RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 BBS2Q9BXC9 721 aa13.34□□□□□ -0.27
GPC1-204ENST00000426280 DNAI2Q9GZS0 605 aa13.34□□□□□ -0.27
GPC1-204ENST00000426280 NDST4Q9H3R1 872 aa13.34□□□□□ -0.27
GPC1-204ENST00000426280 TAB2Q9NYJ8 693 aa13.34□□□□□ -0.27
GPC1-204ENST00000426280 APEX2Q9UBZ4 518 aa13.34□□□□□ -0.27
GPC1-204ENST00000426280 PIEZO1Q92508 2521 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 GOLGA6L7A0A1B0GV03 622 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 KCNJ18B7U540 433 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 PAPSS1O43252 624 aaPredicted RBP13.33□□□□□ -0.28
GPC1-204ENST00000426280 ATG13O75143 517 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 APODP05090 189 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 USP8P40818 1118 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 EIF2DP41214 584 aaKnown RBP13.33□□□□□ -0.28
GPC1-204ENST00000426280 GRIA2P42262 883 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 KLK7P49862 253 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 SGSHP51688 502 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 NRLP54845 237 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 PITX1P78337 314 aaPredicted RBP13.33□□□□□ -0.28
GPC1-204ENST00000426280 MYL5Q02045 173 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 SIM2Q14190 667 aaPredicted RBP13.33□□□□□ -0.28
GPC1-204ENST00000426280 KCNJ12Q14500 433 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 TAF5Q15542 800 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 TRIP4Q15650 581 aaPredicted RBP13.33□□□□□ -0.28
GPC1-204ENST00000426280 CDKAL1Q5VV42 579 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 FYB2Q5VWT5 728 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 SYPL2Q5VXT5 272 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 KBTBD6Q86V97 674 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 DHX40Q8IX18 779 aaKnown RBP13.33□□□□□ -0.28
GPC1-204ENST00000426280 SCML4Q8N228 414 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 RUBCNQ92622 972 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 MYEOVQ96EZ4 313 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 SLC4A5Q9BY07 1137 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 HSD3B7Q9H2F3 369 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 CNGB3Q9NQW8 809 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 MARK1Q9P0L2 795 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 DEC1Q9P2X7 70 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 LSM7Q9UK45 103 aaKnown RBP13.33□□□□□ -0.28
GPC1-204ENST00000426280 FBXO10Q9UK96 956 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 NAALADL1Q9UQQ1 740 aa13.33□□□□□ -0.28
GPC1-204ENST00000426280 EML5Q05BV3 1969 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 GTPBP10A4D1E9 387 aaKnown RBP13.32□□□□□ -0.28
GPC1-204ENST00000426280 TBC1D3BA6NDS4 549 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 WASH3PC4AMC7 463 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 GFRA2O00451 464 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 THAP12O43422 761 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 CACNG3O60359 315 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 TSPAN3O60637 253 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 PRKCSHP14314 528 aaPredicted RBP13.32□□□□□ -0.28
GPC1-204ENST00000426280 TNFRSF4P43489 277 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 ZNF165P49910 485 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 MFAP3P55082 362 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 SLC8A3P57103 927 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 COG7P83436 770 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 PPP2R5DQ14738 602 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 IQCB1Q15051 598 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 CCDC6Q16204 474 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 EGFLAMQ63HQ2 1017 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 RSRC2Q7L4I2 434 aaKnown RBP13.32□□□□□ -0.28
GPC1-204ENST00000426280 SLC47A2Q86VL8 602 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 FAM114A1Q8IWE2 563 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 SIX6OS1Q8N1H7 587 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 ARHGAP18Q8N392 663 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 FAM160A2Q8N612 972 aaPredicted RBP13.32□□□□□ -0.28
GPC1-204ENST00000426280 TERB1Q8NA31 727 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 HSFY1Q96LI6 401 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 TPSD1Q9BZJ3 242 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 PLCB1Q9NQ66 1216 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 ABCC13Q9NSE7 274 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 DNAJC17Q9NVM6 304 aaKnown RBP13.32□□□□□ -0.28
GPC1-204ENST00000426280 MMP17Q9ULZ9 603 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 FHOD1Q9Y613 1164 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 GPR179Q6PRD1 2367 aa13.32□□□□□ -0.28
GPC1-204ENST00000426280 E5RJQ4 531 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 AXIN1O15169 862 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 EPHB6O15197 1021 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 PENKP01210 267 aaPredicted RBP13.31□□□□□ -0.28
GPC1-204ENST00000426280 LTFP02788 710 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 GNA15P30679 374 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 SLC6A4P31645 630 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 MRPS21P82921 87 aaKnown RBP13.31□□□□□ -0.28
GPC1-204ENST00000426280 SPEM2Q0P670 501 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 CRY1Q16526 586 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 GEN1Q17RS7 908 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 TCP11X2Q5H9J9 407 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 C10orf76Q5T2E6 689 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 TMEM215Q68D42 235 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 NADSYN1Q6IA69 706 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 GRAMD4Q6IC98 578 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 MSANTD2Q6P1R3 559 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 PASD1Q8IV76 773 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 FAM217AQ8IXS0 508 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 CAMKK1Q8N5S9 505 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 MDGA1Q8NFP4 955 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 ADAM32Q8TC27 787 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 GAB3Q8WWW8 586 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 RLN3Q8WXF3 142 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 BPIFA3Q9BQP9 254 aa13.31□□□□□ -0.28
GPC1-204ENST00000426280 NAA15Q9BXJ9 866 aaKnown RBP13.31□□□□□ -0.28
GPC1-204ENST00000426280 NAT10Q9H0A0 1025 aaKnown RBP13.31□□□□□ -0.28
GPC1-204ENST00000426280 VPS16Q9H269 839 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms