RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 MED10Q9BTT4 135 aa16.41■□□□□ 0.22
RPUSD3-204ENST00000424438 NUP58Q9BVL2 599 aa16.41■□□□□ 0.22
RPUSD3-204ENST00000424438 MKRN2Q9H000 416 aaKnown RBP16.41■□□□□ 0.22
RPUSD3-204ENST00000424438 GAREM1Q9H706 876 aa16.41■□□□□ 0.22
RPUSD3-204ENST00000424438 SMYD3Q9H7B4 428 aa16.41■□□□□ 0.22
RPUSD3-204ENST00000424438 CD93Q9NPY3 652 aa16.41■□□□□ 0.22
RPUSD3-204ENST00000424438 PCDHA5Q9Y5H7 936 aa16.41■□□□□ 0.22
RPUSD3-204ENST00000424438 IRF1P10914 325 aa16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 P4HA1P13674 534 aa16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 PLA2G2AP14555 144 aa16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 CHKAP35790 457 aa16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 ABCG1P45844 678 aa16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 TPMTP51580 245 aa16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 BNC1Q01954 994 aa16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 CAMK2BQ13554 666 aa16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 SUZ12Q15022 739 aaKnown RBP16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 E2F4Q16254 413 aa16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 ZNF699Q32M78 642 aa16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 TPGS1Q6ZTW0 290 aa16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 TADA2BQ86TJ2 420 aa16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 ZCCHC9Q8N567 271 aaKnown RBP16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 TAF4BQ92750 862 aa16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 CCDC127Q96BQ5 260 aa16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 CDK5RAP1Q96SZ6 601 aaKnown RBP16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 GPR174Q9BXC1 333 aa16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 DNMT3LQ9UJW3 386 aa16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 RAD54BQ9Y620 910 aa16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 KALRNO60229 2985 aa16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 COL5A1P20908 1838 aaPredicted RBP16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 PTPRQQ9UMZ3 2332 aa16.4■□□□□ 0.22
RPUSD3-204ENST00000424438 PAPSS1O43252 624 aaPredicted RBP16.39■□□□□ 0.21
RPUSD3-204ENST00000424438 MAOBP27338 520 aa16.39■□□□□ 0.21
RPUSD3-204ENST00000424438 PGFP49763 221 aa16.39■□□□□ 0.21
RPUSD3-204ENST00000424438 MFAP3P55082 362 aa16.39■□□□□ 0.21
RPUSD3-204ENST00000424438 CDH8P55286 799 aa16.39■□□□□ 0.21
RPUSD3-204ENST00000424438 PDE4CQ08493 712 aa16.39■□□□□ 0.21
RPUSD3-204ENST00000424438 ORC1Q13415 861 aa16.39■□□□□ 0.21
RPUSD3-204ENST00000424438 CUL4AQ13619 759 aa16.39■□□□□ 0.21
RPUSD3-204ENST00000424438 SMAD1Q15797 465 aaKnown RBP16.39■□□□□ 0.21
RPUSD3-204ENST00000424438 HLA-BQ31612 363 aa16.39■□□□□ 0.21
RPUSD3-204ENST00000424438 DCAF12L1Q5VU92 463 aa16.39■□□□□ 0.21
RPUSD3-204ENST00000424438 TMPRSS6Q8IU80 811 aa16.39■□□□□ 0.21
RPUSD3-204ENST00000424438 RDH13Q8NBN7 331 aa16.39■□□□□ 0.21
RPUSD3-204ENST00000424438 RBBP8NLQ8NC74 664 aaPredicted RBP16.39■□□□□ 0.21
RPUSD3-204ENST00000424438 PARD3BQ8TEW8 1205 aa16.39■□□□□ 0.21
RPUSD3-204ENST00000424438 SIPA1Q96FS4 1042 aa16.39■□□□□ 0.21
RPUSD3-204ENST00000424438 SLC2A11Q9BYW1 496 aa16.39■□□□□ 0.21
RPUSD3-204ENST00000424438 SLC6A17Q9H1V8 727 aa16.39■□□□□ 0.21
RPUSD3-204ENST00000424438 MAGEF1Q9HAY2 307 aa16.39■□□□□ 0.21
RPUSD3-204ENST00000424438 CLIC5Q9NZA1 410 aa16.39■□□□□ 0.21
RPUSD3-204ENST00000424438 FNDC3AQ9Y2H6 1198 aaKnown RBP16.39■□□□□ 0.21
RPUSD3-204ENST00000424438 NUMA1Q14980 2115 aa16.39■□□□□ 0.21
RPUSD3-204ENST00000424438 KCNJ18B7U540 433 aa16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 WASH3PC4AMC7 463 aa16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 HHLA1C9JL84 531 aa16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 TIMM44O43615 452 aa16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 PCDHGA12O60330 932 aa16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 PHACTR2O75167 634 aa16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 STC2O76061 302 aa16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 BEST1O76090 585 aa16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 TBX18O95935 607 aa16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 RPN1P04843 607 aaKnown RBP16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 TRIM21P19474 475 aaKnown RBP16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 CYP2J2P51589 502 aa16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 AFF3P51826 1226 aaKnown RBP16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 NCOA4Q13772 614 aa16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 PTPRNQ16849 979 aa16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 FYB2Q5VWT5 728 aa16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 ACOT1Q86TX2 421 aa16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 PDCD7Q8N8D1 485 aaKnown RBP16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 ENGASEQ8NFI3 743 aa16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 GOLGA5Q8TBA6 731 aa16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 SLC2A14Q8TDB8 520 aa16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 SETD7Q8WTS6 366 aaKnown RBP16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 PRCCQ92733 491 aaPredicted RBP16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 PIWIL1Q96J94 861 aaKnown RBP16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 HNRNPABQ99729 332 aaKnown RBP16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 DCLK3Q9C098 648 aa16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 SDCBP2Q9H190 292 aa16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 FBRSQ9HAH7 460 aa16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 OSER1Q9NX31 292 aa16.38■□□□□ 0.21
RPUSD3-204ENST00000424438 SHROOM3Q8TF72 1996 aa16.37■□□□□ 0.21
RPUSD3-204ENST00000424438 VPS37CA5D8V6 355 aaPredicted RBP16.37■□□□□ 0.21
RPUSD3-204ENST00000424438 ATXN7O15265 892 aaPredicted RBP16.37■□□□□ 0.21
RPUSD3-204ENST00000424438 TNFSF14O43557 240 aa16.37■□□□□ 0.21
RPUSD3-204ENST00000424438 SYNCRIPO60506 623 aaKnown RBP16.37■□□□□ 0.21
RPUSD3-204ENST00000424438 C4BPAP04003 597 aaKnown RBP16.37■□□□□ 0.21
RPUSD3-204ENST00000424438 FAM200BP0CF97 657 aa16.37■□□□□ 0.21
RPUSD3-204ENST00000424438 IL12RB1P42701 662 aa16.37■□□□□ 0.21
RPUSD3-204ENST00000424438 GRIA4P48058 902 aa16.37■□□□□ 0.21
RPUSD3-204ENST00000424438 NASPP49321 788 aaPredicted RBP16.37■□□□□ 0.21
RPUSD3-204ENST00000424438 COPAP53621 1224 aa16.37■□□□□ 0.21
RPUSD3-204ENST00000424438 COG7P83436 770 aa16.37■□□□□ 0.21
RPUSD3-204ENST00000424438 CYP4F3Q08477 520 aa16.37■□□□□ 0.21
RPUSD3-204ENST00000424438 SGSM1Q2NKQ1 1148 aa16.37■□□□□ 0.21
RPUSD3-204ENST00000424438 CLEC20AQ6ZU45 233 aa16.37■□□□□ 0.21
RPUSD3-204ENST00000424438 UNC13DQ70J99 1090 aa16.37■□□□□ 0.21
RPUSD3-204ENST00000424438 CCDC186Q7Z3E2 898 aa16.37■□□□□ 0.21
RPUSD3-204ENST00000424438 ANKS1BQ7Z6G8 1248 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms