RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 WBP2Q969T9 261 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 CCDC42Q96M95 316 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 SLC2A13Q96QE2 648 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 TRMT61BQ9BVS5 477 aaKnown RBP9.69□□□□□ -0.86
PDGFC-202ENST00000422544 DEF6Q9H4E7 631 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 NHEJ1Q9H9Q4 299 aaPredicted RBP9.69□□□□□ -0.86
PDGFC-202ENST00000422544 KIF9Q9HAQ2 790 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 OLA1Q9NTK5 396 aaKnown RBP9.69□□□□□ -0.86
PDGFC-202ENST00000422544 ASNSD1Q9NWL6 643 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 OBP2AQ9NY56 170 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 CFAP97Q9P2B7 532 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 IMPACTQ9P2X3 320 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 STRIP2Q9ULQ0 834 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 NCOR2Q9Y618 2525 aa9.69□□□□□ -0.86
PDGFC-202ENST00000422544 EP300Q09472 2414 aaPredicted RBP9.68□□□□□ -0.86
PDGFC-202ENST00000422544 SSU72P8A0A1W2PR75 194 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 ZNF263O14978 683 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 MSI1O43347 362 aaKnown RBP9.68□□□□□ -0.86
PDGFC-202ENST00000422544 DCXO43602 365 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 AKR1B10O60218 316 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 CALB1P05937 261 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 RRM1P23921 792 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 GDI1P31150 447 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 SCNN1AP37088 669 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 PITX1P78337 314 aaPredicted RBP9.68□□□□□ -0.86
PDGFC-202ENST00000422544 COG7P83436 770 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 CDK17Q00537 523 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 FCHO2Q0JRZ9 810 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 USP4Q13107 963 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 MTF1Q14872 753 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 ZNF77Q15935 545 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 CCDC122Q5T0U0 273 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 PPP1R2P3Q6NXS1 205 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 CC2D1AQ6P1N0 951 aaPredicted RBP9.68□□□□□ -0.86
PDGFC-202ENST00000422544 MSANTD2Q6P1R3 559 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 ALKBH5Q6P6C2 394 aaKnown RBP9.68□□□□□ -0.86
PDGFC-202ENST00000422544 BEND5Q7L4P6 421 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 DQX1Q8TE96 717 aaKnown RBP9.68□□□□□ -0.86
PDGFC-202ENST00000422544 DEPDC1BQ8WUY9 529 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 VCPIP1Q96JH7 1222 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 ZFYVE19Q96K21 471 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 PANX2Q96RD6 677 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 TRIM62Q9BVG3 475 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 ISCUQ9H1K1 167 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 LINC00597Q9H2U6 94 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 METTL5Q9NRN9 209 aaKnown RBP9.68□□□□□ -0.86
PDGFC-202ENST00000422544 THG1LQ9NWX6 298 aaKnown RBP9.68□□□□□ -0.86
PDGFC-202ENST00000422544 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.68□□□□□ -0.86
PDGFC-202ENST00000422544 WDR35Q9P2L0 1181 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 TMEM59LQ9UK28 342 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 SORCS3Q9UPU3 1222 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 SH3BP1Q9Y3L3 701 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 WNT6Q9Y6F9 365 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 CEP250Q9BV73 2442 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 DENND4AQ7Z401 1863 aa9.68□□□□□ -0.86
PDGFC-202ENST00000422544 TPRP12270 2363 aaKnown RBP9.67□□□□□ -0.86
PDGFC-202ENST00000422544 CHD6Q8TD26 2715 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 TCRBV5S1A1TA0A578 114 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 ATMINO43313 823 aaPredicted RBP9.67□□□□□ -0.86
PDGFC-202ENST00000422544 DAB1O75553 588 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 STC2O76061 302 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 TRUB2O95900 331 aaKnown RBP9.67□□□□□ -0.86
PDGFC-202ENST00000422544 SRFP11831 508 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 KRT3P12035 628 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 TCF3P15923 654 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 ABCB4P21439 1286 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 NOS2P35228 1153 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 FLT3P36888 993 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 MATKP42679 507 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 GSE1Q14687 1217 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 SLC18A3Q16572 532 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 TRIM68Q6AZZ1 485 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 TRNP1Q6NT89 227 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 DNAJC24Q6P3W2 148 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 TAC4Q86UU9 113 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 DDX42Q86XP3 938 aaKnown RBP eCLIP9.67□□□□□ -0.86
PDGFC-202ENST00000422544 EMC1Q8N766 993 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 C3orf20Q8ND61 904 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 JOSD2Q8TAC2 188 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 RXFP2Q8WXD0 754 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 ASIC4Q96FT7 647 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 SELENOOQ9BVL4 669 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 BRD9Q9H8M2 597 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 SPTLC3Q9NUV7 552 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 DUS2Q9NX74 493 aaKnown RBP9.67□□□□□ -0.86
PDGFC-202ENST00000422544 NENFQ9UMX5 172 aa9.67□□□□□ -0.86
PDGFC-202ENST00000422544 HBS1LQ9Y450 684 aaKnown RBP9.67□□□□□ -0.86
PDGFC-202ENST00000422544 ZNF638Q14966 1978 aaKnown RBP9.66□□□□□ -0.86
PDGFC-202ENST00000422544 PATJQ8NI35 1801 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 SYNJ2BP-COX16A0A087WUM0 186 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 E2F8A0AVK6 867 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 C2CD4BA6NLJ0 364 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 SIGLEC16A6NMB1 481 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 GOLGA6L6A8MZA4 724 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 M0QYT0 321 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 CHADO15335 359 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 GREM1O60565 184 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 IGLV3-25P01717 112 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 KLKB1P03952 638 aa9.66□□□□□ -0.86
PDGFC-202ENST00000422544 MYBL1P10243 752 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms