RNA–Protein interactions for RNA: ENST00000431533.6

RPL28-204, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-204ENST00000431533 TSPAN16Q9UKR8 245 aa16.13■□□□□ 0.17
RPL28-204ENST00000431533 TBC1D3BA6NDS4 549 aa16.12■□□□□ 0.17
RPL28-204ENST00000431533 PATE3B3GLJ2 98 aa16.12■□□□□ 0.17
RPL28-204ENST00000431533 CDX4O14627 284 aaPredicted RBP16.12■□□□□ 0.17
RPL28-204ENST00000431533 GIPC1O14908 333 aa16.12■□□□□ 0.17
RPL28-204ENST00000431533 P4HA2O15460 535 aa16.12■□□□□ 0.17
RPL28-204ENST00000431533 CALCAP01258 141 aa16.12■□□□□ 0.17
RPL28-204ENST00000431533 RARGP13631 454 aa16.12■□□□□ 0.17
RPL28-204ENST00000431533 MTIF2P46199 727 aaKnown RBP16.12■□□□□ 0.17
RPL28-204ENST00000431533 SLC6A11P48066 632 aa16.12■□□□□ 0.17
RPL28-204ENST00000431533 TUBP50607 506 aa16.12■□□□□ 0.17
RPL28-204ENST00000431533 MARSP56192 900 aaKnown RBP16.12■□□□□ 0.17
RPL28-204ENST00000431533 GAB4Q2WGN9 574 aa16.12■□□□□ 0.17
RPL28-204ENST00000431533 SDE2Q6IQ49 451 aa16.12■□□□□ 0.17
RPL28-204ENST00000431533 SLC23A3Q6PIS1 610 aa16.12■□□□□ 0.17
RPL28-204ENST00000431533 UBR7Q8N806 425 aa16.12■□□□□ 0.17
RPL28-204ENST00000431533 MLKLQ8NB16 471 aa16.12■□□□□ 0.17
RPL28-204ENST00000431533 ANKRD52Q8NB46 1076 aa16.12■□□□□ 0.17
RPL28-204ENST00000431533 EHBP1Q8NDI1 1231 aa16.12■□□□□ 0.17
RPL28-204ENST00000431533 LMO3Q8TAP4 145 aa16.12■□□□□ 0.17
RPL28-204ENST00000431533 UBA3Q8TBC4 463 aa16.12■□□□□ 0.17
RPL28-204ENST00000431533 HMGB4Q8WW32 186 aa16.12■□□□□ 0.17
RPL28-204ENST00000431533 WBP2Q969T9 261 aa16.12■□□□□ 0.17
RPL28-204ENST00000431533 ZFRQ96KR1 1074 aaKnown RBP16.12■□□□□ 0.17
RPL28-204ENST00000431533 INTS2Q9H0H0 1204 aaKnown RBP16.12■□□□□ 0.17
RPL28-204ENST00000431533 FAM124BQ9H5Z6 455 aaPredicted RBP16.12■□□□□ 0.17
RPL28-204ENST00000431533 DEC1Q9P2X7 70 aa16.12■□□□□ 0.17
RPL28-204ENST00000431533 CEP295Q9C0D2 2601 aa16.11■□□□□ 0.17
RPL28-204ENST00000431533 MYOFQ9NZM1 2061 aa16.11■□□□□ 0.17
RPL28-204ENST00000431533 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.11■□□□□ 0.17
RPL28-204ENST00000431533 TCRBV21S2A2A0A5A6 115 aa16.11■□□□□ 0.17
RPL28-204ENST00000431533 SGK1O00141 431 aa16.11■□□□□ 0.17
RPL28-204ENST00000431533 TULP2O00295 520 aa16.11■□□□□ 0.17
RPL28-204ENST00000431533 PMM2O15305 246 aa16.11■□□□□ 0.17
RPL28-204ENST00000431533 VDRP11473 427 aa16.11■□□□□ 0.17
RPL28-204ENST00000431533 ATP5C1P36542 298 aaKnown RBP16.11■□□□□ 0.17
RPL28-204ENST00000431533 BCAT1P54687 386 aa16.11■□□□□ 0.17
RPL28-204ENST00000431533 GFPT1Q06210 699 aaPredicted RBP16.11■□□□□ 0.17
RPL28-204ENST00000431533 PDE4CQ08493 712 aa16.11■□□□□ 0.17
RPL28-204ENST00000431533 HNRNPDQ14103 355 aaKnown RBP16.11■□□□□ 0.17
RPL28-204ENST00000431533 DUOXA1Q1HG43 343 aa16.11■□□□□ 0.17
RPL28-204ENST00000431533 DPCR1Q3MIW9 517 aa16.11■□□□□ 0.17
RPL28-204ENST00000431533 HSP90AA4PQ58FG1 418 aa16.11■□□□□ 0.17
RPL28-204ENST00000431533 C10orf120Q5SQS8 335 aa16.11■□□□□ 0.17
RPL28-204ENST00000431533 TMEFF1Q8IYR6 380 aa16.11■□□□□ 0.17
RPL28-204ENST00000431533 RBBP8NLQ8NC74 664 aaPredicted RBP16.11■□□□□ 0.17
RPL28-204ENST00000431533 RLN3Q8WXF3 142 aa16.11■□□□□ 0.17
RPL28-204ENST00000431533 MED15Q96RN5 788 aa16.11■□□□□ 0.17
RPL28-204ENST00000431533 CRACR2AQ9BSW2 395 aa16.11■□□□□ 0.17
RPL28-204ENST00000431533 ZMIZ1Q9ULJ6 1067 aa16.11■□□□□ 0.17
RPL28-204ENST00000431533 SLC6A14Q9UN76 642 aa16.11■□□□□ 0.17
RPL28-204ENST00000431533 C1QTNF9BB2RNN3 333 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 H0Y626 953 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 RNF225M0QZC1 329 aaPredicted RBP16.1■□□□□ 0.17
RPL28-204ENST00000431533 ZNF217O75362 1048 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 TRIM16O95361 564 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 C1QTNF9P0C862 333 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 RALAP11233 206 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 KRT5P13647 590 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 BRD2P25440 801 aaKnown RBP16.1■□□□□ 0.17
RPL28-204ENST00000431533 KIR2DL1P43626 348 aaPredicted RBP16.1■□□□□ 0.17
RPL28-204ENST00000431533 MAPK8P45983 427 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 TKTL1P51854 596 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 KDSRQ06136 332 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 GOLGA8FQ08AF8 430 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 GOLGA8DPQ0D2H9 430 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 BST2Q10589 180 aaKnown RBP16.1■□□□□ 0.17
RPL28-204ENST00000431533 ANO4Q32M45 955 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 MAP7D1Q3KQU3 841 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 LY6G5CQ5SRR4 150 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 ARMCX6Q7L4S7 300 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 CCDC186Q7Z3E2 898 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 SCD5Q86SK9 330 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 BBS7Q8IWZ6 715 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 ZNF513Q8N8E2 541 aaPredicted RBP16.1■□□□□ 0.17
RPL28-204ENST00000431533 DEFB124Q8NES8 71 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 XPO6Q96QU8 1125 aaKnown RBP16.1■□□□□ 0.17
RPL28-204ENST00000431533 ULBP1Q9BZM6 244 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 LRRC4Q9HBW1 653 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 CYLDQ9NQC7 956 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.1■□□□□ 0.17
RPL28-204ENST00000431533 RASAL2Q9UJF2 1139 aa16.1■□□□□ 0.17
RPL28-204ENST00000431533 FAM208BQ5VWN6 2430 aa16.09■□□□□ 0.17
RPL28-204ENST00000431533 CHD6Q8TD26 2715 aa16.09■□□□□ 0.17
RPL28-204ENST00000431533 UPK3BL1B0FP48 263 aa16.09■□□□□ 0.17
RPL28-204ENST00000431533 UPK3BL2E5RIL1 263 aa16.09■□□□□ 0.17
RPL28-204ENST00000431533 M0QYV0 167 aa16.09■□□□□ 0.17
RPL28-204ENST00000431533 O00370 1275 aa16.09■□□□□ 0.17
RPL28-204ENST00000431533 PIK3R2O00459 728 aa16.09■□□□□ 0.17
RPL28-204ENST00000431533 XPO1O14980 1071 aaKnown RBP16.09■□□□□ 0.17
RPL28-204ENST00000431533 HOXC11O43248 304 aaPredicted RBP16.09■□□□□ 0.17
RPL28-204ENST00000431533 CFIP05156 583 aa16.09■□□□□ 0.17
RPL28-204ENST00000431533 HMBSP08397 361 aa16.09■□□□□ 0.17
RPL28-204ENST00000431533 ENGP17813 658 aa16.09■□□□□ 0.17
RPL28-204ENST00000431533 PSEN1P49768 467 aa16.09■□□□□ 0.17
RPL28-204ENST00000431533 RGS7P49802 495 aa16.09■□□□□ 0.17
RPL28-204ENST00000431533 RPL6Q02878 288 aaKnown RBP16.09■□□□□ 0.17
RPL28-204ENST00000431533 ADIGQ0VDE8 80 aa16.09■□□□□ 0.17
RPL28-204ENST00000431533 EFEMP1Q12805 493 aa16.09■□□□□ 0.17
RPL28-204ENST00000431533 CLEC17AQ6ZS10 378 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms