RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 CYTH4Q9UIA0 394 aa19.53■□□□□ 0.72
PRNP-202ENST00000424424 KIAA1549LQ6ZVL6 1849 aa19.53■□□□□ 0.72
PRNP-202ENST00000424424 F8VZ95 297 aa19.52■□□□□ 0.72
PRNP-202ENST00000424424 CAPN9O14815 690 aa19.52■□□□□ 0.72
PRNP-202ENST00000424424 RNF40O75150 1001 aa19.52■□□□□ 0.72
PRNP-202ENST00000424424 APODP05090 189 aa19.52■□□□□ 0.72
PRNP-202ENST00000424424 ATP1A3P13637 1013 aa19.52■□□□□ 0.72
PRNP-202ENST00000424424 CYP11B1P15538 503 aa19.52■□□□□ 0.72
PRNP-202ENST00000424424 NBL1P41271 181 aa19.52■□□□□ 0.72
PRNP-202ENST00000424424 KLK7P49862 253 aa19.52■□□□□ 0.72
PRNP-202ENST00000424424 NRLP54845 237 aa19.52■□□□□ 0.72
PRNP-202ENST00000424424 TPM4P67936 248 aa19.52■□□□□ 0.72
PRNP-202ENST00000424424 NAIF1Q69YI7 327 aaPredicted RBP19.52■□□□□ 0.72
PRNP-202ENST00000424424 MSANTD2Q6P1R3 559 aa19.52■□□□□ 0.72
PRNP-202ENST00000424424 TPGS1Q6ZTW0 290 aa19.52■□□□□ 0.72
PRNP-202ENST00000424424 DENND1CQ8IV53 801 aa19.52■□□□□ 0.72
PRNP-202ENST00000424424 TMEM35BQ8NCS4 154 aa19.52■□□□□ 0.72
PRNP-202ENST00000424424 ERGIC2Q96RQ1 377 aa19.52■□□□□ 0.72
PRNP-202ENST00000424424 BBS2Q9BXC9 721 aa19.52■□□□□ 0.72
PRNP-202ENST00000424424 FAM126AQ9BYI3 521 aaPredicted RBP19.52■□□□□ 0.72
PRNP-202ENST00000424424 NLRC4Q9NPP4 1024 aa19.52■□□□□ 0.72
PRNP-202ENST00000424424 DEC1Q9P2X7 70 aa19.52■□□□□ 0.72
PRNP-202ENST00000424424 SIK3Q9Y2K2 1263 aa19.52■□□□□ 0.72
PRNP-202ENST00000424424 FANCMQ8IYD8 2048 aa19.51■□□□□ 0.71
PRNP-202ENST00000424424 KLKB1P03952 638 aa19.51■□□□□ 0.71
PRNP-202ENST00000424424 SLC6A11P48066 632 aa19.51■□□□□ 0.71
PRNP-202ENST00000424424 TRIP4Q15650 581 aaPredicted RBP19.51■□□□□ 0.71
PRNP-202ENST00000424424 BEND5Q7L4P6 421 aa19.51■□□□□ 0.71
PRNP-202ENST00000424424 WDTC1Q8N5D0 677 aa19.51■□□□□ 0.71
PRNP-202ENST00000424424 NAT16Q8N8M0 369 aa19.51■□□□□ 0.71
PRNP-202ENST00000424424 IPO4Q8TEX9 1081 aaKnown RBP19.51■□□□□ 0.71
PRNP-202ENST00000424424 SYNCQ9H7C4 482 aa19.51■□□□□ 0.71
PRNP-202ENST00000424424 ARHGEF4Q9NR80 690 aa19.51■□□□□ 0.71
PRNP-202ENST00000424424 AGO1Q9UL18 857 aaKnown RBP19.51■□□□□ 0.71
PRNP-202ENST00000424424 CHURC1-FNTBB4DL54 471 aa19.5■□□□□ 0.71
PRNP-202ENST00000424424 NEDD8-MDP1E9PL57 170 aa19.5■□□□□ 0.71
PRNP-202ENST00000424424 PAPSS1O43252 624 aaPredicted RBP19.5■□□□□ 0.71
PRNP-202ENST00000424424 GFPT2O94808 682 aa19.5■□□□□ 0.71
PRNP-202ENST00000424424 KAT7O95251 611 aa19.5■□□□□ 0.71
PRNP-202ENST00000424424 CAVIN2O95810 425 aa19.5■□□□□ 0.71
PRNP-202ENST00000424424 CYBBP04839 570 aa19.5■□□□□ 0.71
PRNP-202ENST00000424424 TYRP14679 529 aa19.5■□□□□ 0.71
PRNP-202ENST00000424424 SOX5P35711 763 aa19.5■□□□□ 0.71
PRNP-202ENST00000424424 STAT1P42224 750 aa19.5■□□□□ 0.71
PRNP-202ENST00000424424 GRIA2P42262 883 aa19.5■□□□□ 0.71
PRNP-202ENST00000424424 YWHAZP63104 245 aaKnown RBP19.5■□□□□ 0.71
PRNP-202ENST00000424424 SATB1Q01826 763 aa19.5■□□□□ 0.71
PRNP-202ENST00000424424 EFHC1Q5JVL4 640 aa19.5■□□□□ 0.71
PRNP-202ENST00000424424 TSSK4Q6SA08 328 aa19.5■□□□□ 0.71
PRNP-202ENST00000424424 APTXQ7Z2E3 356 aaKnown RBP19.5■□□□□ 0.71
PRNP-202ENST00000424424 ZNF677Q86XU0 584 aa19.5■□□□□ 0.71
PRNP-202ENST00000424424 UNC45BQ8IWX7 931 aa19.5■□□□□ 0.71
PRNP-202ENST00000424424 C1orf131Q8NDD1 294 aaKnown RBP19.5■□□□□ 0.71
PRNP-202ENST00000424424 ATRIPQ8WXE1 791 aa19.5■□□□□ 0.71
PRNP-202ENST00000424424 CPXM1Q96SM3 734 aa19.5■□□□□ 0.71
PRNP-202ENST00000424424 SEMA4AQ9H3S1 761 aa19.5■□□□□ 0.71
PRNP-202ENST00000424424 POPDC2Q9HBU9 364 aa19.5■□□□□ 0.71
PRNP-202ENST00000424424 ZSCAN32Q9NX65 697 aa19.5■□□□□ 0.71
PRNP-202ENST00000424424 MARK1Q9P0L2 795 aa19.5■□□□□ 0.71
PRNP-202ENST00000424424 PROB1E7EW31 1015 aa19.49■□□□□ 0.71
PRNP-202ENST00000424424 TULP3O75386 442 aa19.49■□□□□ 0.71
PRNP-202ENST00000424424 PAPSS2O95340 614 aaPredicted RBP19.49■□□□□ 0.71
PRNP-202ENST00000424424 GLI1P08151 1106 aa19.49■□□□□ 0.71
PRNP-202ENST00000424424 KDSRQ06136 332 aa19.49■□□□□ 0.71
PRNP-202ENST00000424424 IQCB1Q15051 598 aa19.49■□□□□ 0.71
PRNP-202ENST00000424424 TAF3Q5VWG9 929 aa19.49■□□□□ 0.71
PRNP-202ENST00000424424 NUGGCQ68CJ6 796 aa19.49■□□□□ 0.71
PRNP-202ENST00000424424 TOGARAM2Q6ZUX3 1019 aa19.49■□□□□ 0.71
PRNP-202ENST00000424424 CACNA2D4Q7Z3S7 1137 aa19.49■□□□□ 0.71
PRNP-202ENST00000424424 C12orf40Q86WS4 652 aa19.49■□□□□ 0.71
PRNP-202ENST00000424424 ETFBKMTQ8IXQ9 262 aa19.49■□□□□ 0.71
PRNP-202ENST00000424424 CPXM2Q8N436 756 aa19.49■□□□□ 0.71
PRNP-202ENST00000424424 MSANTD4Q8NCY6 345 aa19.49■□□□□ 0.71
PRNP-202ENST00000424424 RPLP0P6Q8NHW5 317 aa19.49■□□□□ 0.71
PRNP-202ENST00000424424 ACDQ96AP0 544 aa19.49■□□□□ 0.71
PRNP-202ENST00000424424 SERPINB11Q96P15 392 aa19.49■□□□□ 0.71
PRNP-202ENST00000424424 PHOX2BQ99453 314 aa19.49■□□□□ 0.71
PRNP-202ENST00000424424 SLC8A2Q9UPR5 921 aa19.49■□□□□ 0.71
PRNP-202ENST00000424424 NAALADL1Q9UQQ1 740 aa19.49■□□□□ 0.71
PRNP-202ENST00000424424 PCDHGA2Q9Y5H1 932 aa19.49■□□□□ 0.71
PRNP-202ENST00000424424 A0A0A0MRY4 1105 aa19.48■□□□□ 0.71
PRNP-202ENST00000424424 TBC1D3BA6NDS4 549 aa19.48■□□□□ 0.71
PRNP-202ENST00000424424 K7EQS6 105 aa19.48■□□□□ 0.71
PRNP-202ENST00000424424 MSI1O43347 362 aaKnown RBP19.48■□□□□ 0.71
PRNP-202ENST00000424424 CACNG3O60359 315 aa19.48■□□□□ 0.71
PRNP-202ENST00000424424 LATS1O95835 1130 aa19.48■□□□□ 0.71
PRNP-202ENST00000424424 TNFRSF4P43489 277 aa19.48■□□□□ 0.71
PRNP-202ENST00000424424 TBX4P57082 545 aa19.48■□□□□ 0.71
PRNP-202ENST00000424424 JAM2P57087 298 aa19.48■□□□□ 0.71
PRNP-202ENST00000424424 ZNF445P59923 1031 aa19.48■□□□□ 0.71
PRNP-202ENST00000424424 RING1Q06587 406 aa19.48■□□□□ 0.71
PRNP-202ENST00000424424 ZSCAN23Q3MJ62 389 aa19.48■□□□□ 0.71
PRNP-202ENST00000424424 GRAMD4Q6IC98 578 aa19.48■□□□□ 0.71
PRNP-202ENST00000424424 OR6B2Q6IFH4 312 aa19.48■□□□□ 0.71
PRNP-202ENST00000424424 ZDHHC17Q8IUH5 632 aa19.48■□□□□ 0.71
PRNP-202ENST00000424424 EPS8L1Q8TE68 723 aa19.48■□□□□ 0.71
PRNP-202ENST00000424424 EZH1Q92800 747 aaPredicted RBP19.48■□□□□ 0.71
PRNP-202ENST00000424424 NKD2Q969F2 451 aaPredicted RBP19.48■□□□□ 0.71
PRNP-202ENST00000424424 RTN4Q9NQC3 1192 aaKnown RBP19.48■□□□□ 0.71
PRNP-202ENST00000424424 DNAJC17Q9NVM6 304 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms