RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 PGBD3Q8N328 593 aa19.32■□□□□ 0.68
VPS16-204ENST00000417508 UBR7Q8N806 425 aa19.32■□□□□ 0.68
VPS16-204ENST00000417508 HMGB4Q8WW32 186 aa19.32■□□□□ 0.68
VPS16-204ENST00000417508 KCTD13Q8WZ19 329 aa19.32■□□□□ 0.68
VPS16-204ENST00000417508 NT5C1BQ96P26 610 aa19.32■□□□□ 0.68
VPS16-204ENST00000417508 LRRC4Q9HBW1 653 aa19.32■□□□□ 0.68
VPS16-204ENST00000417508 MARCH2Q9P0N8 246 aa19.32■□□□□ 0.68
VPS16-204ENST00000417508 RASAL2Q9UJF2 1139 aa19.32■□□□□ 0.68
VPS16-204ENST00000417508 SLC27A6Q9Y2P4 619 aa19.32■□□□□ 0.68
VPS16-204ENST00000417508 PI4KAP42356 2102 aa19.31■□□□□ 0.68
VPS16-204ENST00000417508 KHNYNO15037 678 aaKnown RBP19.31■□□□□ 0.68
VPS16-204ENST00000417508 NPC1O15118 1278 aa19.31■□□□□ 0.68
VPS16-204ENST00000417508 TRIM24O15164 1050 aa19.31■□□□□ 0.68
VPS16-204ENST00000417508 GNA14O95837 355 aa19.31■□□□□ 0.68
VPS16-204ENST00000417508 PENKP01210 267 aaPredicted RBP19.31■□□□□ 0.68
VPS16-204ENST00000417508 KLKB1P03952 638 aa19.31■□□□□ 0.68
VPS16-204ENST00000417508 SETSIPP0DME0 302 aa19.31■□□□□ 0.68
VPS16-204ENST00000417508 CD19P15391 556 aa19.31■□□□□ 0.68
VPS16-204ENST00000417508 STILQ15468 1287 aa19.31■□□□□ 0.68
VPS16-204ENST00000417508 GOLGA7BQ2TAP0 167 aa19.31■□□□□ 0.68
VPS16-204ENST00000417508 ISM2Q6H9L7 571 aa19.31■□□□□ 0.68
VPS16-204ENST00000417508 LCLAT1Q6UWP7 414 aa19.31■□□□□ 0.68
VPS16-204ENST00000417508 CYP2U1Q7Z449 544 aa19.31■□□□□ 0.68
VPS16-204ENST00000417508 CPXM2Q8N436 756 aa19.31■□□□□ 0.68
VPS16-204ENST00000417508 HCN2Q9UL51 889 aa19.31■□□□□ 0.68
VPS16-204ENST00000417508 PPP1R3GB7ZBB8 358 aa19.3■□□□□ 0.68
VPS16-204ENST00000417508 CYBBP04839 570 aa19.3■□□□□ 0.68
VPS16-204ENST00000417508 ADRB1P08588 477 aa19.3■□□□□ 0.68
VPS16-204ENST00000417508 HOXB2P14652 356 aa19.3■□□□□ 0.68
VPS16-204ENST00000417508 CD44P16070 742 aaKnown RBP19.3■□□□□ 0.68
VPS16-204ENST00000417508 BCKDHBP21953 392 aa19.3■□□□□ 0.68
VPS16-204ENST00000417508 CORO1AP31146 461 aaKnown RBP19.3■□□□□ 0.68
VPS16-204ENST00000417508 DHPSP49366 369 aaPredicted RBP19.3■□□□□ 0.68
VPS16-204ENST00000417508 ZNF132P52740 706 aa19.3■□□□□ 0.68
VPS16-204ENST00000417508 LRMPQ12912 555 aa19.3■□□□□ 0.68
VPS16-204ENST00000417508 MORC3Q14149 939 aa19.3■□□□□ 0.68
VPS16-204ENST00000417508 CNGA2Q16280 664 aa19.3■□□□□ 0.68
VPS16-204ENST00000417508 MAP7D1Q3KQU3 841 aa19.3■□□□□ 0.68
VPS16-204ENST00000417508 RNF43Q68DV7 783 aa19.3■□□□□ 0.68
VPS16-204ENST00000417508 TTI2Q6NXR4 508 aa19.3■□□□□ 0.68
VPS16-204ENST00000417508 SLC36A4Q6YBV0 504 aa19.3■□□□□ 0.68
VPS16-204ENST00000417508 CHPFQ8IZ52 775 aa19.3■□□□□ 0.68
VPS16-204ENST00000417508 NELFBQ8WX92 580 aa19.3■□□□□ 0.68
VPS16-204ENST00000417508 RLN3Q8WXF3 142 aa19.3■□□□□ 0.68
VPS16-204ENST00000417508 PLD4Q96BZ4 506 aa19.3■□□□□ 0.68
VPS16-204ENST00000417508 IPO9Q96P70 1041 aaKnown RBP19.3■□□□□ 0.68
VPS16-204ENST00000417508 GABRG3Q99928 467 aa19.3■□□□□ 0.68
VPS16-204ENST00000417508 ULBP1Q9BZM6 244 aa19.3■□□□□ 0.68
VPS16-204ENST00000417508 CNGB3Q9NQW8 809 aa19.3■□□□□ 0.68
VPS16-204ENST00000417508 RXFP3Q9NSD7 469 aa19.3■□□□□ 0.68
VPS16-204ENST00000417508 SLC12A8A0AV02 714 aa19.29■□□□□ 0.68
VPS16-204ENST00000417508 PRRT4C9JH25 899 aa19.29■□□□□ 0.68
VPS16-204ENST00000417508 O00370 1275 aa19.29■□□□□ 0.68
VPS16-204ENST00000417508 ZNF217O75362 1048 aa19.29■□□□□ 0.68
VPS16-204ENST00000417508 PKDCCQ504Y2 493 aa19.29■□□□□ 0.68
VPS16-204ENST00000417508 EGFLAMQ63HQ2 1017 aa19.29■□□□□ 0.68
VPS16-204ENST00000417508 KLHL10Q6JEL2 608 aa19.29■□□□□ 0.68
VPS16-204ENST00000417508 TMEM270Q6UE05 265 aa19.29■□□□□ 0.68
VPS16-204ENST00000417508 SIX6OS1Q8N1H7 587 aa19.29■□□□□ 0.68
VPS16-204ENST00000417508 RNF139Q8WU17 664 aa19.29■□□□□ 0.68
VPS16-204ENST00000417508 UCMAQ8WVF2 138 aa19.29■□□□□ 0.68
VPS16-204ENST00000417508 LSM14BQ9BX40 385 aaKnown RBP19.29■□□□□ 0.68
VPS16-204ENST00000417508 SLC2A11Q9BYW1 496 aa19.29■□□□□ 0.68
VPS16-204ENST00000417508 SMOC1Q9H4F8 434 aa19.29■□□□□ 0.68
VPS16-204ENST00000417508 ZDHHC4Q9NPG8 344 aa19.29■□□□□ 0.68
VPS16-204ENST00000417508 ABCC13Q9NSE7 274 aa19.29■□□□□ 0.68
VPS16-204ENST00000417508 AGO1Q9UL18 857 aaKnown RBP19.29■□□□□ 0.68
VPS16-204ENST00000417508 CIZ1Q9ULV3 898 aaPredicted RBP19.29■□□□□ 0.68
VPS16-204ENST00000417508 HBS1LQ9Y450 684 aaKnown RBP19.29■□□□□ 0.68
VPS16-204ENST00000417508 A0A1W2PQF6 199 aa19.28■□□□□ 0.68
VPS16-204ENST00000417508 AP5Z1O43299 807 aa19.28■□□□□ 0.68
VPS16-204ENST00000417508 FGFR1OPO95684 399 aaKnown RBP19.28■□□□□ 0.68
VPS16-204ENST00000417508 HMBSP08397 361 aa19.28■□□□□ 0.68
VPS16-204ENST00000417508 GABRG2P18507 467 aa19.28■□□□□ 0.68
VPS16-204ENST00000417508 BMP6P22004 513 aa19.28■□□□□ 0.68
VPS16-204ENST00000417508 HARS2P49590 506 aaKnown RBP19.28■□□□□ 0.68
VPS16-204ENST00000417508 ZNF445P59923 1031 aa19.28■□□□□ 0.68
VPS16-204ENST00000417508 TRIP4Q15650 581 aaPredicted RBP19.28■□□□□ 0.68
VPS16-204ENST00000417508 FYB2Q5VWT5 728 aa19.28■□□□□ 0.68
VPS16-204ENST00000417508 BSPRYQ5W0U4 402 aa19.28■□□□□ 0.68
VPS16-204ENST00000417508 TOGARAM2Q6ZUX3 1019 aa19.28■□□□□ 0.68
VPS16-204ENST00000417508 DENND1CQ8IV53 801 aa19.28■□□□□ 0.68
VPS16-204ENST00000417508 FAM217AQ8IXS0 508 aa19.28■□□□□ 0.68
VPS16-204ENST00000417508 PPM1KQ8N3J5 372 aa19.28■□□□□ 0.68
VPS16-204ENST00000417508 EHBP1Q8NDI1 1231 aa19.28■□□□□ 0.68
VPS16-204ENST00000417508 LMO3Q8TAP4 145 aa19.28■□□□□ 0.68
VPS16-204ENST00000417508 UBA3Q8TBC4 463 aa19.28■□□□□ 0.68
VPS16-204ENST00000417508 IPO4Q8TEX9 1081 aaKnown RBP19.28■□□□□ 0.68
VPS16-204ENST00000417508 PLK2Q9NYY3 685 aa19.28■□□□□ 0.68
VPS16-204ENST00000417508 EVLQ9UI08 416 aaPredicted RBP19.28■□□□□ 0.68
VPS16-204ENST00000417508 MBD1Q9UIS9 605 aaPredicted RBP19.28■□□□□ 0.68
VPS16-204ENST00000417508 PCDHB4Q9Y5E5 795 aa19.28■□□□□ 0.68
VPS16-204ENST00000417508 ACACBO00763 2458 aa19.27■□□□□ 0.68
VPS16-204ENST00000417508 TULP2O00295 520 aa19.27■□□□□ 0.68
VPS16-204ENST00000417508 TIMM44O43615 452 aa19.27■□□□□ 0.68
VPS16-204ENST00000417508 HOXD12P35452 270 aa19.27■□□□□ 0.68
VPS16-204ENST00000417508 MARSP56192 900 aaKnown RBP19.27■□□□□ 0.68
VPS16-204ENST00000417508 GCNT1Q02742 428 aa19.27■□□□□ 0.68
VPS16-204ENST00000417508 ADIGQ0VDE8 80 aa19.27■□□□□ 0.68
VPS16-204ENST00000417508 DAB2IPQ5VWQ8 1189 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms