RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 A0A1W2PQH9 124 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 PRRG1O14668 218 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 FSCN2O14926 492 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 CSH1P0DML2 217 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 CSH2P0DML3 217 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 IL9P15248 144 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 PITX1P78337 314 aaPredicted RBP18.98■□□□□ 0.63
HMGN1-206ENST00000431390 DEUP1Q05D60 604 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 SMTNL2Q2TAL5 461 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 LEXMQ3ZCV2 418 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 SCYL2Q6P3W7 929 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 CCDC50Q8IVM0 306 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 MRPL43Q8N983 215 aaKnown RBP18.98■□□□□ 0.63
HMGN1-206ENST00000431390 SLC7A14Q8TBB6 771 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 GIPC2Q8TF65 315 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 EDEM1Q92611 657 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 SLITRK1Q96PX8 696 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 NMUR1Q9HB89 426 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 TLR8Q9NR97 1041 aaKnown RBP18.98■□□□□ 0.63
HMGN1-206ENST00000431390 CLIC5Q9NZA1 410 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 CALCOCO1Q9P1Z2 691 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 MTCL1Q9Y4B5 1905 aaKnown RBP18.98■□□□□ 0.63
HMGN1-206ENST00000431390 C2orf71A6NGG8 1288 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 C1RP00736 705 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 DNAJB1P25685 340 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 PLD1Q13393 1074 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 PPP2R5EQ16537 467 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 KCNT1Q5JUK3 1230 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 PDE12Q6L8Q7 609 aaKnown RBP18.98■□□□□ 0.63
HMGN1-206ENST00000431390 LILRA6Q6PI73 481 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 RSRC2Q7L4I2 434 aaKnown RBP18.98■□□□□ 0.63
HMGN1-206ENST00000431390 PSTKQ8IV42 348 aaKnown RBP18.98■□□□□ 0.63
HMGN1-206ENST00000431390 MAIP1Q8WWC4 291 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 OVCA2Q8WZ82 227 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 GMIPQ9P107 970 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 INSL5Q9Y5Q6 135 aa18.98■□□□□ 0.63
HMGN1-206ENST00000431390 LRRD1A4D1F6 860 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 CCDC188H7C350 402 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 CTIFO43310 598 aaKnown RBP18.97■□□□□ 0.63
HMGN1-206ENST00000431390 TGM5O43548 720 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 IGLV3-25P01717 112 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 ZDHHC11BP0C7U3 371 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 KDELR1P24390 212 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 AIF1P55008 147 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 TAF10Q12962 218 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 MTMR3Q13615 1198 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 VEPH1Q14D04 833 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 ERMARDQ5T6L9 678 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 PLPP4Q5VZY2 271 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 MSANTD2Q6P1R3 559 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 SPOCD1Q6ZMY3 1216 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 VSIG1Q86XK7 387 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 GJD3Q8N144 294 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 PDZD8Q8NEN9 1154 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 DQX1Q8TE96 717 aaKnown RBP18.97■□□□□ 0.63
HMGN1-206ENST00000431390 RAPGEF5Q92565 580 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 HSPH1Q92598 858 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 RNF25Q96BH1 459 aaPredicted RBP18.97■□□□□ 0.63
HMGN1-206ENST00000431390 TRMT2BQ96GJ1 504 aaKnown RBP18.97■□□□□ 0.63
HMGN1-206ENST00000431390 MYRFLQ96LU7 910 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 SNRNP25Q9BV90 132 aaKnown RBP18.97■□□□□ 0.63
HMGN1-206ENST00000431390 OSBPL8Q9BZF1 889 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 SMOC2Q9H3U7 446 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 FAM204AQ9H8W3 233 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 KLHL11Q9NVR0 708 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 FBXW11Q9UKB1 542 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 EFR3BQ9Y2G0 817 aa18.97■□□□□ 0.63
HMGN1-206ENST00000431390 GOLGA6L10A0A0M3HER8 536 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 C3orf70A6NLC5 250 aaPredicted RBP18.96■□□□□ 0.63
HMGN1-206ENST00000431390 H3BNC9 293 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 KRIT1O00522 736 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 GRM6O15303 877 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 KLRC2P26717 231 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 GBP1P32455 592 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 CDKN2BP42772 138 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 ARSEP51690 589 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 ATXN1P54253 815 aaKnown RBP18.96■□□□□ 0.63
HMGN1-206ENST00000431390 C2orf54Q08AI8 447 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 TWF1Q12792 350 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 NME3Q13232 169 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 PDK2Q15119 407 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 TAZQ16635 292 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 TFDP3Q5H9I0 405 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 MFSD7Q6UXD7 560 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 CCDC149Q6ZUS6 474 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 TAC4Q86UU9 113 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 MMGT1Q8N4V1 131 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 KCTD6Q8NC69 237 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 RNF139Q8WU17 664 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 NTAN1Q96AB6 310 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 OLA1Q9NTK5 396 aaKnown RBP18.96■□□□□ 0.63
HMGN1-206ENST00000431390 RBM12Q9NTZ6 932 aaKnown RBP18.96■□□□□ 0.63
HMGN1-206ENST00000431390 PIGVQ9NUD9 493 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.96■□□□□ 0.63
HMGN1-206ENST00000431390 DDIT4Q9NX09 232 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 OSER1Q9NX31 292 aa18.96■□□□□ 0.63
HMGN1-206ENST00000431390 HIDE1A8MVS5 230 aa18.95■□□□□ 0.62
HMGN1-206ENST00000431390 RALAP11233 206 aa18.95■□□□□ 0.62
HMGN1-206ENST00000431390 HMGA1P17096 107 aaKnown RBP18.95■□□□□ 0.62
HMGN1-206ENST00000431390 PGFP49763 221 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms