RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 PENKP01210 267 aaPredicted RBP18.62■□□□□ 0.57
GPC1-203ENST00000425056 CISD3P0C7P0 127 aa18.62■□□□□ 0.57
GPC1-203ENST00000425056 HOXD12P35452 270 aa18.62■□□□□ 0.57
GPC1-203ENST00000425056 WASP42768 502 aa18.62■□□□□ 0.57
GPC1-203ENST00000425056 COG7P83436 770 aa18.62■□□□□ 0.57
GPC1-203ENST00000425056 TRIM61Q5EBN2 209 aa18.62■□□□□ 0.57
GPC1-203ENST00000425056 DCAF17Q5H9S7 520 aaPredicted RBP18.62■□□□□ 0.57
GPC1-203ENST00000425056 SLC36A4Q6YBV0 504 aa18.62■□□□□ 0.57
GPC1-203ENST00000425056 ARHGAP18Q8N392 663 aa18.62■□□□□ 0.57
GPC1-203ENST00000425056 ANKRD52Q8NB46 1076 aa18.62■□□□□ 0.57
GPC1-203ENST00000425056 SPATA20Q8TB22 786 aa18.62■□□□□ 0.57
GPC1-203ENST00000425056 IPO4Q8TEX9 1081 aaKnown RBP18.62■□□□□ 0.57
GPC1-203ENST00000425056 TATDN2Q93075 761 aa18.62■□□□□ 0.57
GPC1-203ENST00000425056 BHMTQ93088 406 aa18.62■□□□□ 0.57
GPC1-203ENST00000425056 TMEM74BQ9NUR3 256 aa18.62■□□□□ 0.57
GPC1-203ENST00000425056 RASAL2Q9UJF2 1139 aa18.62■□□□□ 0.57
GPC1-203ENST00000425056 SLC27A6Q9Y2P4 619 aa18.62■□□□□ 0.57
GPC1-203ENST00000425056 ASCC3Q8N3C0 2202 aaKnown RBP18.61■□□□□ 0.57
GPC1-203ENST00000425056 GFRA2O00451 464 aa18.61■□□□□ 0.57
GPC1-203ENST00000425056 AP5Z1O43299 807 aa18.61■□□□□ 0.57
GPC1-203ENST00000425056 NDUFV2P19404 249 aa18.61■□□□□ 0.57
GPC1-203ENST00000425056 CHKAP35790 457 aa18.61■□□□□ 0.57
GPC1-203ENST00000425056 NOVA1P51513 510 aaKnown RBP18.61■□□□□ 0.57
GPC1-203ENST00000425056 FKBP3Q00688 224 aaKnown RBP18.61■□□□□ 0.57
GPC1-203ENST00000425056 EFEMP1Q12805 493 aa18.61■□□□□ 0.57
GPC1-203ENST00000425056 LMAN2Q12907 356 aa18.61■□□□□ 0.57
GPC1-203ENST00000425056 TCERG1LQ5VWI1 586 aa18.61■□□□□ 0.57
GPC1-203ENST00000425056 FYB2Q5VWT5 728 aa18.61■□□□□ 0.57
GPC1-203ENST00000425056 SDE2Q6IQ49 451 aa18.61■□□□□ 0.57
GPC1-203ENST00000425056 KIAA1211LQ6NV74 962 aa18.61■□□□□ 0.57
GPC1-203ENST00000425056 TSG101Q99816 390 aa18.61■□□□□ 0.57
GPC1-203ENST00000425056 NUSAP1Q9BXS6 441 aaKnown RBP18.61■□□□□ 0.57
GPC1-203ENST00000425056 DCLK3Q9C098 648 aa18.61■□□□□ 0.57
GPC1-203ENST00000425056 PLK2Q9NYY3 685 aa18.61■□□□□ 0.57
GPC1-203ENST00000425056 PILRBQ9UKJ0 227 aa18.61■□□□□ 0.57
GPC1-203ENST00000425056 ATXN2Q99700 1313 aaKnown RBP18.6■□□□□ 0.57
GPC1-203ENST00000425056 IGHV1OR15-9A0A0B4J2B8 117 aa18.6■□□□□ 0.57
GPC1-203ENST00000425056 ZNF217O75362 1048 aa18.6■□□□□ 0.57
GPC1-203ENST00000425056 CORO1AP31146 461 aaKnown RBP18.6■□□□□ 0.57
GPC1-203ENST00000425056 PMS1P54277 932 aaKnown RBP18.6■□□□□ 0.57
GPC1-203ENST00000425056 BCAT1P54687 386 aa18.6■□□□□ 0.57
GPC1-203ENST00000425056 SLC8A3P57103 927 aa18.6■□□□□ 0.57
GPC1-203ENST00000425056 YWHAGP61981 247 aaKnown RBP eCLIP18.6■□□□□ 0.57
GPC1-203ENST00000425056 RPL6Q02878 288 aaKnown RBP18.6■□□□□ 0.57
GPC1-203ENST00000425056 LRRC63Q05C16 580 aa18.6■□□□□ 0.57
GPC1-203ENST00000425056 CUL2Q13617 745 aa18.6■□□□□ 0.57
GPC1-203ENST00000425056 PM20D1Q6GTS8 502 aa18.6■□□□□ 0.57
GPC1-203ENST00000425056 SLC23A3Q6PIS1 610 aa18.6■□□□□ 0.57
GPC1-203ENST00000425056 BHLHA9Q7RTU4 235 aa18.6■□□□□ 0.57
GPC1-203ENST00000425056 ENGASEQ8NFI3 743 aa18.6■□□□□ 0.57
GPC1-203ENST00000425056 SLC35C1Q96A29 364 aa18.6■□□□□ 0.57
GPC1-203ENST00000425056 CACNA2D2Q9NY47 1150 aa18.6■□□□□ 0.57
GPC1-203ENST00000425056 MARCH2Q9P0N8 246 aa18.6■□□□□ 0.57
GPC1-203ENST00000425056 STRIP2Q9ULQ0 834 aa18.6■□□□□ 0.57
GPC1-203ENST00000425056 PCDH15Q96QU1 1955 aa18.6■□□□□ 0.57
GPC1-203ENST00000425056 USP24Q9UPU5 2620 aa18.6■□□□□ 0.57
GPC1-203ENST00000425056 XPO1O14980 1071 aaKnown RBP18.59■□□□□ 0.57
GPC1-203ENST00000425056 ZBTB24O43167 697 aaPredicted RBP18.59■□□□□ 0.57
GPC1-203ENST00000425056 ZBED1O96006 694 aa18.59■□□□□ 0.57
GPC1-203ENST00000425056 CSRP1P21291 193 aaKnown RBP18.59■□□□□ 0.57
GPC1-203ENST00000425056 ITPKAP23677 461 aa18.59■□□□□ 0.57
GPC1-203ENST00000425056 TKTL1P51854 596 aa18.59■□□□□ 0.57
GPC1-203ENST00000425056 MFAP3P55082 362 aa18.59■□□□□ 0.57
GPC1-203ENST00000425056 GOLGA7BQ2TAP0 167 aa18.59■□□□□ 0.57
GPC1-203ENST00000425056 SH3PXD2AQ5TCZ1 1133 aa18.59■□□□□ 0.57
GPC1-203ENST00000425056 ANKRD40Q6AI12 368 aa18.59■□□□□ 0.57
GPC1-203ENST00000425056 RSRC2Q7L4I2 434 aaKnown RBP18.59■□□□□ 0.57
GPC1-203ENST00000425056 FAM217AQ8IXS0 508 aa18.59■□□□□ 0.57
GPC1-203ENST00000425056 CPXM2Q8N436 756 aa18.59■□□□□ 0.57
GPC1-203ENST00000425056 GTPBP4Q9BZE4 634 aaKnown RBP18.59■□□□□ 0.57
GPC1-203ENST00000425056 ULBP1Q9BZM6 244 aa18.59■□□□□ 0.57
GPC1-203ENST00000425056 TSPAN16Q9UKR8 245 aa18.59■□□□□ 0.57
GPC1-203ENST00000425056 AGO1Q9UL18 857 aaKnown RBP18.59■□□□□ 0.57
GPC1-203ENST00000425056 RAD54BQ9Y620 910 aa18.59■□□□□ 0.57
GPC1-203ENST00000425056 CKAP5Q14008 2032 aa18.59■□□□□ 0.57
GPC1-203ENST00000425056 TRIM49BA6NDI0 452 aa18.58■□□□□ 0.56
GPC1-203ENST00000425056 TULP2O00295 520 aa18.58■□□□□ 0.56
GPC1-203ENST00000425056 GIPC1O14908 333 aa18.58■□□□□ 0.56
GPC1-203ENST00000425056 SMC2O95347 1197 aa18.58■□□□□ 0.56
GPC1-203ENST00000425056 HMBSP08397 361 aa18.58■□□□□ 0.56
GPC1-203ENST00000425056 ENGP17813 658 aa18.58■□□□□ 0.56
GPC1-203ENST00000425056 YWHAEP62258 255 aaKnown RBP18.58■□□□□ 0.56
GPC1-203ENST00000425056 PDE4CQ08493 712 aa18.58■□□□□ 0.56
GPC1-203ENST00000425056 BST2Q10589 180 aaKnown RBP18.58■□□□□ 0.56
GPC1-203ENST00000425056 ST3GAL2Q16842 350 aa18.58■□□□□ 0.56
GPC1-203ENST00000425056 SGO2Q562F6 1265 aa18.58■□□□□ 0.56
GPC1-203ENST00000425056 UBR7Q8N806 425 aa18.58■□□□□ 0.56
GPC1-203ENST00000425056 SMARCE1Q969G3 411 aa18.58■□□□□ 0.56
GPC1-203ENST00000425056 PLD4Q96BZ4 506 aa18.58■□□□□ 0.56
GPC1-203ENST00000425056 MRGPRX1Q96LB2 322 aa18.58■□□□□ 0.56
GPC1-203ENST00000425056 ARMCX3Q9UH62 379 aaPredicted RBP18.58■□□□□ 0.56
GPC1-203ENST00000425056 CEP295Q9C0D2 2601 aa18.58■□□□□ 0.56
GPC1-203ENST00000425056 ADAMTS9Q9P2N4 1935 aa18.57■□□□□ 0.56
GPC1-203ENST00000425056 FRYQ5TBA9 3013 aa18.57■□□□□ 0.56
GPC1-203ENST00000425056 SLC12A8A0AV02 714 aa18.57■□□□□ 0.56
GPC1-203ENST00000425056 GOLGA6L4A6NEF3 574 aa18.57■□□□□ 0.56
GPC1-203ENST00000425056 NPC1O15118 1278 aa18.57■□□□□ 0.56
GPC1-203ENST00000425056 CEACAM1P13688 526 aa18.57■□□□□ 0.56
GPC1-203ENST00000425056 TBXAS1P24557 533 aaPredicted RBP18.57■□□□□ 0.56
GPC1-203ENST00000425056 ZNF33AQ06730 810 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms