RNA–Protein interactions for RNA: ENST00000417658.5

PRPF18-203, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 1,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-203ENST00000417658 DHX58Q96C10 678 aa17.2■□□□□ 0.34
PRPF18-203ENST00000417658 HNRNPABQ99729 332 aaKnown RBP17.2■□□□□ 0.34
PRPF18-203ENST00000417658 GPR174Q9BXC1 333 aa17.2■□□□□ 0.34
PRPF18-203ENST00000417658 MKRN2Q9H000 416 aaKnown RBP17.2■□□□□ 0.34
PRPF18-203ENST00000417658 MAGEF1Q9HAY2 307 aa17.2■□□□□ 0.34
PRPF18-203ENST00000417658 PNPLA8Q9NP80 782 aa17.2■□□□□ 0.34
PRPF18-203ENST00000417658 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.2■□□□□ 0.34
PRPF18-203ENST00000417658 THAP10Q9P2Z0 257 aaPredicted RBP17.2■□□□□ 0.34
PRPF18-203ENST00000417658 DKK4Q9UBT3 224 aa17.2■□□□□ 0.34
PRPF18-203ENST00000417658 ZNF510Q9Y2H8 683 aa17.2■□□□□ 0.34
PRPF18-203ENST00000417658 PCDHGB2Q9Y5G2 931 aa17.2■□□□□ 0.34
PRPF18-203ENST00000417658 PCDHA5Q9Y5H7 936 aa17.2■□□□□ 0.34
PRPF18-203ENST00000417658 MYH10P35580 1976 aa17.2■□□□□ 0.34
PRPF18-203ENST00000417658 KNL1Q8NG31 2342 aa17.2■□□□□ 0.34
PRPF18-203ENST00000417658 LAMA5O15230 3695 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 PVALEFA0A1B0GWK0 134 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 LRRIQ3A6PVS8 624 aaPredicted RBP17.19■□□□□ 0.34
PRPF18-203ENST00000417658 HHLA1C9JL84 531 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 SPTLC2O15270 562 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 BCAT2O15382 392 aaPredicted RBP17.19■□□□□ 0.34
PRPF18-203ENST00000417658 CLSTN1O94985 981 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 CER1O95813 267 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 PENKP01210 267 aaPredicted RBP17.19■□□□□ 0.34
PRPF18-203ENST00000417658 FAM200BP0CF97 657 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 RARGP13631 454 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 PSEN1P49768 467 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 TPMTP51580 245 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 COL28A1Q2UY09 1125 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 SCARA5Q6ZMJ2 495 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 TMPRSS7Q7RTY8 843 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 TADA2BQ86TJ2 420 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 TMPRSS6Q8IU80 811 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 C12orf29Q8N999 325 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 SETD7Q8WTS6 366 aaKnown RBP17.19■□□□□ 0.34
PRPF18-203ENST00000417658 UCMAQ8WVF2 138 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 CDC6Q99741 560 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 NUP58Q9BVL2 599 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 PCED1AQ9H1Q7 454 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 GAREM1Q9H706 876 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 NMUR1Q9HB89 426 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 TM7SF3Q9NS93 570 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 PLK2Q9NYY3 685 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 MTMR6Q9Y217 621 aa17.19■□□□□ 0.34
PRPF18-203ENST00000417658 URB1O60287 2271 aaKnown RBP17.19■□□□□ 0.34
PRPF18-203ENST00000417658 KCNJ18B7U540 433 aa17.18■□□□□ 0.34
PRPF18-203ENST00000417658 CYP26A1O43174 497 aa17.18■□□□□ 0.34
PRPF18-203ENST00000417658 SYNCRIPO60506 623 aaKnown RBP17.18■□□□□ 0.34
PRPF18-203ENST00000417658 CILPO75339 1184 aa17.18■□□□□ 0.34
PRPF18-203ENST00000417658 STC2O76061 302 aa17.18■□□□□ 0.34
PRPF18-203ENST00000417658 DKK1O94907 266 aa17.18■□□□□ 0.34
PRPF18-203ENST00000417658 MATKP42679 507 aa17.18■□□□□ 0.34
PRPF18-203ENST00000417658 MFAP3P55082 362 aa17.18■□□□□ 0.34
PRPF18-203ENST00000417658 COG7P83436 770 aa17.18■□□□□ 0.34
PRPF18-203ENST00000417658 ZACNQ401N2 412 aa17.18■□□□□ 0.34
PRPF18-203ENST00000417658 C10orf120Q5SQS8 335 aa17.18■□□□□ 0.34
PRPF18-203ENST00000417658 DCAF12L1Q5VU92 463 aa17.18■□□□□ 0.34
PRPF18-203ENST00000417658 CLEC20AQ6ZU45 233 aa17.18■□□□□ 0.34
PRPF18-203ENST00000417658 GPRIN1Q7Z2K8 1008 aa17.18■□□□□ 0.34
PRPF18-203ENST00000417658 ZCCHC9Q8N567 271 aaKnown RBP17.18■□□□□ 0.34
PRPF18-203ENST00000417658 BAHD1Q8TBE0 780 aaPredicted RBP17.18■□□□□ 0.34
PRPF18-203ENST00000417658 PRCCQ92733 491 aaPredicted RBP17.18■□□□□ 0.34
PRPF18-203ENST00000417658 BHMTQ93088 406 aa17.18■□□□□ 0.34
PRPF18-203ENST00000417658 SIPA1Q96FS4 1042 aa17.18■□□□□ 0.34
PRPF18-203ENST00000417658 CDK5RAP1Q96SZ6 601 aaKnown RBP17.18■□□□□ 0.34
PRPF18-203ENST00000417658 MIR1-1HGQ9H1L0 117 aa17.18■□□□□ 0.34
PRPF18-203ENST00000417658 SLC39A2Q9NP94 309 aa17.18■□□□□ 0.34
PRPF18-203ENST00000417658 SCUBE2Q9NQ36 999 aa17.18■□□□□ 0.34
PRPF18-203ENST00000417658 FAM49BQ9NUQ9 324 aa17.18■□□□□ 0.34
PRPF18-203ENST00000417658 DMAC2Q9NW81 257 aa17.18■□□□□ 0.34
PRPF18-203ENST00000417658 IGSF10Q6WRI0 2623 aa17.18■□□□□ 0.34
PRPF18-203ENST00000417658 CABIN1Q9Y6J0 2220 aa17.18■□□□□ 0.34
PRPF18-203ENST00000417658 PTPRBP23467 1997 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 A0A1W2PQH9 124 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 IKBKBO14920 756 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 TIMM44O43615 452 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 STX6O43752 255 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 ASS1P00966 412 aaKnown RBP17.17■□□□□ 0.34
PRPF18-203ENST00000417658 KLKB1P03952 638 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 IL12RB1P42701 662 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 KIF11P52732 1056 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 ORC1Q13415 861 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 GEN1Q17RS7 908 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 HLA-BQ31612 363 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 FYB2Q5VWT5 728 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 SLC9A9Q8IVB4 645 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 SPRYD3Q8NCJ5 442 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 C1orf216Q8TAB5 229 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 MDM1Q8TC05 714 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 ELMO3Q96BJ8 720 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 CYFIP2Q96F07 1278 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 P2RY11Q96G91 374 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 INTS4Q96HW7 963 aaKnown RBP17.17■□□□□ 0.34
PRPF18-203ENST00000417658 DCLK3Q9C098 648 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 IL21RQ9HBE5 538 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 CLIC5Q9NZA1 410 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 HMGXB4Q9UGU5 601 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 NUDT5Q9UKK9 219 aa17.17■□□□□ 0.34
PRPF18-203ENST00000417658 MDM4O15151 490 aa17.16■□□□□ 0.34
PRPF18-203ENST00000417658 FLRT2O43155 660 aa17.16■□□□□ 0.34
PRPF18-203ENST00000417658 CUTAO60888 179 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms