RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 MFHAS1Q9Y4C4 1052 aa9.25□□□□□ -0.93
SMC6-204ENST00000428868 C5orf42Q9H799 3197 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 FAM72CH0Y354 149 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 RFXAPO00287 272 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 PRRG1O14668 218 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 IRAK2O43187 625 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 CTIFO43310 598 aaKnown RBP9.24□□□□□ -0.93
SMC6-204ENST00000428868 RTN3O95197 1032 aaPredicted RBP9.24□□□□□ -0.93
SMC6-204ENST00000428868 RARGP13631 454 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 EPCAMP16422 314 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 IL4RP24394 825 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 RDXP35241 583 aaKnown RBP9.24□□□□□ -0.93
SMC6-204ENST00000428868 GTF2F1P35269 517 aaKnown RBP eCLIP9.24□□□□□ -0.93
SMC6-204ENST00000428868 PAFAH1B1P43034 410 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 CLCN4P51793 760 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 CDH6P55285 790 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 KLF1Q13351 362 aaPredicted RBP9.24□□□□□ -0.93
SMC6-204ENST00000428868 EIF4EBP2Q13542 120 aaPredicted RBP9.24□□□□□ -0.93
SMC6-204ENST00000428868 DPYSL3Q14195 570 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 TAZQ16635 292 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 HADHQ16836 314 aaKnown RBP9.24□□□□□ -0.93
SMC6-204ENST00000428868 ARTNQ5T4W7 220 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 FAM72AQ5TYM5 149 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 FAM72DQ6L9T8 149 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 TTC27Q6P3X3 843 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 TMEM150AQ86TG1 271 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 FAM72BQ86X60 149 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 KLHL7Q8IXQ5 586 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 GPR65Q8IYL9 337 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 TCEAL8Q8IYN2 117 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 HS6ST3Q8IZP7 471 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 PRELID2Q8N945 189 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 MRPL43Q8N983 215 aaKnown RBP9.24□□□□□ -0.93
SMC6-204ENST00000428868 CMASQ8NFW8 434 aaPredicted RBP9.24□□□□□ -0.93
SMC6-204ENST00000428868 SLC22A17Q8WUG5 538 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 HDAC7Q8WUI4 952 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 C1orf54Q8WWF1 131 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 ATG4AQ8WYN0 398 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 HAUS1Q96CS2 278 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 LRCH3Q96II8 777 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 KRT12Q99456 494 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 HINFPQ9BQA5 517 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 OSBPL8Q9BZF1 889 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 SMOC2Q9H3U7 446 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 FBXO44Q9H4M3 255 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 ANKZF1Q9H8Y5 726 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 IL21Q9HBE4 155 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 ABCC13Q9NSE7 274 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.24□□□□□ -0.93
SMC6-204ENST00000428868 DDIT4Q9NX09 232 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 DDX56Q9NY93 547 aaKnown RBP9.24□□□□□ -0.93
SMC6-204ENST00000428868 STAP1Q9ULZ2 295 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.24□□□□□ -0.93
SMC6-204ENST00000428868 RWDD3Q9Y3V2 267 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 IRAK3Q9Y616 596 aa9.24□□□□□ -0.93
SMC6-204ENST00000428868 ZSCAN5CA6NGD5 496 aaPredicted RBP9.23□□□□□ -0.93
SMC6-204ENST00000428868 EFCAB8A8MWE9 144 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 H3BNC9 293 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 KRIT1O00522 736 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 SOX1O00570 391 aaPredicted RBP9.23□□□□□ -0.93
SMC6-204ENST00000428868 PER2O15055 1255 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 CCL16O15467 120 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 RAD51CO43502 376 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 CLASP2O75122 1294 aaKnown RBP9.23□□□□□ -0.93
SMC6-204ENST00000428868 RFPL2O75678 378 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 ZRANB2O95218 330 aaKnown RBP eCLIP9.23□□□□□ -0.931e-8■■■■■ 54.5
SMC6-204ENST00000428868 RB1P06400 928 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 ADH1AP07327 375 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 C8AP07357 584 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 KRT7P08729 469 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 RHOXF2BP0C7M4 288 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 PECAM1P16284 738 aaPredicted RBP9.23□□□□□ -0.93
SMC6-204ENST00000428868 KLRC2P26717 231 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 L1CAMP32004 1257 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 KCNJ1P48048 391 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 TUFMP49411 452 aaKnown RBP9.23□□□□□ -0.93
SMC6-204ENST00000428868 CXCR3P49682 368 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 DYNLT1P63172 113 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 UBE3AQ05086 875 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 EFEMP1Q12805 493 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 PPP6R3Q5H9R7 873 aaPredicted RBP9.23□□□□□ -0.93
SMC6-204ENST00000428868 ERMARDQ5T6L9 678 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 MSANTD2Q6P1R3 559 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 NPNTQ6UXI9 565 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 MON1AQ86VX9 555 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 TMC8Q8IU68 726 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 RCOR2Q8IZ40 523 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 MMGT1Q8N4V1 131 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 PQLC3Q8N755 202 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 NETO2Q8NC67 525 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 KREMEN2Q8NCW0 462 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 FAM71BQ8TC56 605 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 TEKT4Q8WW24 435 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 ARNTL2Q8WYA1 636 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 GOLGA1Q92805 767 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 WBP2Q969T9 261 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 PGAP3Q96FM1 320 aaPredicted RBP9.23□□□□□ -0.93
SMC6-204ENST00000428868 RBM41Q96IZ5 413 aaKnown RBP9.23□□□□□ -0.93
SMC6-204ENST00000428868 PNKPQ96T60 521 aa9.23□□□□□ -0.93
SMC6-204ENST00000428868 RHOXF2Q9BQY4 288 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms