RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 HDAC4P56524 1084 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 TAS2R40P59535 323 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 COG7P83436 770 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 NME3Q13232 169 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 NNTQ13423 1086 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 MTMR3Q13615 1198 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 PPP2R5DQ14738 602 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 PPP2R5EQ16537 467 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 BRMS1LQ5PSV4 323 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 C10orf120Q5SQS8 335 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 SH3PXD2AQ5TCZ1 1133 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 TRNP1Q6NT89 227 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 MSANTD2Q6P1R3 559 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 BNIPLQ7Z465 357 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 VSIG1Q86XK7 387 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 UNC45BQ8IWX7 931 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 ARFGAP1Q8N6T3 406 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 GCNAQ96QF7 691 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 NACA2Q9H009 215 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 ZNF576Q9H609 170 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 FAM204AQ9H8W3 233 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 ZWILCHQ9H900 591 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 L2HGDHQ9H9P8 463 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 NMUR1Q9HB89 426 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 HOMER3Q9NSC5 361 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.75□□□□□ -0.69
MDC1-205ENST00000425072 DDIT4Q9NX09 232 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 GMIPQ9P107 970 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 STIM2Q9P246 746 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 DNMT3LQ9UJW3 386 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 MRFAP1Q9Y605 127 aa10.75□□□□□ -0.69
MDC1-205ENST00000425072 PATJQ8NI35 1801 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 SOX1O00570 391 aaPredicted RBP10.74□□□□□ -0.69
MDC1-205ENST00000425072 ZNF197O14709 1029 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 PER2O15055 1255 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 SRGAP2O75044 1071 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 TJP3O95049 919 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 RARAP10276 462 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 PYGMP11217 842 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 KDELR1P24390 212 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 DNA2P51530 1060 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 SLC25A11Q02978 314 aaKnown RBP10.74□□□□□ -0.69
MDC1-205ENST00000425072 TFDP2Q14188 446 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 KRT81Q14533 505 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 DUSP6Q16828 381 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 LONRF2Q1L5Z9 754 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 EFHC2Q5JST6 749 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 RBM23Q86U06 439 aaKnown RBP10.74□□□□□ -0.69
MDC1-205ENST00000425072 CREG2Q8IUH2 290 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 CCDC50Q8IVM0 306 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 RASGEF1CQ8N431 466 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 DQX1Q8TE96 717 aaKnown RBP10.74□□□□□ -0.69
MDC1-205ENST00000425072 COG1Q8WTW3 980 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 MRPS31Q92665 395 aaKnown RBP10.74□□□□□ -0.69
MDC1-205ENST00000425072 ALG3Q92685 438 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 KRT35Q92764 455 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 CASP10Q92851 521 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 NTAN1Q96AB6 310 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 HAPLN3Q96S86 360 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 PRKD2Q9BZL6 878 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 SMOC2Q9H3U7 446 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 MAN1C1Q9NR34 630 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 ASAH2Q9NR71 780 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 DZANK1Q9NVP4 752 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 MARCH2Q9P0N8 246 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 FEZ2Q9UHY8 353 aaPredicted RBP10.74□□□□□ -0.69
MDC1-205ENST00000425072 TLR6Q9Y2C9 796 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 HBS1LQ9Y450 684 aaKnown RBP10.74□□□□□ -0.69
MDC1-205ENST00000425072 MYO7AQ13402 2215 aa10.74□□□□□ -0.69
MDC1-205ENST00000425072 SYNJ2BP-COX16A0A087WUM0 186 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 CCDC195A0A1B0GUA6 201 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 CTAGE15A4D2H0 777 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 ZNF487B1APH4 448 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 CCDC188H7C350 402 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 PGRMC1O00264 195 aaKnown RBP10.73□□□□□ -0.69
MDC1-205ENST00000425072 FANCGO15287 622 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 TLR5O60602 858 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 SLU7O95391 586 aaKnown RBP10.73□□□□□ -0.69
MDC1-205ENST00000425072 IGLV3-25P01717 112 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 F11P03951 625 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 CTAGE8P0CG41 777 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 EPCAMP16422 314 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 ZFXP17010 805 aaPredicted RBP10.73□□□□□ -0.69
MDC1-205ENST00000425072 HDCP19113 662 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 DDX6P26196 483 aaKnown RBP eCLIP10.73□□□□□ -0.69
MDC1-205ENST00000425072 NRIP1P48552 1158 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 HCAR3P49019 387 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 TBX4P57082 545 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 ITIH3Q06033 890 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 RING1Q06587 406 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 EFEMP1Q12805 493 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 EIF4EBP2Q13542 120 aaPredicted RBP10.73□□□□□ -0.69
MDC1-205ENST00000425072 TRIP4Q15650 581 aaPredicted RBP10.73□□□□□ -0.69
MDC1-205ENST00000425072 ATP13A4Q4VNC1 1196 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 ARHGAP15Q53QZ3 475 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 TFDP3Q5H9I0 405 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 TMEM184AQ6ZMB5 413 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 SPRED2Q7Z698 418 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 CTAGE6Q86UF2 777 aa10.73□□□□□ -0.69
MDC1-205ENST00000425072 CTAGE4Q8IX94 777 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms