RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 GABRG3Q99928 467 aa10.74□□□□□ -0.69
HDLBP-213ENST00000427007 SCNM1Q9BWG6 230 aa10.74□□□□□ -0.69
HDLBP-213ENST00000427007 DUSP16Q9BY84 665 aa10.74□□□□□ -0.69
HDLBP-213ENST00000427007 ADAM33Q9BZ11 813 aa10.74□□□□□ -0.69
HDLBP-213ENST00000427007 SLC32A1Q9H598 525 aa10.74□□□□□ -0.69
HDLBP-213ENST00000427007 CD248Q9HCU0 757 aa10.74□□□□□ -0.69
HDLBP-213ENST00000427007 ZMIZ1Q9ULJ6 1067 aa10.74□□□□□ -0.69
HDLBP-213ENST00000427007 HYAL3O43820 417 aaPredicted RBP10.73□□□□□ -0.69
HDLBP-213ENST00000427007 NDUFS2O75306 463 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 ZNF217O75362 1048 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 KLKB1P03952 638 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 SERPINF2P08697 491 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 RALAP11233 206 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 PSMC2P35998 433 aaKnown RBP10.73□□□□□ -0.69
HDLBP-213ENST00000427007 PSEN1P49768 467 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 KRT85P78386 507 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 GFPT1Q06210 699 aaPredicted RBP10.73□□□□□ -0.69
HDLBP-213ENST00000427007 NFIL3Q16649 462 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 GEN1Q17RS7 908 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 CCDC186Q7Z3E2 898 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 TADA2BQ86TJ2 420 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 RGL4Q8IZJ4 473 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 HDDC3Q8N4P3 179 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 MINDY1Q8N5J2 469 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 CEP76Q8TAP6 659 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 SEMA4DQ92854 862 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 MRGPRX1Q96LB2 322 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 ARID3AQ99856 593 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 TMEM121BQ9BXQ6 578 aaPredicted RBP10.73□□□□□ -0.69
HDLBP-213ENST00000427007 GOLPH3LQ9H4A5 285 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 CAPN10Q9HC96 672 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 TMEM8AQ9HCN3 771 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 ZDHHC9Q9Y397 364 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 USP3Q9Y6I4 520 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 STON1Q9Y6Q2 735 aa10.73□□□□□ -0.69
HDLBP-213ENST00000427007 OPHN1O60890 802 aa10.72□□□□□ -0.69
HDLBP-213ENST00000427007 RPL13P26373 211 aaKnown RBP10.72□□□□□ -0.69
HDLBP-213ENST00000427007 MAOBP27338 520 aa10.72□□□□□ -0.69
HDLBP-213ENST00000427007 CORO1AP31146 461 aaKnown RBP10.72□□□□□ -0.69
HDLBP-213ENST00000427007 HOXD12P35452 270 aa10.72□□□□□ -0.69
HDLBP-213ENST00000427007 IL12RB1P42701 662 aa10.72□□□□□ -0.69
HDLBP-213ENST00000427007 MXI1P50539 228 aa10.72□□□□□ -0.69
HDLBP-213ENST00000427007 MFAP3P55082 362 aa10.72□□□□□ -0.69
HDLBP-213ENST00000427007 SIM1P81133 766 aaPredicted RBP10.72□□□□□ -0.69
HDLBP-213ENST00000427007 SEMA3BQ13214 749 aa10.72□□□□□ -0.69
HDLBP-213ENST00000427007 FUT11Q495W5 492 aa10.72□□□□□ -0.69
HDLBP-213ENST00000427007 FYB2Q5VWT5 728 aa10.72□□□□□ -0.69
HDLBP-213ENST00000427007 KRT39Q6A163 491 aa10.72□□□□□ -0.69
HDLBP-213ENST00000427007 KRBA2Q6ZNG9 492 aa10.72□□□□□ -0.69
HDLBP-213ENST00000427007 PIGZQ86VD9 579 aa10.72□□□□□ -0.69
HDLBP-213ENST00000427007 CACUL1Q86Y37 369 aa10.72□□□□□ -0.69
HDLBP-213ENST00000427007 DENND1CQ8IV53 801 aa10.72□□□□□ -0.69
HDLBP-213ENST00000427007 SMYD4Q8IYR2 804 aaPredicted RBP10.72□□□□□ -0.69
HDLBP-213ENST00000427007 GUF1Q8N442 669 aaKnown RBP10.72□□□□□ -0.69
HDLBP-213ENST00000427007 SLC4A11Q8NBS3 891 aa10.72□□□□□ -0.69
HDLBP-213ENST00000427007 TMEM176AQ96HP8 235 aa10.72□□□□□ -0.69
HDLBP-213ENST00000427007 DNAI2Q9GZS0 605 aa10.72□□□□□ -0.69
HDLBP-213ENST00000427007 CISHQ9NSE2 258 aa10.72□□□□□ -0.69
HDLBP-213ENST00000427007 CLIC5Q9NZA1 410 aa10.72□□□□□ -0.69
HDLBP-213ENST00000427007 FBXO10Q9UK96 956 aa10.72□□□□□ -0.69
HDLBP-213ENST00000427007 AGO1Q9UL18 857 aaKnown RBP10.72□□□□□ -0.69
HDLBP-213ENST00000427007 ASPMQ8IZT6 3477 aa10.72□□□□□ -0.69
HDLBP-213ENST00000427007 WDFY3Q8IZQ1 3526 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 FAM237AA0A1B0GTK4 181 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 A0A1W2PQD8 194 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 SLC12A8A0AV02 714 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 TULP2O00295 520 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 GFRA2O00451 464 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 ARHGAP33O14559 1287 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 PENKP01210 267 aaPredicted RBP10.71□□□□□ -0.69
HDLBP-213ENST00000427007 CHKAP35790 457 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 PI4KAP42356 2102 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 RAD23BP54727 409 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 YWHAGP61981 247 aaKnown RBP eCLIP10.71□□□□□ -0.69
HDLBP-213ENST00000427007 FAM193AP78312 1265 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 COG7P83436 770 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 STARD3Q14849 445 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 PLEKHG6Q3KR16 790 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 ZCWPW2Q504Y3 356 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 RSRC2Q7L4I2 434 aaKnown RBP10.71□□□□□ -0.69
HDLBP-213ENST00000427007 RABEPKQ7Z6M1 372 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 PIP4P1Q86T03 277 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 ASCC3Q8N3C0 2202 aaKnown RBP10.71□□□□□ -0.69
HDLBP-213ENST00000427007 ZNF276Q8N554 614 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 FBXL13Q8NEE6 735 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 NDRG1Q92597 394 aaKnown RBP10.71□□□□□ -0.69
HDLBP-213ENST00000427007 GATA6Q92908 595 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 TATDN2Q93075 761 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 ZNF419Q96HQ0 510 aaPredicted RBP10.71□□□□□ -0.69
HDLBP-213ENST00000427007 CDK5RAP1Q96SZ6 601 aaKnown RBP10.71□□□□□ -0.69
HDLBP-213ENST00000427007 MKRN2Q9H000 416 aaKnown RBP10.71□□□□□ -0.69
HDLBP-213ENST00000427007 PRDM16Q9HAZ2 1276 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 RAB20Q9NX57 234 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 KLK13Q9UKR3 277 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 CLEC4EQ9ULY5 219 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 ZNF510Q9Y2H8 683 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 SLC27A6Q9Y2P4 619 aa10.71□□□□□ -0.69
HDLBP-213ENST00000427007 CFAP47Q6ZTR5 3102 aa10.71□□□□□ -0.7
HDLBP-213ENST00000427007 AKAP13Q12802 2813 aa10.7□□□□□ -0.7
HDLBP-213ENST00000427007 MEI4A8MW99 385 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms