RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 IL17RBQ9NRM6 502 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 ASB6Q9NWX5 421 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 ZNHIT2Q9UHR6 403 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 ADAMTS5Q9UNA0 930 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 INSL6Q9Y581 213 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 CDC42BPAQ5VT25 1732 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 COL15A1P39059 1388 aa3.09□□□□□ -1.92
VPS41-206ENST00000418457 GPRASP1Q5JY77 1395 aa3.09□□□□□ -1.92
VPS41-206ENST00000418457 FNDC1Q4ZHG4 1894 aaPredicted RBP3.09□□□□□ -1.92
VPS41-206ENST00000418457 ANKRD50Q9ULJ7 1429 aa3.09□□□□□ -1.92
VPS41-206ENST00000418457 NUP153P49790 1475 aaKnown RBP3.09□□□□□ -1.92
VPS41-206ENST00000418457 PLXNC1O60486 1568 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 RNF17Q9BXT8 1623 aaKnown RBP3.08□□□□□ -1.92
VPS41-206ENST00000418457 A0A087WV62 115 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 GOLGA6L3A6NEY3 463 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 A8MVJ9 347 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 ZSCAN9O15535 394 aaPredicted RBP3.08□□□□□ -1.92
VPS41-206ENST00000418457 FFAR2O15552 330 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 NUDT3O95989 172 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 VIPP01282 170 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 SRGAP2BP0DMP2 458 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 MYCLP12524 364 aaPredicted RBP3.08□□□□□ -1.92
VPS41-206ENST00000418457 CREB1P16220 341 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 PECAM1P16284 738 aaPredicted RBP3.08□□□□□ -1.92
VPS41-206ENST00000418457 WT1P19544 449 aaPredicted RBP3.08□□□□□ -1.92
VPS41-206ENST00000418457 GPD1P21695 349 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 HTR7P34969 479 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 EIF4A1P60842 406 aaKnown RBP3.08□□□□□ -1.92
VPS41-206ENST00000418457 ATP1A4Q13733 1029 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 BECN1Q14457 450 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 ST3GAL2Q16842 350 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 ARHGAP15Q53QZ3 475 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 C10orf62Q5T681 223 aaPredicted RBP3.08□□□□□ -1.92
VPS41-206ENST00000418457 STRIP1Q5VSL9 837 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 DENND2CQ68D51 928 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 CEP85Q6P2H3 762 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 PTCHD4Q6ZW05 846 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 ARHGEF25Q86VW2 580 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 METTL25Q8N6Q8 603 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 ENAHQ8N8S7 591 aaPredicted RBP3.08□□□□□ -1.92
VPS41-206ENST00000418457 NGDNQ8NEJ9 315 aaKnown RBP3.08□□□□□ -1.92
VPS41-206ENST00000418457 EXOC6Q8TAG9 804 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 SUN3Q8TAQ9 357 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 IPO4Q8TEX9 1081 aaKnown RBP3.08□□□□□ -1.92
VPS41-206ENST00000418457 POF1BQ8WVV4 589 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 C18orf8Q96DM3 657 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 VPS50Q96JG6 964 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 LENG8Q96PV6 779 aaPredicted RBP3.08□□□□□ -1.92
VPS41-206ENST00000418457 TIMP4Q99727 224 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 KLK15Q9H2R5 256 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 AMFRQ9UKV5 643 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 CA14Q9ULX7 337 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 LAS1LQ9Y4W2 734 aaKnown RBP3.08□□□□□ -1.92
VPS41-206ENST00000418457 ABCC2Q92887 1545 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 DISP1Q96F81 1524 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 GPATCH8Q9UKJ3 1502 aaKnown RBP3.08□□□□□ -1.92
VPS41-206ENST00000418457 UNC13BO14795 1591 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 SYNMO15061 1565 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 MAST1Q9Y2H9 1570 aa3.08□□□□□ -1.92
VPS41-206ENST00000418457 MYO5CQ9NQX4 1742 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 OR2W5A6NFC9 320 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 PIP5K1BO14986 540 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 SPRY2O43597 315 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 TMPRSS11DO60235 418 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 SKAP2O75563 359 aaPredicted RBP3.07□□□□□ -1.92
VPS41-206ENST00000418457 WDR47O94967 919 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 PDE8BO95263 885 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 GLP2RO95838 553 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 HNRNPCP07910 306 aaKnown RBP eCLIP3.07□□□□□ -1.92
VPS41-206ENST00000418457 TMEM225BP0DP42 221 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 BMP5P22003 454 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 ITPKBP27987 946 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 PTH2RP49190 550 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 CLK3P49761 638 aaKnown RBP3.07□□□□□ -1.92
VPS41-206ENST00000418457 ICA1Q05084 483 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 ACOX1Q15067 660 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 PUM3Q15397 648 aaKnown RBP3.07□□□□□ -1.92
VPS41-206ENST00000418457 ZNF362Q5T0B9 420 aaPredicted RBP3.07□□□□□ -1.92
VPS41-206ENST00000418457 TMTC4Q5T4D3 741 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 GGT6Q6P531 493 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 NAPRTQ6XQN6 538 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 AMIGO2Q86SJ2 522 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 TTC30AQ86WT1 665 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 RASGRP3Q8IV61 690 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 P3H2Q8IVL5 708 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 SFTPA1Q8IWL2 248 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 SARAFQ96BY9 339 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 CTHRC1Q96CG8 243 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 WDYHV1Q96HA8 205 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 BBC3Q96PG8 261 aaPredicted RBP3.07□□□□□ -1.92
VPS41-206ENST00000418457 WDR24Q96S15 920 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 PRPF18Q99633 342 aaKnown RBP3.07□□□□□ -1.92
VPS41-206ENST00000418457 THAP7Q9BT49 309 aaPredicted RBP3.07□□□□□ -1.92
VPS41-206ENST00000418457 RIOX1Q9H6W3 641 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 SNX15Q9NRS6 342 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 SEMA4GQ9NTN9 838 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 MGAT4CQ9UBM8 478 aa3.07□□□□□ -1.92
VPS41-206ENST00000418457 CFDP1Q9UEE9 299 aaPredicted RBP3.07□□□□□ -1.92
VPS41-206ENST00000418457 ISY1Q9ULR0 285 aaKnown RBP3.07□□□□□ -1.92
VPS41-206ENST00000418457 DTNAQ9Y4J8 743 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms