RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 STAP1Q9ULZ2 295 aa10.8□□□□□ -0.68
HDAC9-210ENST00000428307 GMNCA6NCL1 334 aa10.8□□□□□ -0.68
HDAC9-210ENST00000428307 MOXD2PA6NHM9 499 aa10.8□□□□□ -0.68
HDAC9-210ENST00000428307 CDH16O75309 829 aa10.8□□□□□ -0.68
HDAC9-210ENST00000428307 DDHD2O94830 711 aa10.8□□□□□ -0.68
HDAC9-210ENST00000428307 HTRA3P83110 453 aa10.8□□□□□ -0.68
HDAC9-210ENST00000428307 IFRD2Q12894 506 aaPredicted RBP10.8□□□□□ -0.68
HDAC9-210ENST00000428307 LRRC14Q15048 493 aa10.8□□□□□ -0.68
HDAC9-210ENST00000428307 GLB1LQ6UWU2 654 aa10.8□□□□□ -0.68
HDAC9-210ENST00000428307 C3orf62Q6ZUJ4 267 aa10.8□□□□□ -0.68
HDAC9-210ENST00000428307 NLRP14Q86W24 1093 aa10.8□□□□□ -0.68
HDAC9-210ENST00000428307 SRRM1Q8IYB3 904 aaKnown RBP10.8□□□□□ -0.68
HDAC9-210ENST00000428307 PDIK1LQ8N165 341 aa10.8□□□□□ -0.68
HDAC9-210ENST00000428307 FBXO36Q8NEA4 188 aa10.8□□□□□ -0.68
HDAC9-210ENST00000428307 MGARPQ8TDB4 240 aa10.8□□□□□ -0.68
HDAC9-210ENST00000428307 SMARCD1Q96GM5 515 aa10.8□□□□□ -0.68
HDAC9-210ENST00000428307 TTC25Q96NG3 672 aa10.8□□□□□ -0.68
HDAC9-210ENST00000428307 ACBD6Q9BR61 282 aa10.8□□□□□ -0.68
HDAC9-210ENST00000428307 HMX1Q9NP08 348 aaPredicted RBP10.8□□□□□ -0.68
HDAC9-210ENST00000428307 INTS9Q9NV88 658 aaKnown RBP10.8□□□□□ -0.68
HDAC9-210ENST00000428307 PDCD11Q14690 1871 aaKnown RBP10.79□□□□□ -0.68
HDAC9-210ENST00000428307 ANKRD65E5RJM6 399 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 TRAPPC3O43617 180 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 TCEA3O75764 348 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 APRTP07741 180 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 SKIP12755 728 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 IFNAR2P48551 515 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 GPX6P59796 221 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 TMED2Q15363 201 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 INTS6LQ5JSJ4 861 aaKnown RBP10.79□□□□□ -0.68
HDAC9-210ENST00000428307 TRAF7Q6Q0C0 670 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 SLC24A5Q71RS6 500 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 VSIG1Q86XK7 387 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 PXYLP1Q8TE99 480 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 SLC2A13Q96QE2 648 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 LGMNQ99538 433 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 WDR83Q9BRX9 315 aaKnown RBP10.79□□□□□ -0.68
HDAC9-210ENST00000428307 MLXIPLQ9NP71 852 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 CNGB3Q9NQW8 809 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 RGS18Q9NS28 235 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 DTLQ9NZJ0 730 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 PAK5Q9P286 719 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 PTCH2Q9Y6C5 1203 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 TMEM120BA0PK00 339 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 BCLAF3A2AJT9 711 aaKnown RBP10.79□□□□□ -0.68
HDAC9-210ENST00000428307 C9IYK1 514 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 HHLA1C9JL84 531 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 F5H423 210 aaPredicted RBP10.79□□□□□ -0.68
HDAC9-210ENST00000428307 NDC80O14777 642 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 FBXO21O94952 628 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 LTFP02788 710 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 AMHP03971 560 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 ABHD2P08910 425 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 OR4Q2P0C623 313 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 GCAP28676 217 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 RAB41Q5JT25 222 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 CLLU1OSQ5K130 101 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 NCBP2-AS2Q69YL0 99 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 FAM171BQ6P995 826 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 DCLRE1AQ6PJP8 1040 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 IGDCC3Q8IVU1 814 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 PALM2Q8IXS6 379 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 SCAMP5Q8TAC9 235 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 RNF139Q8WU17 664 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 LINC01599Q8WXQ3 324 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 XPO6Q96QU8 1125 aaKnown RBP10.79□□□□□ -0.68
HDAC9-210ENST00000428307 PRMT1Q99873 361 aaKnown RBP10.79□□□□□ -0.68
HDAC9-210ENST00000428307 ANLNQ9NQW6 1124 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 ARHGEF4Q9NR80 690 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 DDIT4Q9NX09 232 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 CHMP2BQ9UQN3 213 aa10.79□□□□□ -0.68
HDAC9-210ENST00000428307 PRG3Q9Y2Y8 225 aaPredicted RBP10.79□□□□□ -0.68
HDAC9-210ENST00000428307 CLUHO75153 1309 aa10.78□□□□□ -0.68
HDAC9-210ENST00000428307 MKI67P46013 3256 aaKnown RBP10.78□□□□□ -0.68
HDAC9-210ENST00000428307 FAM72CH0Y354 149 aa10.78□□□□□ -0.68
HDAC9-210ENST00000428307 I6L893 689 aaPredicted RBP10.78□□□□□ -0.68
HDAC9-210ENST00000428307 M0QZQ0 153 aa10.78□□□□□ -0.68
HDAC9-210ENST00000428307 EBAG9O00559 213 aa10.78□□□□□ -0.68
HDAC9-210ENST00000428307 FAM107AO95990 144 aa10.78□□□□□ -0.68
HDAC9-210ENST00000428307 CYP11A1P05108 521 aa10.78□□□□□ -0.68
HDAC9-210ENST00000428307 BRAFP15056 766 aa10.78□□□□□ -0.68
HDAC9-210ENST00000428307 ZFXP17010 805 aaPredicted RBP10.78□□□□□ -0.68
HDAC9-210ENST00000428307 ATP5DP30049 168 aa10.78□□□□□ -0.68
HDAC9-210ENST00000428307 OR1G1P47890 313 aa10.78□□□□□ -0.68
HDAC9-210ENST00000428307 NR2C2P49116 596 aa10.78□□□□□ -0.68
HDAC9-210ENST00000428307 RNASELQ05823 741 aaKnown RBP10.78□□□□□ -0.68
HDAC9-210ENST00000428307 SF3A3Q12874 501 aaKnown RBP eCLIP10.78□□□□□ -0.68
HDAC9-210ENST00000428307 SLC45A4Q5BKX6 768 aa10.78□□□□□ -0.68
HDAC9-210ENST00000428307 EFHC2Q5JST6 749 aa10.78□□□□□ -0.68
HDAC9-210ENST00000428307 FAM72AQ5TYM5 149 aa10.78□□□□□ -0.68
HDAC9-210ENST00000428307 FAM72DQ6L9T8 149 aa10.78□□□□□ -0.68
HDAC9-210ENST00000428307 TAX1BP1Q86VP1 789 aa10.78□□□□□ -0.68
HDAC9-210ENST00000428307 FAM72BQ86X60 149 aa10.78□□□□□ -0.68
HDAC9-210ENST00000428307 REM2Q8IYK8 340 aaPredicted RBP10.78□□□□□ -0.68
HDAC9-210ENST00000428307 THEM5Q8N1Q8 247 aa10.78□□□□□ -0.68
HDAC9-210ENST00000428307 ANKRD42Q8N9B4 389 aa10.78□□□□□ -0.68
HDAC9-210ENST00000428307 ZNF473Q8WTR7 871 aaKnown RBP10.78□□□□□ -0.68
HDAC9-210ENST00000428307 ETNK1Q9HBU6 452 aa10.78□□□□□ -0.68
HDAC9-210ENST00000428307 CSNK1G1Q9HCP0 422 aa10.78□□□□□ -0.68
HDAC9-210ENST00000428307 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms