RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 TPGS1Q6ZTW0 290 aa27.59■■■□□ 2.01
CDK9-202ENST00000421939 TMEM110Q86TL2 294 aa27.59■■■□□ 2.01
CDK9-202ENST00000421939 ALYREFQ86V81 257 aaKnown RBP27.59■■■□□ 2.01
CDK9-202ENST00000421939 CCDC26Q8TAB7 109 aa27.59■■■□□ 2.01
CDK9-202ENST00000421939 FAM149B1Q96BN6 582 aa27.59■■■□□ 2.01
CDK9-202ENST00000421939 BBS2Q9BXC9 721 aa27.59■■■□□ 2.01
CDK9-202ENST00000421939 STK33Q9BYT3 514 aa27.59■■■□□ 2.01
CDK9-202ENST00000421939 LHX5Q9H2C1 402 aa27.59■■■□□ 2.01
CDK9-202ENST00000421939 ARHGEF4Q9NR80 690 aa27.59■■■□□ 2.01
CDK9-202ENST00000421939 FAM207AQ9NSI2 230 aaPredicted RBP27.59■■■□□ 2.01
CDK9-202ENST00000421939 AGO1Q9UL18 857 aaKnown RBP27.59■■■□□ 2.01
CDK9-202ENST00000421939 SIK3Q9Y2K2 1263 aa27.59■■■□□ 2.01
CDK9-202ENST00000421939 NEDD8-MDP1E9PL57 170 aa27.58■■■□□ 2.01
CDK9-202ENST00000421939 PAPSS1O43252 624 aaPredicted RBP27.58■■■□□ 2.01
CDK9-202ENST00000421939 TULP3O75386 442 aa27.58■■■□□ 2.01
CDK9-202ENST00000421939 KAT7O95251 611 aa27.58■■■□□ 2.01
CDK9-202ENST00000421939 APODP05090 189 aa27.58■■■□□ 2.01
CDK9-202ENST00000421939 MESP2Q0VG99 397 aa27.58■■■□□ 2.01
CDK9-202ENST00000421939 TRIP4Q15650 581 aaPredicted RBP27.58■■■□□ 2.01
CDK9-202ENST00000421939 APTXQ7Z2E3 356 aaKnown RBP27.58■■■□□ 2.01
CDK9-202ENST00000421939 NAT16Q8N8M0 369 aa27.58■■■□□ 2.01
CDK9-202ENST00000421939 RPLP0P6Q8NHW5 317 aa27.58■■■□□ 2.01
CDK9-202ENST00000421939 NKD2Q969F2 451 aaPredicted RBP27.58■■■□□ 2.01
CDK9-202ENST00000421939 NOX5Q96PH1 765 aa27.58■■■□□ 2.01
CDK9-202ENST00000421939 FUCA2Q9BTY2 467 aa27.58■■■□□ 2.01
CDK9-202ENST00000421939 WDR35Q9P2L0 1181 aa27.58■■■□□ 2.01
CDK9-202ENST00000421939 CEP83Q9Y592 693 aa27.58■■■□□ 2.01
CDK9-202ENST00000421939 LRRC10BA6NIK2 292 aa27.57■■■□□ 2
CDK9-202ENST00000421939 K7EQS6 105 aa27.57■■■□□ 2
CDK9-202ENST00000421939 K7ESF4 209 aa27.57■■■□□ 2
CDK9-202ENST00000421939 MSI1O43347 362 aaKnown RBP27.57■■■□□ 2
CDK9-202ENST00000421939 ATP1A3P13637 1013 aa27.57■■■□□ 2
CDK9-202ENST00000421939 TYRP14679 529 aa27.57■■■□□ 2
CDK9-202ENST00000421939 GRIA2P42262 883 aa27.57■■■□□ 2
CDK9-202ENST00000421939 NRLP54845 237 aa27.57■■■□□ 2
CDK9-202ENST00000421939 SYCP1Q15431 976 aa27.57■■■□□ 2
CDK9-202ENST00000421939 DENND1CQ8IV53 801 aa27.57■■■□□ 2
CDK9-202ENST00000421939 DHX40Q8IX18 779 aaKnown RBP27.57■■■□□ 2
CDK9-202ENST00000421939 PHTF2Q8N3S3 785 aa27.57■■■□□ 2
CDK9-202ENST00000421939 WDTC1Q8N5D0 677 aa27.57■■■□□ 2
CDK9-202ENST00000421939 ZBTB44Q8NCP5 570 aa27.57■■■□□ 2
CDK9-202ENST00000421939 C1orf131Q8NDD1 294 aaKnown RBP27.57■■■□□ 2
CDK9-202ENST00000421939 CPXM1Q96SM3 734 aa27.57■■■□□ 2
CDK9-202ENST00000421939 TRIM62Q9BVG3 475 aa27.57■■■□□ 2
CDK9-202ENST00000421939 DEC1Q9P2X7 70 aa27.57■■■□□ 2
CDK9-202ENST00000421939 DAAM1Q9Y4D1 1078 aa27.57■■■□□ 2
CDK9-202ENST00000421939 ATG2BQ96BY7 2078 aa27.56■■■□□ 2
CDK9-202ENST00000421939 SMTNL1A8MU46 457 aa27.56■■■□□ 2
CDK9-202ENST00000421939 EPHB6O15197 1021 aa27.56■■■□□ 2
CDK9-202ENST00000421939 CACNG3O60359 315 aa27.56■■■□□ 2
CDK9-202ENST00000421939 FYNP06241 537 aa27.56■■■□□ 2
CDK9-202ENST00000421939 CYP11B1P15538 503 aa27.56■■■□□ 2
CDK9-202ENST00000421939 HARS2P49590 506 aaKnown RBP27.56■■■□□ 2
CDK9-202ENST00000421939 ZNF165P49910 485 aa27.56■■■□□ 2
CDK9-202ENST00000421939 POLR2FP61218 127 aaKnown RBP27.56■■■□□ 2
CDK9-202ENST00000421939 UBXN1Q04323 297 aa27.56■■■□□ 2
CDK9-202ENST00000421939 PREPLQ4J6C6 727 aaPredicted RBP27.56■■■□□ 2
CDK9-202ENST00000421939 SFTPA1Q8IWL2 248 aa27.56■■■□□ 2
CDK9-202ENST00000421939 ATRIPQ8WXE1 791 aa27.56■■■□□ 2
CDK9-202ENST00000421939 ACDQ96AP0 544 aa27.56■■■□□ 2
CDK9-202ENST00000421939 PPP1R13BQ96KQ4 1090 aa27.56■■■□□ 2
CDK9-202ENST00000421939 SEMA4AQ9H3S1 761 aa27.56■■■□□ 2
CDK9-202ENST00000421939 TJP2Q9UDY2 1190 aa27.56■■■□□ 2
CDK9-202ENST00000421939 SYCE3A1L190 88 aa27.55■■■□□ 2
CDK9-202ENST00000421939 PRR23AA6NEV1 266 aa27.55■■■□□ 2
CDK9-202ENST00000421939 GFRA3O60609 400 aa27.55■■■□□ 2
CDK9-202ENST00000421939 NCAM1P13591 858 aa27.55■■■□□ 2
CDK9-202ENST00000421939 CHKAP35790 457 aa27.55■■■□□ 2
CDK9-202ENST00000421939 SEC13P55735 322 aa27.55■■■□□ 2
CDK9-202ENST00000421939 BEND5Q7L4P6 421 aa27.55■■■□□ 2
CDK9-202ENST00000421939 DQX1Q8TE96 717 aaKnown RBP27.55■■■□□ 2
CDK9-202ENST00000421939 USP33Q8TEY7 942 aa27.55■■■□□ 2
CDK9-202ENST00000421939 BHMTQ93088 406 aa27.55■■■□□ 2
CDK9-202ENST00000421939 PCMTD1Q96MG8 357 aaPredicted RBP27.55■■■□□ 2
CDK9-202ENST00000421939 XPO6Q96QU8 1125 aaKnown RBP27.55■■■□□ 2
CDK9-202ENST00000421939 DNAJC17Q9NVM6 304 aaKnown RBP27.55■■■□□ 2
CDK9-202ENST00000421939 GRAMD4Q6IC98 578 aa27.54■■■□□ 2
CDK9-202ENST00000421939 CPXM2Q8N436 756 aa27.54■■■□□ 2
CDK9-202ENST00000421939 ERGIC2Q96RQ1 377 aa27.54■■■□□ 2
CDK9-202ENST00000421939 PDCL3Q9H2J4 239 aa27.54■■■□□ 2
CDK9-202ENST00000421939 SLC8A2Q9UPR5 921 aa27.54■■■□□ 2
CDK9-202ENST00000421939 NAALADL1Q9UQQ1 740 aa27.54■■■□□ 2
CDK9-202ENST00000421939 A0A0A0MRY4 1105 aa27.53■■■□□ 2
CDK9-202ENST00000421939 LATS1O95835 1130 aa27.53■■■□□ 2
CDK9-202ENST00000421939 IGLV3-27P01718 113 aa27.53■■■□□ 2
CDK9-202ENST00000421939 HOXA6P31267 233 aa27.53■■■□□ 2
CDK9-202ENST00000421939 JAM2P57087 298 aa27.53■■■□□ 2
CDK9-202ENST00000421939 C2orf27AQ580R0 203 aa27.53■■■□□ 2
CDK9-202ENST00000421939 ASCL5Q7RTU5 278 aa27.53■■■□□ 2
CDK9-202ENST00000421939 FAM217AQ8IXS0 508 aa27.53■■■□□ 2
CDK9-202ENST00000421939 TERB1Q8NA31 727 aa27.53■■■□□ 2
CDK9-202ENST00000421939 NEK11Q8NG66 645 aa27.53■■■□□ 2
CDK9-202ENST00000421939 IPO4Q8TEX9 1081 aaKnown RBP27.53■■■□□ 2
CDK9-202ENST00000421939 PIWIL1Q96J94 861 aaKnown RBP27.53■■■□□ 2
CDK9-202ENST00000421939 SERPINB11Q96P15 392 aa27.53■■■□□ 2
CDK9-202ENST00000421939 POPDC2Q9HBU9 364 aa27.53■■■□□ 2
CDK9-202ENST00000421939 NLRC4Q9NPP4 1024 aa27.53■■■□□ 2
CDK9-202ENST00000421939 CAPN9O14815 690 aa27.52■■■□□ 2
CDK9-202ENST00000421939 LILRB5O75023 590 aa27.52■■■□□ 2
CDK9-202ENST00000421939 PENKP01210 267 aaPredicted RBP27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms