RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 DUSP9Q99956 384 aaKnown RBP8.53□□□□□ -1.04
VIM-202ENST00000421459 GPR174Q9BXC1 333 aa8.53□□□□□ -1.04
VIM-202ENST00000421459 MIR1-1HGQ9H1L0 117 aa8.53□□□□□ -1.04
VIM-202ENST00000421459 FBXO44Q9H4M3 255 aa8.53□□□□□ -1.04
VIM-202ENST00000421459 MMRN2Q9H8L6 949 aa8.53□□□□□ -1.04
VIM-202ENST00000421459 DNAAF2Q9NVR5 837 aaKnown RBP8.53□□□□□ -1.04
VIM-202ENST00000421459 WSB2Q9NYS7 404 aaPredicted RBP8.53□□□□□ -1.04
VIM-202ENST00000421459 MARK1Q9P0L2 795 aa8.53□□□□□ -1.04
VIM-202ENST00000421459 WDR35Q9P2L0 1181 aa8.53□□□□□ -1.04
VIM-202ENST00000421459 RASAL2Q9UJF2 1139 aa8.53□□□□□ -1.04
VIM-202ENST00000421459 DNMT3LQ9UJW3 386 aa8.53□□□□□ -1.04
VIM-202ENST00000421459 NAGPAQ9UK23 515 aa8.53□□□□□ -1.04
VIM-202ENST00000421459 LSM7Q9UK45 103 aaKnown RBP8.53□□□□□ -1.04
VIM-202ENST00000421459 FBXO10Q9UK96 956 aa8.53□□□□□ -1.04
VIM-202ENST00000421459 MAPK8IP1Q9UQF2 711 aa8.53□□□□□ -1.04
VIM-202ENST00000421459 MYOFQ9NZM1 2061 aa8.53□□□□□ -1.04
VIM-202ENST00000421459 ADAMTS9Q9P2N4 1935 aa8.52□□□□□ -1.04
VIM-202ENST00000421459 A0A1W2PQD8 194 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 FAM221BA6H8Z2 402 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 ZBTB24O43167 697 aaPredicted RBP8.52□□□□□ -1.05
VIM-202ENST00000421459 TSPAN3O60637 253 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 SYPP08247 313 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 PRR29P0C7W0 189 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 FTH1P19P0C7X4 201 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 NCAM1P13591 858 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 PDIA4P13667 645 aaKnown RBP8.52□□□□□ -1.05
VIM-202ENST00000421459 HLA-EP13747 358 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 PRKCHP24723 683 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 CD6P30203 668 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 CORO1AP31146 461 aaKnown RBP8.52□□□□□ -1.05
VIM-202ENST00000421459 HOXD12P35452 270 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 PLA2G4AP47712 749 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 KIF11P52732 1056 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 COPAP53621 1224 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 AP3M2P53677 418 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 MFAP3P55082 362 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 PPP3CAQ08209 521 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 DCAF12L1Q5VU92 463 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 TMEM215Q68D42 235 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 FAM124AQ86V42 546 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 UNC93AQ86WB7 457 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 DENND1CQ8IV53 801 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 NAXDQ8IW45 347 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 ZCCHC9Q8N567 271 aaKnown RBP8.52□□□□□ -1.05
VIM-202ENST00000421459 ZNF366Q8N895 744 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 MDM1Q8TC05 714 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 SEMA4DQ92854 862 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 EEF2KMTQ96G04 330 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 MAGEF1Q9HAY2 307 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 PRDM16Q9HAZ2 1276 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 EXOC1Q9NV70 894 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 FAM13BQ9NYF5 915 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 CGNQ9P2M7 1197 aaKnown RBP8.52□□□□□ -1.05
VIM-202ENST00000421459 AGO1Q9UL18 857 aaKnown RBP8.52□□□□□ -1.05
VIM-202ENST00000421459 IGF2RP11717 2491 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 PCDH15Q96QU1 1955 aa8.52□□□□□ -1.05
VIM-202ENST00000421459 A0A1B0GVL5 298 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 GOLGA8CPA6NN73 597 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 MEI4A8MW99 385 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 TULP2O00295 520 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 KCNK3O14649 394 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 CBFA2T3O75081 653 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 PENKP01210 267 aaPredicted RBP8.51□□□□□ -1.05
VIM-202ENST00000421459 RPN1P04843 607 aaKnown RBP8.51□□□□□ -1.05
VIM-202ENST00000421459 SLFN14P0C7P3 912 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 ZSCAN22P10073 491 aaPredicted RBP8.51□□□□□ -1.05
VIM-202ENST00000421459 P4HA1P13674 534 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 DPP6P42658 865 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 TPMTP51580 245 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 VAMP7P51809 220 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 DNM1Q05193 864 aaKnown RBP8.51□□□□□ -1.05
VIM-202ENST00000421459 INCA1Q0VD86 236 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 ZNF234Q14588 700 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 SYCP2LQ5T4T6 812 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 LAYNQ6UX15 382 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 TMPRSS6Q8IU80 811 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 SLC9A9Q8IVB4 645 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 CEP57L1Q8IYX8 460 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 GOLGA5Q8TBA6 731 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 TMC2Q8TDI7 906 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 PIWIL1Q96J94 861 aaKnown RBP8.51□□□□□ -1.05
VIM-202ENST00000421459 NT5C1AQ9BXI3 368 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 GAREM1Q9H706 876 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 ITM2CQ9NQX7 267 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 USP36Q9P275 1121 aaKnown RBP8.51□□□□□ -1.05
VIM-202ENST00000421459 THAP10Q9P2Z0 257 aaPredicted RBP8.51□□□□□ -1.05
VIM-202ENST00000421459 EIF2B4Q9UI10 523 aaKnown RBP8.51□□□□□ -1.05
VIM-202ENST00000421459 FNDC3AQ9Y2H6 1198 aaKnown RBP8.51□□□□□ -1.05
VIM-202ENST00000421459 PCDHB9Q9Y5E1 797 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 PCDHA5Q9Y5H7 936 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 USP3Q9Y6I4 520 aa8.51□□□□□ -1.05
VIM-202ENST00000421459 A0A1B0GTW7 788 aa8.5□□□□□ -1.05
VIM-202ENST00000421459 A0A1B0GVT2 93 aa8.5□□□□□ -1.05
VIM-202ENST00000421459 SLC12A8A0AV02 714 aa8.5□□□□□ -1.05
VIM-202ENST00000421459 H0Y626 953 aa8.5□□□□□ -1.05
VIM-202ENST00000421459 GFRA2O00451 464 aa8.5□□□□□ -1.05
VIM-202ENST00000421459 PDXKO00764 312 aa8.5□□□□□ -1.05
VIM-202ENST00000421459 SYNCRIPO60506 623 aaKnown RBP8.5□□□□□ -1.05
VIM-202ENST00000421459 CILPO75339 1184 aa8.5□□□□□ -1.05
VIM-202ENST00000421459 TRIM16O95361 564 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms