RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 MAST3O60307 1309 aa3.59□□□□□ -1.83
HMGB1P27-201ENST00000431429 MBD3L5A6NJ08 208 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 SAC3D1A6NKF1 404 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 A6NLC8 198 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 M0QYT0 321 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 CD4P01730 458 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 FESP07332 822 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 CYP3A4P08684 503 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 IGFBP2P18065 325 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 CAPN3P20807 821 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 TNFAIP3P21580 790 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 BDNFP23560 247 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 ADRA1DP25100 572 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 MTHFSP49914 203 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 GEMIN4P57678 1058 aaKnown RBP3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 RPL15P61313 204 aaKnown RBP3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 BLOC1S1P78537 153 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 SLC4A8Q2Y0W8 1093 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 TBRG1Q3YBR2 411 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 TIGD2Q4W5G0 525 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 MIIPQ5JXC2 388 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 ACSM6Q6P461 480 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 MTHFD1LQ6UB35 978 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 Q6ZWC4 215 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 TMEM57Q8N5G2 664 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 TSPYL6Q8N831 410 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 PNPLA1Q8N8W4 532 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 PCYOX1LQ8NBM8 494 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 GLMPQ8WWB7 406 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 C3orf49Q96BT1 292 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 R3HDM4Q96D70 268 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 TRMT61AQ96FX7 289 aaKnown RBP3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 MLST8Q9BVC4 326 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 ARHGAP39Q9C0H5 1083 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 SERHL2Q9H4I8 314 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 SAP30LQ9HAJ7 183 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 ALG13Q9NP73 1137 aaKnown RBP3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 SLC22A11Q9NSA0 550 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 SERTAD4Q9NUC0 356 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 LIN7CQ9NUP9 197 aaKnown RBP3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 TMLHEQ9NVH6 421 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 KCND3Q9UK17 655 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 ASAP1Q9ULH1 1129 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 RCE1Q9Y256 329 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 LMTK3Q96Q04 1460 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 COL4A3Q01955 1670 aa3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 FNDC1Q4ZHG4 1894 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P27-201ENST00000431429 CYP3A7-CYP3A51PA0A087WV96 503 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 CCDC187A0A096LP49 1063 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 VWA3AA6NCI4 1184 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 NACADO15069 1562 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 YY2O15391 372 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 NXPH3O95157 252 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 DRD1P21728 446 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 MMP8P22894 467 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 CYP3A7P24462 503 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 PTGS2P35354 604 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 EIF5P55010 431 aaKnown RBP3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 RBM6P78332 1123 aaKnown RBP3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 PSG6Q00889 435 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 TLE3Q04726 772 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 PLP2Q04941 152 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 EIF2B5Q13144 721 aaKnown RBP3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 SEMA3BQ13214 749 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 G3BP1Q13283 466 aaKnown RBP eCLIP3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 TRPC3Q13507 836 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 BMPR2Q13873 1038 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 CTXN3Q4LDR2 81 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 ANKRD45Q5TZF3 282 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 ANO7Q6IWH7 933 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 DPY19L3Q6ZPD9 716 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 PTCHD4Q6ZW05 846 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 SYT13Q7L8C5 426 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 WDR53Q7Z5U6 358 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 TTC30AQ86WT1 665 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 HEATR4Q86WZ0 1026 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 PALM2Q8IXS6 379 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 PTGR2Q8N8N7 351 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 CHST13Q8NET6 341 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 CEP70Q8NHQ1 597 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 HMGB4Q8WW32 186 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 HAS1Q92839 578 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 EDC3Q96F86 508 aaKnown RBP3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 PRR11Q96HE9 360 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 Q96MF0 132 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 COQ10AQ96MF6 247 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 LENG8Q96PV6 779 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 HERC2P3Q9BVR0 1158 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 FSD1LQ9BXM9 530 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 KRTAP4-8Q9BYQ9 185 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 PRDM13Q9H4Q3 707 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 JMJD4Q9H9V9 463 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 GOLGA2P5Q9HBQ8 144 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 NOD2Q9HC29 1040 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 TERF2IPQ9NYB0 399 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 DLL3Q9NYJ7 618 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 PCDHB7Q9Y5E2 793 aa3.57□□□□□ -1.84
HMGB1P27-201ENST00000431429 ITIH6Q6UXX5 1313 aa3.56□□□□□ -1.84
HMGB1P27-201ENST00000431429 CCDC196A0A1B0GTZ2 297 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms