RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 FYB2Q5VWT5 728 aa13.11□□□□□ -0.31
SMPD4-204ENST00000430682 BSPRYQ5W0U4 402 aa13.11□□□□□ -0.31
SMPD4-204ENST00000430682 ANO7Q6IWH7 933 aa13.11□□□□□ -0.31
SMPD4-204ENST00000430682 DPY19L2P1Q6NXN4 242 aa13.11□□□□□ -0.31
SMPD4-204ENST00000430682 DENND1BQ6P3S1 775 aa13.11□□□□□ -0.31
SMPD4-204ENST00000430682 CEP68Q76N32 757 aa13.11□□□□□ -0.31
SMPD4-204ENST00000430682 DENND1CQ8IV53 801 aa13.11□□□□□ -0.31
SMPD4-204ENST00000430682 TERB1Q8NA31 727 aa13.11□□□□□ -0.31
SMPD4-204ENST00000430682 MDGA1Q8NFP4 955 aa13.11□□□□□ -0.31
SMPD4-204ENST00000430682 EXOC4Q96A65 974 aa13.11□□□□□ -0.31
SMPD4-204ENST00000430682 ERLEC1Q96DZ1 483 aa13.11□□□□□ -0.31
SMPD4-204ENST00000430682 DUSP15Q9H1R2 295 aaPredicted RBP13.11□□□□□ -0.31
SMPD4-204ENST00000430682 SMOC1Q9H4F8 434 aa13.11□□□□□ -0.31
SMPD4-204ENST00000430682 LRRC4Q9HBW1 653 aa13.11□□□□□ -0.31
SMPD4-204ENST00000430682 CD248Q9HCU0 757 aa13.11□□□□□ -0.31
SMPD4-204ENST00000430682 SIX2Q9NPC8 291 aa13.11□□□□□ -0.31
SMPD4-204ENST00000430682 UBE2TQ9NPD8 197 aaPredicted RBP13.11□□□□□ -0.31
SMPD4-204ENST00000430682 DNAJC17Q9NVM6 304 aaKnown RBP13.11□□□□□ -0.31
SMPD4-204ENST00000430682 DEC1Q9P2X7 70 aa13.11□□□□□ -0.31
SMPD4-204ENST00000430682 LSM7Q9UK45 103 aaKnown RBP13.11□□□□□ -0.31
SMPD4-204ENST00000430682 FBXO10Q9UK96 956 aa13.11□□□□□ -0.31
SMPD4-204ENST00000430682 RAB23Q9ULC3 237 aa13.11□□□□□ -0.31
SMPD4-204ENST00000430682 USP18Q9UMW8 372 aa13.11□□□□□ -0.31
SMPD4-204ENST00000430682 NUMA1Q14980 2115 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 MUC22E2RYF6 1773 aaPredicted RBP13.1□□□□□ -0.31
SMPD4-204ENST00000430682 TBC1D3BA6NDS4 549 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 MSI1O43347 362 aaKnown RBP13.1□□□□□ -0.31
SMPD4-204ENST00000430682 GDF9O60383 454 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 PENKP01210 267 aaPredicted RBP13.1□□□□□ -0.31
SMPD4-204ENST00000430682 FYNP06241 537 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 GPD2P43304 727 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 DGKEP52429 567 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 COG7P83436 770 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 C10orf76Q5T2E6 689 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 BTBD8Q5XKL5 378 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 EGFLAMQ63HQ2 1017 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 TRIM65Q6PJ69 517 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.1□□□□□ -0.31
SMPD4-204ENST00000430682 CREBRFQ8IUR6 639 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 FMNL3Q8IVF7 1028 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 MLKLQ8NB16 471 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 TSTD1Q8NFU3 115 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 OLIG1Q8TAK6 271 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 GPT2Q8TD30 523 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 ZC3H10Q96K80 434 aaKnown RBP13.1□□□□□ -0.31
SMPD4-204ENST00000430682 ARRDC1-AS1Q9H2J1 176 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 RXFP3Q9NSD7 469 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 SEMA4GQ9NTN9 838 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 DLL3Q9NYJ7 618 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 TJP2Q9UDY2 1190 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 GMEB2Q9UKD1 530 aa13.1□□□□□ -0.31
SMPD4-204ENST00000430682 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.09□□□□□ -0.31
SMPD4-204ENST00000430682 WASH3PC4AMC7 463 aa13.09□□□□□ -0.31
SMPD4-204ENST00000430682 GFRA2O00451 464 aa13.09□□□□□ -0.31
SMPD4-204ENST00000430682 KRT5P13647 590 aa13.09□□□□□ -0.31
SMPD4-204ENST00000430682 PON1P27169 355 aa13.09□□□□□ -0.31
SMPD4-204ENST00000430682 RPL34P49207 117 aaKnown RBP13.09□□□□□ -0.31
SMPD4-204ENST00000430682 SLC8A3P57103 927 aa13.09□□□□□ -0.31
SMPD4-204ENST00000430682 SF3A2Q15428 464 aaKnown RBP13.09□□□□□ -0.31
SMPD4-204ENST00000430682 TRIP4Q15650 581 aaPredicted RBP13.09□□□□□ -0.31
SMPD4-204ENST00000430682 ARHGAP44Q17R89 818 aa13.09□□□□□ -0.31
SMPD4-204ENST00000430682 GEN1Q17RS7 908 aa13.09□□□□□ -0.31
SMPD4-204ENST00000430682 MIIPQ5JXC2 388 aa13.09□□□□□ -0.31
SMPD4-204ENST00000430682 GRAMD4Q6IC98 578 aa13.09□□□□□ -0.31
SMPD4-204ENST00000430682 KIAA1211LQ6NV74 962 aa13.09□□□□□ -0.31
SMPD4-204ENST00000430682 RSRC2Q7L4I2 434 aaKnown RBP13.09□□□□□ -0.31
SMPD4-204ENST00000430682 CACNA2D4Q7Z3S7 1137 aa13.09□□□□□ -0.31
SMPD4-204ENST00000430682 FAM217AQ8IXS0 508 aa13.09□□□□□ -0.31
SMPD4-204ENST00000430682 SCML4Q8N228 414 aa13.09□□□□□ -0.31
SMPD4-204ENST00000430682 ARHGAP18Q8N392 663 aa13.09□□□□□ -0.31
SMPD4-204ENST00000430682 WDTC1Q8N5D0 677 aa13.09□□□□□ -0.31
SMPD4-204ENST00000430682 ZNF513Q8N8E2 541 aaPredicted RBP13.09□□□□□ -0.31
SMPD4-204ENST00000430682 RLN3Q8WXF3 142 aa13.09□□□□□ -0.31
SMPD4-204ENST00000430682 IPO9Q96P70 1041 aaKnown RBP13.09□□□□□ -0.31
SMPD4-204ENST00000430682 MIS12Q9H081 205 aa13.09□□□□□ -0.31
SMPD4-204ENST00000430682 CNGB3Q9NQW8 809 aa13.09□□□□□ -0.31
SMPD4-204ENST00000430682 WDR35Q9P2L0 1181 aa13.09□□□□□ -0.31
SMPD4-204ENST00000430682 STARD13Q9Y3M8 1113 aa13.09□□□□□ -0.31
SMPD4-204ENST00000430682 ASCC3Q8N3C0 2202 aaKnown RBP13.08□□□□□ -0.32
SMPD4-204ENST00000430682 A0A1W2PQF6 199 aa13.08□□□□□ -0.32
SMPD4-204ENST00000430682 TSPAN3O60637 253 aa13.08□□□□□ -0.32
SMPD4-204ENST00000430682 LETM1O95202 739 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-204ENST00000430682 EPN2O95208 641 aa13.08□□□□□ -0.32
SMPD4-204ENST00000430682 PNMA6AP0CW24 399 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-204ENST00000430682 ANP32AP39687 249 aaKnown RBP13.08□□□□□ -0.32
SMPD4-204ENST00000430682 DGKGP49619 791 aa13.08□□□□□ -0.32
SMPD4-204ENST00000430682 SGSHP51688 502 aa13.08□□□□□ -0.32
SMPD4-204ENST00000430682 GOLGA8FQ08AF8 430 aa13.08□□□□□ -0.32
SMPD4-204ENST00000430682 GOLGA8DPQ0D2H9 430 aa13.08□□□□□ -0.32
SMPD4-204ENST00000430682 CETN1Q12798 172 aa13.08□□□□□ -0.32
SMPD4-204ENST00000430682 TMEM215Q68D42 235 aa13.08□□□□□ -0.32
SMPD4-204ENST00000430682 MSANTD2Q6P1R3 559 aa13.08□□□□□ -0.32
SMPD4-204ENST00000430682 TADA2BQ86TJ2 420 aa13.08□□□□□ -0.32
SMPD4-204ENST00000430682 SCUBE3Q8IX30 993 aa13.08□□□□□ -0.32
SMPD4-204ENST00000430682 SIX6OS1Q8N1H7 587 aa13.08□□□□□ -0.32
SMPD4-204ENST00000430682 ZNF606Q8WXB4 792 aa13.08□□□□□ -0.32
SMPD4-204ENST00000430682 MYEOVQ96EZ4 313 aa13.08□□□□□ -0.32
SMPD4-204ENST00000430682 PIWIL1Q96J94 861 aaKnown RBP13.08□□□□□ -0.32
SMPD4-204ENST00000430682 CDK5RAP1Q96SZ6 601 aaKnown RBP13.08□□□□□ -0.32
SMPD4-204ENST00000430682 NUP62CLQ9H1M0 184 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms