 aa16.64■□□□□ 0.25
NUP50-209ENST00000432340 ARHGAP9Q9BRR9 750 aa16.64■□□□□ 0.25
NUP50-209ENST00000432340 FAM213AQ9BRX8 229 aa16.64■□□□□ 0.25
NUP50-209ENST00000432340 MMTAG2Q9BU76 263 aaKnown RBP16.64■□□□□ 0.25
NUP50-209ENST00000432340 ST6GALNAC4Q9H4F1 302 aa16.64■□□□□ 0.25
NUP50-209ENST00000432340 FBXO44Q9H4M3 255 aa16.64■□□□□ 0.25
NUP50-209ENST00000432340 ERVMER34-1Q9H9K5 563 aa16.64■□□□□ 0.25
NUP50-209ENST00000432340 TLR8Q9NR97 1041 aaKnown RBP16.64■□□□□ 0.25
NUP50-209ENST00000432340 NPHP3-ACAD11A0A0J9YXS1 232 aa16.63■□□□□ 0.25
NUP50-209ENST00000432340 DTNBO60941 627 aa16.63■□□□□ 0.25
NUP50-209ENST00000432340 TNNC2P02585 160 aa16.63■□□□□ 0.25
NUP50-209ENST00000432340 CYBBP04839 570 aa16.63■□□□□ 0.25
NUP50-209ENST00000432340 MPOP05164 745 aa16.63■□□□□ 0.25
NUP50-209ENST00000432340 ZDHHC11BP0C7U3 371 aa16.63■□□□□ 0.25
NUP50-209ENST00000432340 C7P10643 843 aa16.63■□□□□ 0.25
NUP50-209ENST00000432340 CAMK2GQ13555 558 aaPredicted RBP16.63■□□□□ 0.25
NUP50-209ENST00000432340 C4orf17Q53FE4 359 aa16.63■□□□□ 0.25
NUP50-209ENST00000432340 KIAA0895LQ68EN5 471 aa16.63■□□□□ 0.25
NUP50-209ENST00000432340 TADA2BQ86TJ2 420 aa16.63■□□□□ 0.25
NUP50-209ENST00000432340 GPBP1Q86WP2 473 aa16.63■□□□□ 0.25
NUP50-209ENST00000432340 NECAB1Q8N987 351 aa16.63■□□□□ 0.25
NUP50-209ENST00000432340 CIPCQ9C0C6 399 aa16.63■□□□□ 0.25
NUP50-209ENST00000432340 AASDHPPTQ9NRN7 309 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms