RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 PLCB1Q9NQ66 1216 aa21.57■■□□□ 1.04
PKNOX1-202ENST00000418336 LIMA1Q9UHB6 759 aaKnown RBP21.57■■□□□ 1.04
PKNOX1-202ENST00000418336 SLC12A8A0AV02 714 aa21.56■■□□□ 1.04
PKNOX1-202ENST00000418336 LRRC10BA6NIK2 292 aa21.56■■□□□ 1.04
PKNOX1-202ENST00000418336 EPHB6O15197 1021 aa21.56■■□□□ 1.04
PKNOX1-202ENST00000418336 HRO43593 1189 aa21.56■■□□□ 1.04
PKNOX1-202ENST00000418336 FBXO21O94952 628 aa21.56■■□□□ 1.04
PKNOX1-202ENST00000418336 HMBSP08397 361 aa21.56■■□□□ 1.04
PKNOX1-202ENST00000418336 HNRNPLP14866 589 aaKnown RBP eCLIP21.56■■□□□ 1.04
PKNOX1-202ENST00000418336 UCHL3P15374 230 aa21.56■■□□□ 1.04
PKNOX1-202ENST00000418336 FNTBP49356 437 aa21.56■■□□□ 1.04
PKNOX1-202ENST00000418336 GOLGA8FQ08AF8 430 aa21.56■■□□□ 1.04
PKNOX1-202ENST00000418336 GOLGA8DPQ0D2H9 430 aa21.56■■□□□ 1.04
PKNOX1-202ENST00000418336 ZC3H14Q6PJT7 736 aaKnown RBP21.56■■□□□ 1.04
PKNOX1-202ENST00000418336 SASS6Q6UVJ0 657 aa21.56■■□□□ 1.04
PKNOX1-202ENST00000418336 SYT13Q7L8C5 426 aa21.56■■□□□ 1.04
PKNOX1-202ENST00000418336 SCUBE3Q8IX30 993 aa21.56■■□□□ 1.04
PKNOX1-202ENST00000418336 NAT16Q8N8M0 369 aa21.56■■□□□ 1.04
PKNOX1-202ENST00000418336 OLA1Q9NTK5 396 aaKnown RBP21.56■■□□□ 1.04
PKNOX1-202ENST00000418336 LSM7Q9UK45 103 aaKnown RBP21.56■■□□□ 1.04
PKNOX1-202ENST00000418336 SIK3Q9Y2K2 1263 aa21.56■■□□□ 1.04
PKNOX1-202ENST00000418336 EP300Q09472 2414 aaPredicted RBP21.56■■□□□ 1.04
PKNOX1-202ENST00000418336 E5RJQ4 531 aa21.55■■□□□ 1.04
PKNOX1-202ENST00000418336 MSI1O43347 362 aaKnown RBP21.55■■□□□ 1.04
PKNOX1-202ENST00000418336 MED7O43513 233 aa21.55■■□□□ 1.04
PKNOX1-202ENST00000418336 LMNAP02545 664 aaKnown RBP21.55■■□□□ 1.04
PKNOX1-202ENST00000418336 LTFP02788 710 aa21.55■■□□□ 1.04
PKNOX1-202ENST00000418336 GRIA2P42262 883 aa21.55■■□□□ 1.04
PKNOX1-202ENST00000418336 MYL5Q02045 173 aa21.55■■□□□ 1.04
PKNOX1-202ENST00000418336 KDSRQ06136 332 aa21.55■■□□□ 1.04
PKNOX1-202ENST00000418336 PDCLQ13371 301 aa21.55■■□□□ 1.04
PKNOX1-202ENST00000418336 EIF4EBP2Q13542 120 aaPredicted RBP21.55■■□□□ 1.04
PKNOX1-202ENST00000418336 DRAP1Q14919 205 aaPredicted RBP21.55■■□□□ 1.04
PKNOX1-202ENST00000418336 EMC10Q5UCC4 262 aa21.55■■□□□ 1.04
PKNOX1-202ENST00000418336 TPGS1Q6ZTW0 290 aa21.55■■□□□ 1.04
PKNOX1-202ENST00000418336 BEND5Q7L4P6 421 aa21.55■■□□□ 1.04
PKNOX1-202ENST00000418336 DDX1Q92499 740 aaKnown RBP21.55■■□□□ 1.04
PKNOX1-202ENST00000418336 PLD4Q96BZ4 506 aa21.55■■□□□ 1.04
PKNOX1-202ENST00000418336 CPXM1Q96SM3 734 aa21.55■■□□□ 1.04
PKNOX1-202ENST00000418336 LSM14BQ9BX40 385 aaKnown RBP21.55■■□□□ 1.04
PKNOX1-202ENST00000418336 MIS12Q9H081 205 aa21.55■■□□□ 1.04
PKNOX1-202ENST00000418336 VPS16Q9H269 839 aa21.55■■□□□ 1.04
PKNOX1-202ENST00000418336 LHX5Q9H2C1 402 aa21.55■■□□□ 1.04
PKNOX1-202ENST00000418336 HBS1LQ9Y450 684 aaKnown RBP21.55■■□□□ 1.04
PKNOX1-202ENST00000418336 NEDD8-MDP1E9PL57 170 aa21.54■■□□□ 1.04
PKNOX1-202ENST00000418336 ATG13O75143 517 aa21.54■■□□□ 1.04
PKNOX1-202ENST00000418336 TYRP14679 529 aa21.54■■□□□ 1.04
PKNOX1-202ENST00000418336 TNFRSF4P43489 277 aa21.54■■□□□ 1.04
PKNOX1-202ENST00000418336 NRLP54845 237 aa21.54■■□□□ 1.04
PKNOX1-202ENST00000418336 SEC13P55735 322 aa21.54■■□□□ 1.04
PKNOX1-202ENST00000418336 SRSF5Q13243 272 aaKnown RBP21.54■■□□□ 1.04
PKNOX1-202ENST00000418336 ANO4Q32M45 955 aa21.54■■□□□ 1.04
PKNOX1-202ENST00000418336 TOGARAM2Q6ZUX3 1019 aa21.54■■□□□ 1.04
PKNOX1-202ENST00000418336 RSRC2Q7L4I2 434 aaKnown RBP21.54■■□□□ 1.04
PKNOX1-202ENST00000418336 WDR5BQ86VZ2 330 aa21.54■■□□□ 1.04
PKNOX1-202ENST00000418336 LONP2Q86WA8 852 aa21.54■■□□□ 1.04
PKNOX1-202ENST00000418336 DENND1CQ8IV53 801 aa21.54■■□□□ 1.04
PKNOX1-202ENST00000418336 CPXM2Q8N436 756 aa21.54■■□□□ 1.04
PKNOX1-202ENST00000418336 TERB1Q8NA31 727 aa21.54■■□□□ 1.04
PKNOX1-202ENST00000418336 IL17RCQ8NAC3 791 aa21.54■■□□□ 1.04
PKNOX1-202ENST00000418336 EXOC4Q96A65 974 aa21.54■■□□□ 1.04
PKNOX1-202ENST00000418336 DCLK3Q9C098 648 aa21.54■■□□□ 1.04
PKNOX1-202ENST00000418336 ARHGEF4Q9NR80 690 aa21.54■■□□□ 1.04
PKNOX1-202ENST00000418336 CLEC4EQ9ULY5 219 aa21.54■■□□□ 1.04
PKNOX1-202ENST00000418336 ZNF510Q9Y2H8 683 aa21.54■■□□□ 1.04
PKNOX1-202ENST00000418336 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.53■■□□□ 1.04
PKNOX1-202ENST00000418336 ADAM23O75077 832 aa21.53■■□□□ 1.04
PKNOX1-202ENST00000418336 IGLV3-25P01717 112 aa21.53■■□□□ 1.04
PKNOX1-202ENST00000418336 USP8P40818 1118 aa21.53■■□□□ 1.04
PKNOX1-202ENST00000418336 ACADSBP45954 432 aa21.53■■□□□ 1.04
PKNOX1-202ENST00000418336 COPB1P53618 953 aaKnown RBP21.53■■□□□ 1.04
PKNOX1-202ENST00000418336 DMC1Q14565 340 aa21.53■■□□□ 1.04
PKNOX1-202ENST00000418336 TAF5Q15542 800 aa21.53■■□□□ 1.04
PKNOX1-202ENST00000418336 SYPL2Q5VXT5 272 aa21.53■■□□□ 1.04
PKNOX1-202ENST00000418336 RNF43Q68DV7 783 aa21.53■■□□□ 1.04
PKNOX1-202ENST00000418336 DHX40Q8IX18 779 aaKnown RBP21.53■■□□□ 1.04
PKNOX1-202ENST00000418336 ATRIPQ8WXE1 791 aa21.53■■□□□ 1.04
PKNOX1-202ENST00000418336 BBS2Q9BXC9 721 aa21.53■■□□□ 1.04
PKNOX1-202ENST00000418336 CD248Q9HCU0 757 aa21.53■■□□□ 1.04
PKNOX1-202ENST00000418336 WDR35Q9P2L0 1181 aa21.53■■□□□ 1.04
PKNOX1-202ENST00000418336 STRIP2Q9ULQ0 834 aa21.53■■□□□ 1.04
PKNOX1-202ENST00000418336 MMP17Q9ULZ9 603 aa21.53■■□□□ 1.04
PKNOX1-202ENST00000418336 NAALADL1Q9UQQ1 740 aa21.53■■□□□ 1.04
PKNOX1-202ENST00000418336 STARD13Q9Y3M8 1113 aa21.53■■□□□ 1.04
PKNOX1-202ENST00000418336 DCHS1Q96JQ0 3298 aa21.53■■□□□ 1.04
PKNOX1-202ENST00000418336 MYO18AQ92614 2054 aaKnown RBP21.52■■□□□ 1.04
PKNOX1-202ENST00000418336 CCDC163A0A0D9SF12 145 aa21.52■■□□□ 1.04
PKNOX1-202ENST00000418336 PRRT4C9JH25 899 aa21.52■■□□□ 1.04
PKNOX1-202ENST00000418336 F8VZ95 297 aa21.52■■□□□ 1.04
PKNOX1-202ENST00000418336 APODP05090 189 aa21.52■■□□□ 1.04
PKNOX1-202ENST00000418336 CDH5P33151 784 aaPredicted RBP21.52■■□□□ 1.04
PKNOX1-202ENST00000418336 PXNP49023 591 aaPredicted RBP21.52■■□□□ 1.04
PKNOX1-202ENST00000418336 JAM2P57087 298 aa21.52■■□□□ 1.04
PKNOX1-202ENST00000418336 MRPS21P82921 87 aaKnown RBP21.52■■□□□ 1.04
PKNOX1-202ENST00000418336 PPP2R5DQ14738 602 aa21.52■■□□□ 1.04
PKNOX1-202ENST00000418336 C2orf27AQ580R0 203 aa21.52■■□□□ 1.04
PKNOX1-202ENST00000418336 CAVIN1Q6NZI2 390 aaKnown RBP21.52■■□□□ 1.04
PKNOX1-202ENST00000418336 TMEM92Q6UXU6 159 aa21.52■■□□□ 1.04
PKNOX1-202ENST00000418336 PASD1Q8IV76 773 aa21.52■■□□□ 1.04
PKNOX1-202ENST00000418336 DQX1Q8TE96 717 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms