RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 RAB11FIP4Q86YS3 637 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 PHYKPLQ8IUZ5 450 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 SCN4BQ8IWT1 228 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 ZFPM1Q8IX07 1006 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 ULK2Q8IYT8 1036 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 C17orf53Q8N3J3 647 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-205ENST00000424674 TTC39CQ8N584 583 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 POMGNT2Q8NAT1 580 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 CCDC150Q8NCX0 1101 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 C3orf20Q8ND61 904 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 IL17RDQ8NFM7 739 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 KIAA1524Q8TCG1 905 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 CALML6Q8TD86 181 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 SHC3Q92529 594 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 RTF1Q92541 710 aaKnown RBP3.97□□□□□ -1.77
SF3B1-205ENST00000424674 USP6NLQ92738 828 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 KRT35Q92764 455 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 DLG3Q92796 817 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 FATE1Q969F0 183 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 PPP1R13BQ96KQ4 1090 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 NEK1Q96PY6 1258 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 TMEM237Q96Q45 408 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 P2RX7Q99572 595 aaKnown RBP3.97□□□□□ -1.77
SF3B1-205ENST00000424674 THUMPD3Q9BV44 507 aaKnown RBP3.97□□□□□ -1.77
SF3B1-205ENST00000424674 ZNF341Q9BYN7 854 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 MAGEB5Q9BZ81 275 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 TWSG1Q9GZX9 223 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 OR10A2Q9H208 303 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 MUC13Q9H3R2 512 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 MROH8Q9H579 483 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 THAP9Q9H5L6 903 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 MLXIPQ9HAP2 919 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 SARS2Q9NP81 518 aaKnown RBP3.97□□□□□ -1.77
SF3B1-205ENST00000424674 GJB4Q9NTQ9 266 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 ZNHIT6Q9NWK9 470 aaKnown RBP3.97□□□□□ -1.77
SF3B1-205ENST00000424674 TAS2R10Q9NYW0 307 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 NDUFAF4Q9P032 175 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 COL20A1Q9P218 1284 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 IGSF9Q9P2J2 1179 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 CPNE7Q9UBL6 633 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 DPP7Q9UHL4 492 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 CFAP45Q9UL16 551 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 CAMK2AQ9UQM7 478 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 CCL27Q9Y4X3 112 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 ASB1Q9Y576 335 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 B3GALT1Q9Y5Z6 326 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 FAM169AQ9Y6X4 670 aa3.97□□□□□ -1.77
SF3B1-205ENST00000424674 CLRN2A0PK11 232 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 ELL2O00472 640 aaPredicted RBP3.96□□□□□ -1.78
SF3B1-205ENST00000424674 FCHO1O14526 889 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 MCF2LO15068 1137 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 PGRMC2O15173 223 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 GJB3O75712 270 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 MT-ND5P03915 603 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 PRKCBP05771 671 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 LPLP06858 475 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 PDHA1P08559 390 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 CYP2A6P11509 494 aaPredicted RBP3.96□□□□□ -1.78
SF3B1-205ENST00000424674 NPR1P16066 1061 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 PTPN2P17706 415 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 HOXD10P28358 340 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 PBLDP30039 288 aaPredicted RBP3.96□□□□□ -1.78
SF3B1-205ENST00000424674 SDHAP31040 664 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 RFC1P35251 1148 aaPredicted RBP3.96□□□□□ -1.78
SF3B1-205ENST00000424674 PAFAH1B1P43034 410 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 IFNAR2P48551 515 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 LMAN1P49257 510 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 PRKAA2P54646 552 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 SLC26A5P58743 744 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 HTD2P86397 168 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 GALNT2Q10471 571 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 FOXE3Q13461 319 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 LASP1Q14847 261 aaKnown RBP3.96□□□□□ -1.78
SF3B1-205ENST00000424674 ACAP1Q15027 740 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 SEC23BQ15437 767 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 GEN1Q17RS7 908 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 SMU1Q2TAY7 513 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 NRN1LQ496H8 165 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 CEP55Q53EZ4 464 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 USP39Q53GS9 565 aaKnown RBP3.96□□□□□ -1.78
SF3B1-205ENST00000424674 BMP2KLQ5H9B9 411 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 MIIPQ5JXC2 388 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 PLEKHS1Q5SXH7 462 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 KRT80Q6KB66 452 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 SLC30A9Q6PML9 568 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 OLFM4Q6UX06 510 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 ATF7IPQ6VMQ6 1270 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 PIWIL3Q7Z3Z3 882 aaKnown RBP3.96□□□□□ -1.78
SF3B1-205ENST00000424674 ANKS1BQ7Z6G8 1248 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.96□□□□□ -1.78
SF3B1-205ENST00000424674 ADCK1Q86TW2 530 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 CCDC105Q8IYK2 499 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 ZBTB44Q8NCP5 570 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 ZNF384Q8TF68 577 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 TSPEARQ8WU66 669 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 ANKRD49Q8WVL7 239 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 CFHR4Q92496 578 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 KAT5Q92993 513 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 ITFG2Q969R8 447 aa3.96□□□□□ -1.78
SF3B1-205ENST00000424674 CFAP36Q96G28 342 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms