RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 GNA14O95837 355 aa22.37■■□□□ 1.17
PTPN4-202ENST00000420482 SETSIPP0DME0 302 aa22.37■■□□□ 1.17
PTPN4-202ENST00000420482 DPP6P42658 865 aa22.37■■□□□ 1.17
PTPN4-202ENST00000420482 KLHL10Q6JEL2 608 aa22.37■■□□□ 1.17
PTPN4-202ENST00000420482 Q6ZNB5 142 aa22.37■■□□□ 1.17
PTPN4-202ENST00000420482 CHPFQ8IZ52 775 aa22.37■■□□□ 1.17
PTPN4-202ENST00000420482 SIX6OS1Q8N1H7 587 aa22.37■■□□□ 1.17
PTPN4-202ENST00000420482 OLIG1Q8TAK6 271 aa22.37■■□□□ 1.17
PTPN4-202ENST00000420482 PAEPP09466 180 aa22.36■■□□□ 1.17
PTPN4-202ENST00000420482 P2RY2P41231 377 aa22.36■■□□□ 1.17
PTPN4-202ENST00000420482 DHPSP49366 369 aaPredicted RBP22.36■■□□□ 1.17
PTPN4-202ENST00000420482 PDE4CQ08493 712 aa22.36■■□□□ 1.17
PTPN4-202ENST00000420482 LRMPQ12912 555 aa22.36■■□□□ 1.17
PTPN4-202ENST00000420482 STILQ15468 1287 aa22.36■■□□□ 1.17
PTPN4-202ENST00000420482 SPDYCQ5MJ68 293 aa22.36■■□□□ 1.17
PTPN4-202ENST00000420482 STPG1Q5TH74 334 aa22.36■■□□□ 1.17
PTPN4-202ENST00000420482 RNF43Q68DV7 783 aa22.36■■□□□ 1.17
PTPN4-202ENST00000420482 PM20D1Q6GTS8 502 aa22.36■■□□□ 1.17
PTPN4-202ENST00000420482 RNF139Q8WU17 664 aa22.36■■□□□ 1.17
PTPN4-202ENST00000420482 ANTXRLA6NF34 631 aa22.35■■□□□ 1.17
PTPN4-202ENST00000420482 KHNYNO15037 678 aaKnown RBP22.35■■□□□ 1.17
PTPN4-202ENST00000420482 FGFR1OPO95684 399 aaKnown RBP22.35■■□□□ 1.17
PTPN4-202ENST00000420482 HMBSP08397 361 aa22.35■■□□□ 1.17
PTPN4-202ENST00000420482 CORO1AP31146 461 aaKnown RBP22.35■■□□□ 1.17
PTPN4-202ENST00000420482 TMEM270Q6UE05 265 aa22.35■■□□□ 1.17
PTPN4-202ENST00000420482 PPM1KQ8N3J5 372 aa22.35■■□□□ 1.17
PTPN4-202ENST00000420482 NELFBQ8WX92 580 aa22.35■■□□□ 1.17
PTPN4-202ENST00000420482 BHMTQ93088 406 aa22.35■■□□□ 1.17
PTPN4-202ENST00000420482 PLD4Q96BZ4 506 aa22.35■■□□□ 1.17
PTPN4-202ENST00000420482 ULBP1Q9BZM6 244 aa22.35■■□□□ 1.17
PTPN4-202ENST00000420482 ZDHHC4Q9NPG8 344 aa22.35■■□□□ 1.17
PTPN4-202ENST00000420482 NUP205Q92621 2012 aa22.35■■□□□ 1.17
PTPN4-202ENST00000420482 SLC12A8A0AV02 714 aa22.34■■□□□ 1.17
PTPN4-202ENST00000420482 GFRA2O00451 464 aa22.34■■□□□ 1.17
PTPN4-202ENST00000420482 NPC1O15118 1278 aa22.34■■□□□ 1.17
PTPN4-202ENST00000420482 ZNF217O75362 1048 aa22.34■■□□□ 1.17
PTPN4-202ENST00000420482 CHRM1P11229 460 aaPredicted RBP22.34■■□□□ 1.17
PTPN4-202ENST00000420482 HNRNPLP14866 589 aaKnown RBP eCLIP22.34■■□□□ 1.17
PTPN4-202ENST00000420482 HARS2P49590 506 aaKnown RBP22.34■■□□□ 1.17
PTPN4-202ENST00000420482 SLC36A4Q6YBV0 504 aa22.34■■□□□ 1.17
PTPN4-202ENST00000420482 UCMAQ8WVF2 138 aa22.34■■□□□ 1.17
PTPN4-202ENST00000420482 KCTD13Q8WZ19 329 aa22.34■■□□□ 1.17
PTPN4-202ENST00000420482 EDEM2Q9BV94 578 aa22.34■■□□□ 1.17
PTPN4-202ENST00000420482 SMOC1Q9H4F8 434 aa22.34■■□□□ 1.17
PTPN4-202ENST00000420482 CNGB3Q9NQW8 809 aa22.34■■□□□ 1.17
PTPN4-202ENST00000420482 PCDHB4Q9Y5E5 795 aa22.34■■□□□ 1.17
PTPN4-202ENST00000420482 TRIM24O15164 1050 aa22.33■■□□□ 1.17
PTPN4-202ENST00000420482 AP5Z1O43299 807 aa22.33■■□□□ 1.17
PTPN4-202ENST00000420482 CD44P16070 742 aaKnown RBP22.33■■□□□ 1.17
PTPN4-202ENST00000420482 BCKDHBP21953 392 aa22.33■■□□□ 1.17
PTPN4-202ENST00000420482 ZNF445P59923 1031 aa22.33■■□□□ 1.17
PTPN4-202ENST00000420482 ADIGQ0VDE8 80 aa22.33■■□□□ 1.17
PTPN4-202ENST00000420482 PAK1Q13153 545 aa22.33■■□□□ 1.17
PTPN4-202ENST00000420482 MORC3Q14149 939 aa22.33■■□□□ 1.17
PTPN4-202ENST00000420482 TTI2Q6NXR4 508 aa22.33■■□□□ 1.17
PTPN4-202ENST00000420482 DENND1CQ8IV53 801 aa22.33■■□□□ 1.17
PTPN4-202ENST00000420482 CPXM2Q8N436 756 aa22.33■■□□□ 1.17
PTPN4-202ENST00000420482 RLN3Q8WXF3 142 aa22.33■■□□□ 1.17
PTPN4-202ENST00000420482 GOLGA1Q92805 767 aa22.33■■□□□ 1.17
PTPN4-202ENST00000420482 ABCC13Q9NSE7 274 aa22.33■■□□□ 1.17
PTPN4-202ENST00000420482 PLK2Q9NYY3 685 aa22.33■■□□□ 1.17
PTPN4-202ENST00000420482 AGO1Q9UL18 857 aaKnown RBP22.33■■□□□ 1.17
PTPN4-202ENST00000420482 CTNND2Q9UQB3 1225 aa22.33■■□□□ 1.17
PTPN4-202ENST00000420482 SLC27A6Q9Y2P4 619 aa22.33■■□□□ 1.17
PTPN4-202ENST00000420482 HBS1LQ9Y450 684 aaKnown RBP22.33■■□□□ 1.17
PTPN4-202ENST00000420482 USP24Q9UPU5 2620 aa22.33■■□□□ 1.16
PTPN4-202ENST00000420482 O00370 1275 aa22.32■■□□□ 1.16
PTPN4-202ENST00000420482 PENKP01210 267 aaPredicted RBP22.32■■□□□ 1.16
PTPN4-202ENST00000420482 KLKB1P03952 638 aa22.32■■□□□ 1.16
PTPN4-202ENST00000420482 KCNA4P22459 653 aa22.32■■□□□ 1.16
PTPN4-202ENST00000420482 ZNF132P52740 706 aa22.32■■□□□ 1.16
PTPN4-202ENST00000420482 STARD3Q14849 445 aa22.32■■□□□ 1.16
PTPN4-202ENST00000420482 DAB2IPQ5VWQ8 1189 aa22.32■■□□□ 1.16
PTPN4-202ENST00000420482 EGFLAMQ63HQ2 1017 aa22.32■■□□□ 1.16
PTPN4-202ENST00000420482 LCLAT1Q6UWP7 414 aa22.32■■□□□ 1.16
PTPN4-202ENST00000420482 SCML4Q8N228 414 aa22.32■■□□□ 1.16
PTPN4-202ENST00000420482 UBA3Q8TBC4 463 aa22.32■■□□□ 1.16
PTPN4-202ENST00000420482 PIGKQ92643 395 aa22.32■■□□□ 1.16
PTPN4-202ENST00000420482 FBXO10Q9UK96 956 aa22.32■■□□□ 1.16
PTPN4-202ENST00000420482 PPP1R3GB7ZBB8 358 aa22.31■■□□□ 1.16
PTPN4-202ENST00000420482 PRRT4C9JH25 899 aa22.31■■□□□ 1.16
PTPN4-202ENST00000420482 CISD3P0C7P0 127 aa22.31■■□□□ 1.16
PTPN4-202ENST00000420482 GABRG2P18507 467 aa22.31■■□□□ 1.16
PTPN4-202ENST00000420482 WASP42768 502 aa22.31■■□□□ 1.16
PTPN4-202ENST00000420482 GCNT1Q02742 428 aa22.31■■□□□ 1.16
PTPN4-202ENST00000420482 MAP7D1Q3KQU3 841 aa22.31■■□□□ 1.16
PTPN4-202ENST00000420482 BSPRYQ5W0U4 402 aa22.31■■□□□ 1.16
PTPN4-202ENST00000420482 TCEAL6Q6IPX3 200 aa22.31■■□□□ 1.16
PTPN4-202ENST00000420482 TOGARAM2Q6ZUX3 1019 aa22.31■■□□□ 1.16
PTPN4-202ENST00000420482 UBR7Q8N806 425 aa22.31■■□□□ 1.16
PTPN4-202ENST00000420482 TRIML1Q8N9V2 468 aa22.31■■□□□ 1.16
PTPN4-202ENST00000420482 IPO4Q8TEX9 1081 aaKnown RBP22.31■■□□□ 1.16
PTPN4-202ENST00000420482 DDI1Q8WTU0 396 aa22.31■■□□□ 1.16
PTPN4-202ENST00000420482 TCEAL3Q969E4 200 aa22.31■■□□□ 1.16
PTPN4-202ENST00000420482 GABRG3Q99928 467 aa22.31■■□□□ 1.16
PTPN4-202ENST00000420482 NUSAP1Q9BXS6 441 aaKnown RBP22.31■■□□□ 1.16
PTPN4-202ENST00000420482 SLC2A11Q9BYW1 496 aa22.31■■□□□ 1.16
PTPN4-202ENST00000420482 RXFP3Q9NSD7 469 aa22.31■■□□□ 1.16
PTPN4-202ENST00000420482 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.31■■□□□ 1.16
PTPN4-202ENST00000420482 THADAQ6YHU6 1953 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms