RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 MYL4P12829 197 aa4.74□□□□□ -1.65
LINC00397-201ENST00000422074 PRF1P14222 555 aa4.74□□□□□ -1.65
LINC00397-201ENST00000422074 TRIM27P14373 513 aa4.74□□□□□ -1.65
LINC00397-201ENST00000422074 MST1P26927 711 aa4.74□□□□□ -1.65
LINC00397-201ENST00000422074 DUSP1P28562 367 aa4.74□□□□□ -1.65
LINC00397-201ENST00000422074 GALNSP34059 522 aa4.74□□□□□ -1.65
LINC00397-201ENST00000422074 PBX1P40424 430 aa4.74□□□□□ -1.65
LINC00397-201ENST00000422074 FOXG1P55316 489 aaPredicted RBP4.74□□□□□ -1.65
LINC00397-201ENST00000422074 RPS13P62277 151 aaKnown RBP4.74□□□□□ -1.65
LINC00397-201ENST00000422074 RBMS2Q15434 407 aaKnown RBP4.74□□□□□ -1.65
LINC00397-201ENST00000422074 FAM110CQ1W6H9 321 aa4.74□□□□□ -1.65
LINC00397-201ENST00000422074 FAXCQ5TGI0 409 aa4.74□□□□□ -1.65
LINC00397-201ENST00000422074 AWAT2Q6E213 333 aa4.74□□□□□ -1.65
LINC00397-201ENST00000422074 MRNIPQ6NTE8 343 aa4.74□□□□□ -1.65
LINC00397-201ENST00000422074 TLDC1Q6P9B6 456 aa4.74□□□□□ -1.65
LINC00397-201ENST00000422074 SHC4Q6S5L8 630 aa4.74□□□□□ -1.65
LINC00397-201ENST00000422074 BEND5Q7L4P6 421 aa4.74□□□□□ -1.65
LINC00397-201ENST00000422074 ADGRE3Q9BY15 652 aa4.74□□□□□ -1.65
LINC00397-201ENST00000422074 RNF26Q9BY78 433 aaPredicted RBP4.74□□□□□ -1.65
LINC00397-201ENST00000422074 MAGEB5Q9BZ81 275 aa4.74□□□□□ -1.65
LINC00397-201ENST00000422074 AGO4Q9HCK5 861 aaKnown RBP4.74□□□□□ -1.65
LINC00397-201ENST00000422074 TMOD4Q9NZQ9 345 aa4.74□□□□□ -1.65
LINC00397-201ENST00000422074 POM121BA6NF01 834 aa4.73□□□□□ -1.65
LINC00397-201ENST00000422074 C16orf96A6NNT2 1141 aa4.73□□□□□ -1.65
LINC00397-201ENST00000422074 KRTAP29-1A8MX34 341 aaPredicted RBP4.73□□□□□ -1.65
LINC00397-201ENST00000422074 KIF3BO15066 747 aa4.73□□□□□ -1.65
LINC00397-201ENST00000422074 COQ9O75208 318 aa4.73□□□□□ -1.65
LINC00397-201ENST00000422074 GABRB3P28472 473 aa4.73□□□□□ -1.65
LINC00397-201ENST00000422074 TACR3P29371 465 aa4.73□□□□□ -1.65
LINC00397-201ENST00000422074 PRIM2P49643 509 aa4.73□□□□□ -1.65
LINC00397-201ENST00000422074 PLCD1P51178 756 aa4.73□□□□□ -1.65
LINC00397-201ENST00000422074 JAK3P52333 1124 aa4.73□□□□□ -1.65
LINC00397-201ENST00000422074 WDR5P61964 334 aaKnown RBP4.73□□□□□ -1.65
LINC00397-201ENST00000422074 ID2Q02363 134 aa4.73□□□□□ -1.65
LINC00397-201ENST00000422074 PFKFB3Q16875 520 aaPredicted RBP4.73□□□□□ -1.65
LINC00397-201ENST00000422074 EARS2Q5JPH6 523 aaKnown RBP4.73□□□□□ -1.65
LINC00397-201ENST00000422074 CC2D1BQ5T0F9 858 aaKnown RBP4.73□□□□□ -1.65
LINC00397-201ENST00000422074 KLHDC7AQ5VTJ3 777 aa4.73□□□□□ -1.65
LINC00397-201ENST00000422074 RRAGBQ5VZM2 374 aa4.73□□□□□ -1.65
LINC00397-201ENST00000422074 CRTC1Q6UUV9 634 aa4.73□□□□□ -1.65
LINC00397-201ENST00000422074 CLASRPQ8N2M8 674 aaKnown RBP4.73□□□□□ -1.65
LINC00397-201ENST00000422074 NRACQ8N912 160 aa4.73□□□□□ -1.65
LINC00397-201ENST00000422074 OVCA2Q8WZ82 227 aa4.73□□□□□ -1.65
LINC00397-201ENST00000422074 EIF2AQ9BY44 585 aaKnown RBP4.73□□□□□ -1.65
LINC00397-201ENST00000422074 NUAK2Q9H093 628 aa4.73□□□□□ -1.65
LINC00397-201ENST00000422074 CHPF2Q9P2E5 772 aa4.73□□□□□ -1.65
LINC00397-201ENST00000422074 ADAM10O14672 748 aa4.72□□□□□ -1.65
LINC00397-201ENST00000422074 RRHO14718 337 aa4.72□□□□□ -1.65
LINC00397-201ENST00000422074 KPNA5O15131 536 aa4.72□□□□□ -1.65
LINC00397-201ENST00000422074 CCNT2O60583 730 aaKnown RBP4.72□□□□□ -1.65
LINC00397-201ENST00000422074 NTN1O95631 604 aa4.72□□□□□ -1.65
LINC00397-201ENST00000422074 YPEL5P62699 121 aa4.72□□□□□ -1.65
LINC00397-201ENST00000422074 ZNF91Q05481 1191 aa4.72□□□□□ -1.65
LINC00397-201ENST00000422074 GPS1Q13098 491 aa4.72□□□□□ -1.65
LINC00397-201ENST00000422074 ATP1A4Q13733 1029 aa4.72□□□□□ -1.65
LINC00397-201ENST00000422074 SAFBQ15424 915 aaKnown RBP eCLIP4.72□□□□□ -1.65
LINC00397-201ENST00000422074 SLC5A9Q2M3M2 681 aa4.72□□□□□ -1.65
LINC00397-201ENST00000422074 TRIM71Q2Q1W2 868 aaKnown RBP4.72□□□□□ -1.65
LINC00397-201ENST00000422074 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.72□□□□□ -1.65
LINC00397-201ENST00000422074 C11orf96Q7Z7L8 435 aa4.72□□□□□ -1.65
LINC00397-201ENST00000422074 CCDC28AQ8IWP9 274 aa4.72□□□□□ -1.65
LINC00397-201ENST00000422074 C16orf71Q8IYS4 520 aaPredicted RBP4.72□□□□□ -1.65
LINC00397-201ENST00000422074 ZFYVE19Q96K21 471 aa4.72□□□□□ -1.65
LINC00397-201ENST00000422074 TM2D2Q9BX73 214 aa4.72□□□□□ -1.65
LINC00397-201ENST00000422074 NAA15Q9BXJ9 866 aaKnown RBP4.72□□□□□ -1.65
LINC00397-201ENST00000422074 MLXIPLQ9NP71 852 aa4.72□□□□□ -1.65
LINC00397-201ENST00000422074 STARD7Q9NQZ5 370 aa4.72□□□□□ -1.65
LINC00397-201ENST00000422074 ABHD10Q9NUJ1 306 aa4.72□□□□□ -1.65
LINC00397-201ENST00000422074 TMEM184CQ9NVA4 438 aa4.72□□□□□ -1.65
LINC00397-201ENST00000422074 SIRT4Q9Y6E7 314 aaPredicted RBP4.72□□□□□ -1.65
LINC00397-201ENST00000422074 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.71□□□□□ -1.66
LINC00397-201ENST00000422074 PPM1GO15355 546 aaPredicted RBP4.71□□□□□ -1.66
LINC00397-201ENST00000422074 DHHO43323 396 aa4.71□□□□□ -1.66
LINC00397-201ENST00000422074 PLAUP00749 431 aa4.71□□□□□ -1.66
LINC00397-201ENST00000422074 EGR1P18146 543 aa4.71□□□□□ -1.66
LINC00397-201ENST00000422074 MMP8P22894 467 aa4.71□□□□□ -1.66
LINC00397-201ENST00000422074 STT3AP46977 705 aa4.71□□□□□ -1.66
LINC00397-201ENST00000422074 CCT4P50991 539 aaKnown RBP4.71□□□□□ -1.66
LINC00397-201ENST00000422074 RAE1P78406 368 aaKnown RBP4.71□□□□□ -1.66
LINC00397-201ENST00000422074 COBLL1Q53SF7 1204 aa4.71□□□□□ -1.66
LINC00397-201ENST00000422074 IRF2BP2Q7Z5L9 587 aa4.71□□□□□ -1.66
LINC00397-201ENST00000422074 TECPR1Q7Z6L1 1165 aa4.71□□□□□ -1.66
LINC00397-201ENST00000422074 TFAP2DQ7Z6R9 452 aa4.71□□□□□ -1.66
LINC00397-201ENST00000422074 MPLKIPQ8TAP9 179 aa4.71□□□□□ -1.66
LINC00397-201ENST00000422074 BRI3BPQ8WY22 251 aa4.71□□□□□ -1.66
LINC00397-201ENST00000422074 SNX27Q96L92 541 aa4.71□□□□□ -1.66
LINC00397-201ENST00000422074 NUDT22Q9BRQ3 303 aa4.71□□□□□ -1.66
LINC00397-201ENST00000422074 ZMYND8Q9ULU4 1186 aaPredicted RBP4.71□□□□□ -1.66
LINC00397-201ENST00000422074 SPATA31A5Q5VU36 1347 aa4.71□□□□□ -1.66
LINC00397-201ENST00000422074 SPATA31A7Q8IWB4 1347 aa4.71□□□□□ -1.66
LINC00397-201ENST00000422074 APAF1O14727 1248 aa4.7□□□□□ -1.66
LINC00397-201ENST00000422074 APOL1O14791 398 aa4.7□□□□□ -1.66
LINC00397-201ENST00000422074 INPPL1O15357 1258 aa4.7□□□□□ -1.66
LINC00397-201ENST00000422074 MATN1P21941 496 aa4.7□□□□□ -1.66
LINC00397-201ENST00000422074 HOXD12P35452 270 aa4.7□□□□□ -1.66
LINC00397-201ENST00000422074 IDUAP35475 653 aa4.7□□□□□ -1.66
LINC00397-201ENST00000422074 TM4SF4P48230 202 aa4.7□□□□□ -1.66
LINC00397-201ENST00000422074 IFIT5Q13325 482 aaKnown RBP4.7□□□□□ -1.66
LINC00397-201ENST00000422074 KPNB1Q14974 876 aaKnown RBP4.7□□□□□ -1.66
LINC00397-201ENST00000422074 LEXMQ3ZCV2 418 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms