RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 NFIL3Q16649 462 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 FBXO47Q5MNV8 452 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 WDR49Q8IV35 697 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 SEMA4DQ92854 862 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 MAP3K14Q99558 947 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 KCTD14Q9BQ13 255 aaPredicted RBP15.81■□□□□ 0.12
PTPRF-206ENST00000429895 SYT15Q9BQS2 421 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 OSBPL6Q9BZF3 934 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 PCDHB5Q9Y5E4 795 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 RRM1P23921 792 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 TBX4P57082 545 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 ATG16L2Q8NAA4 619 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 TAS1R2Q8TE23 839 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 ATP8B4Q8TF62 1192 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 PAFAH2Q99487 392 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 RSPH9Q9H1X1 276 aaPredicted RBP15.81■□□□□ 0.12
PTPRF-206ENST00000429895 EFCAB1Q9HAE3 211 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 VANGL2Q9ULK5 521 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 SNCAIPQ9Y6H5 919 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 LTFP02788 710 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 NOS3P29474 1203 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 AQP5P55064 265 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 VAC14Q08AM6 782 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 ADIGQ0VDE8 80 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 HLA-DQA1Q5Y7H0 255 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 POMGNT2Q8NAT1 580 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 FAM120BQ96EK7 910 aaKnown RBP15.81■□□□□ 0.12
PTPRF-206ENST00000429895 SEPT3Q9UH03 358 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 TK2O00142 265 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 O00370 1275 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 OR1E1P30953 314 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 HIRAP54198 1017 aaPredicted RBP15.81■□□□□ 0.12
PTPRF-206ENST00000429895 AMPD2Q01433 879 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 BNC2Q6ZN30 1099 aaPredicted RBP15.81■□□□□ 0.12
PTPRF-206ENST00000429895 SIX5Q8N196 739 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 ADAM32Q8TC27 787 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 RNPEPQ9H4A4 650 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 DLGAP2Q9P1A6 1054 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 TUBGCP4Q9UGJ1 667 aa15.81■□□□□ 0.12
PTPRF-206ENST00000429895 PPIEQ9UNP9 301 aaKnown RBP15.81■□□□□ 0.12
PTPRF-206ENST00000429895 TSC22D2O75157 780 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 CLTBP09497 229 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 GSSP48637 474 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 CCT8P50990 548 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 PCNX4Q63HM2 1172 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 IQSEC2Q5JU85 1478 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 BGNP21810 368 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 SARSP49591 514 aaKnown RBP15.8■□□□□ 0.12
PTPRF-206ENST00000429895 NCF4Q15080 339 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 PTGISQ16647 500 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 PRR23CQ6ZRP0 262 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 CSGALNACT1Q8TDX6 532 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 FIG4Q92562 907 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 FRMD8P1Q9BZ68 369 aaPredicted RBP15.8■□□□□ 0.12
PTPRF-206ENST00000429895 ATP13A1Q9HD20 1204 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 RGS18Q9NS28 235 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 TBC1D13Q9NVG8 400 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 PCDHGA4Q9Y5G9 962 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 MOXD2PA6NHM9 499 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 H3BRB1 525 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 PRKAA1Q13131 559 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 NLRP9Q7RTR0 991 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 COL23A1Q86Y22 540 aaPredicted RBP15.8■□□□□ 0.12
PTPRF-206ENST00000429895 GATAD2AQ86YP4 633 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 AKT1S1Q96B36 256 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 TUT1Q9H6E5 874 aaKnown RBP15.8■□□□□ 0.12
PTPRF-206ENST00000429895 FAM25AB3EWG3 89 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 FAM25CB3EWG5 89 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 FAM25GB3EWG6 89 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 INSRRP14616 1297 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 CYP2A7P20853 494 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 PTPN11Q06124 597 aaPredicted RBP15.8■□□□□ 0.12
PTPRF-206ENST00000429895 TPD52L3Q96J77 140 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 CATSPER2Q96P56 530 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 ERGIC2Q96RQ1 377 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 MTG1Q9BT17 334 aaPredicted RBP15.8■□□□□ 0.12
PTPRF-206ENST00000429895 MFSD1Q9H3U5 465 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 DUSP10Q9Y6W6 482 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 CCR1P32246 355 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 GRK4P32298 578 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 NUP62P37198 522 aaPredicted RBP15.8■□□□□ 0.12
PTPRF-206ENST00000429895 MPP3Q13368 585 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 UTP15Q8TED0 518 aaKnown RBP15.8■□□□□ 0.12
PTPRF-206ENST00000429895 MTFMTQ96DP5 389 aaKnown RBP15.8■□□□□ 0.12
PTPRF-206ENST00000429895 SH3GL3Q99963 347 aa15.8■□□□□ 0.12
PTPRF-206ENST00000429895 IFNA14P01570 189 aa15.79■□□□□ 0.12
PTPRF-206ENST00000429895 EIF2S1P05198 315 aaKnown RBP15.79■□□□□ 0.12
PTPRF-206ENST00000429895 PLD1Q13393 1074 aa15.79■□□□□ 0.12
PTPRF-206ENST00000429895 MARC1Q5VT66 337 aa15.79■□□□□ 0.12
PTPRF-206ENST00000429895 MAP1SQ66K74 1059 aaPredicted RBP15.79■□□□□ 0.12
PTPRF-206ENST00000429895 PDPK2PQ6A1A2 396 aa15.79■□□□□ 0.12
PTPRF-206ENST00000429895 DAGLBQ8NCG7 672 aa15.79■□□□□ 0.12
PTPRF-206ENST00000429895 USP6NLQ92738 828 aa15.79■□□□□ 0.12
PTPRF-206ENST00000429895 TMEM159Q96B96 161 aa15.79■□□□□ 0.12
PTPRF-206ENST00000429895 CNPY3Q9BT09 278 aa15.79■□□□□ 0.12
PTPRF-206ENST00000429895 ATP6V1HQ9UI12 483 aa15.79■□□□□ 0.12
PTPRF-206ENST00000429895 CRYMQ14894 314 aa15.79■□□□□ 0.12
PTPRF-206ENST00000429895 UXS1Q8NBZ7 420 aa15.79■□□□□ 0.12
PTPRF-206ENST00000429895 NLNQ9BYT8 704 aa15.79■□□□□ 0.12
PTPRF-206ENST00000429895 ZMYM5Q9UJ78 669 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms