RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 TRIM59Q8IWR1 403 aa18.98■□□□□ 0.63
VCP-202ENST00000417448 SCN4BQ8IWT1 228 aa18.98■□□□□ 0.63
VCP-202ENST00000417448 OR6B3Q8NGW1 331 aa18.98■□□□□ 0.63
VCP-202ENST00000417448 HSPA12BQ96MM6 686 aa18.98■□□□□ 0.63
VCP-202ENST00000417448 RNF38Q9H0F5 515 aa18.98■□□□□ 0.63
VCP-202ENST00000417448 METTL14Q9HCE5 456 aaKnown RBP18.98■□□□□ 0.63
VCP-202ENST00000417448 CD93Q9NPY3 652 aa18.98■□□□□ 0.63
VCP-202ENST00000417448 DKK4Q9UBT3 224 aa18.98■□□□□ 0.63
VCP-202ENST00000417448 ZNF462Q96JM2 2506 aa18.97■□□□□ 0.63
VCP-202ENST00000417448 ERCC5P28715 1186 aaPredicted RBP18.97■□□□□ 0.63
VCP-202ENST00000417448 GTF2H1P32780 548 aa18.97■□□□□ 0.63
VCP-202ENST00000417448 GRIA2P42262 883 aa18.97■□□□□ 0.63
VCP-202ENST00000417448 FMO5P49326 533 aa18.97■□□□□ 0.63
VCP-202ENST00000417448 STX1AQ16623 288 aa18.97■□□□□ 0.63
VCP-202ENST00000417448 CFAP221Q4G0U5 840 aa18.97■□□□□ 0.63
VCP-202ENST00000417448 FOXR2Q6PJQ5 311 aa18.97■□□□□ 0.63
VCP-202ENST00000417448 SLC36A4Q6YBV0 504 aa18.97■□□□□ 0.63
VCP-202ENST00000417448 SNX25Q9H3E2 840 aa18.97■□□□□ 0.63
VCP-202ENST00000417448 DPEP3Q9H4B8 488 aa18.97■□□□□ 0.63
VCP-202ENST00000417448 DACH1Q9UI36 760 aa18.97■□□□□ 0.63
VCP-202ENST00000417448 SYCE3A1L190 88 aa18.96■□□□□ 0.63
VCP-202ENST00000417448 GABRDO14764 452 aa18.96■□□□□ 0.63
VCP-202ENST00000417448 WARSP23381 471 aaKnown RBP18.96■□□□□ 0.63
VCP-202ENST00000417448 GNL1P36915 607 aaPredicted RBP18.96■□□□□ 0.63
VCP-202ENST00000417448 TNFRSF4P43489 277 aa18.96■□□□□ 0.63
VCP-202ENST00000417448 NOP14P78316 857 aaKnown RBP18.96■□□□□ 0.63
VCP-202ENST00000417448 KCNH2Q12809 1159 aa18.96■□□□□ 0.63
VCP-202ENST00000417448 NFKBIBQ15653 356 aa18.96■□□□□ 0.63
VCP-202ENST00000417448 PLEKHG6Q3KR16 790 aa18.96■□□□□ 0.63
VCP-202ENST00000417448 GLRX5Q86SX6 157 aa18.96■□□□□ 0.63
VCP-202ENST00000417448 MIB1Q86YT6 1006 aa18.96■□□□□ 0.63
VCP-202ENST00000417448 TMEM86AQ8N2M4 240 aa18.96■□□□□ 0.63
VCP-202ENST00000417448 FBXL13Q8NEE6 735 aa18.96■□□□□ 0.63
VCP-202ENST00000417448 CD248Q9HCU0 757 aa18.96■□□□□ 0.63
VCP-202ENST00000417448 ANO10Q9NW15 660 aa18.96■□□□□ 0.63
VCP-202ENST00000417448 RAB20Q9NX57 234 aa18.96■□□□□ 0.63
VCP-202ENST00000417448 SMPD4Q9NXE4 827 aa18.96■□□□□ 0.63
VCP-202ENST00000417448 TOR4AQ9NXH8 423 aa18.96■□□□□ 0.63
VCP-202ENST00000417448 HMGXB4Q9UGU5 601 aa18.96■□□□□ 0.63
VCP-202ENST00000417448 PCOLCE2Q9UKZ9 415 aa18.96■□□□□ 0.63
VCP-202ENST00000417448 APOBEC2Q9Y235 224 aaKnown RBP18.96■□□□□ 0.63
VCP-202ENST00000417448 CPQQ9Y646 472 aa18.96■□□□□ 0.63
VCP-202ENST00000417448 STX10O60499 249 aa18.95■□□□□ 0.62
VCP-202ENST00000417448 FGFR1OPO95684 399 aaKnown RBP18.95■□□□□ 0.62
VCP-202ENST00000417448 STAU1O95793 577 aaKnown RBP18.95■□□□□ 0.62
VCP-202ENST00000417448 OLFM2O95897 454 aa18.95■□□□□ 0.62
VCP-202ENST00000417448 ADH5P11766 374 aa18.95■□□□□ 0.62
VCP-202ENST00000417448 ASPAP45381 313 aa18.95■□□□□ 0.62
VCP-202ENST00000417448 MTIF2P46199 727 aaKnown RBP18.95■□□□□ 0.62
VCP-202ENST00000417448 PDE6CP51160 858 aa18.95■□□□□ 0.62
VCP-202ENST00000417448 SLC7A9P82251 487 aa18.95■□□□□ 0.62
VCP-202ENST00000417448 MYL7Q01449 175 aa18.95■□□□□ 0.62
VCP-202ENST00000417448 ENPEPQ07075 957 aa18.95■□□□□ 0.62
VCP-202ENST00000417448 GRIK2Q13002 908 aa18.95■□□□□ 0.62
VCP-202ENST00000417448 ANO6Q4KMQ2 910 aa18.95■□□□□ 0.62
VCP-202ENST00000417448 TMPRSS7Q7RTY8 843 aa18.95■□□□□ 0.62
VCP-202ENST00000417448 SPATA2LQ8IUW3 424 aaPredicted RBP18.95■□□□□ 0.62
VCP-202ENST00000417448 ZNF513Q8N8E2 541 aaPredicted RBP18.95■□□□□ 0.62
VCP-202ENST00000417448 ERLEC1Q96DZ1 483 aa18.95■□□□□ 0.62
VCP-202ENST00000417448 ARID3AQ99856 593 aa18.95■□□□□ 0.62
VCP-202ENST00000417448 SYT15Q9BQS2 421 aa18.95■□□□□ 0.62
VCP-202ENST00000417448 VRTNQ9H8Y1 702 aa18.95■□□□□ 0.62
VCP-202ENST00000417448 CRTAC1Q9NQ79 661 aa18.95■□□□□ 0.62
VCP-202ENST00000417448 CYP8B1Q9UNU6 501 aa18.95■□□□□ 0.62
VCP-202ENST00000417448 NFE2L3Q9Y4A8 694 aa18.95■□□□□ 0.62
VCP-202ENST00000417448 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.95■□□□□ 0.62
VCP-202ENST00000417448 A0A087WV48 116 aa18.94■□□□□ 0.62
VCP-202ENST00000417448 A0A1W2PQF6 199 aa18.94■□□□□ 0.62
VCP-202ENST00000417448 GNA14O95837 355 aa18.94■□□□□ 0.62
VCP-202ENST00000417448 CD58P19256 250 aa18.94■□□□□ 0.62
VCP-202ENST00000417448 MAOBP27338 520 aa18.94■□□□□ 0.62
VCP-202ENST00000417448 WASP42768 502 aa18.94■□□□□ 0.62
VCP-202ENST00000417448 LHX1P48742 406 aa18.94■□□□□ 0.62
VCP-202ENST00000417448 CYP4F3Q08477 520 aa18.94■□□□□ 0.62
VCP-202ENST00000417448 C19orf57Q0VDD7 668 aa18.94■□□□□ 0.62
VCP-202ENST00000417448 DPH6Q7L8W6 267 aa18.94■□□□□ 0.62
VCP-202ENST00000417448 KIAA1958Q8N8K9 716 aa18.94■□□□□ 0.62
VCP-202ENST00000417448 ZNF419Q96HQ0 510 aaPredicted RBP18.94■□□□□ 0.62
VCP-202ENST00000417448 FUBP3Q96I24 572 aaKnown RBP eCLIP18.94■□□□□ 0.62
VCP-202ENST00000417448 CRACR2AQ9BSW2 395 aa18.94■□□□□ 0.62
VCP-202ENST00000417448 FANCLQ9NW38 375 aa18.94■□□□□ 0.62
VCP-202ENST00000417448 KIAA1522Q9P206 1035 aaPredicted RBP18.94■□□□□ 0.62
VCP-202ENST00000417448 ZNF840PA6NDX5 716 aa18.93■□□□□ 0.62
VCP-202ENST00000417448 A8MXQ7 604 aa18.93■□□□□ 0.62
VCP-202ENST00000417448 TACC1O75410 805 aa18.93■□□□□ 0.62
VCP-202ENST00000417448 DKK1O94907 266 aa18.93■□□□□ 0.62
VCP-202ENST00000417448 ADH1CP00326 375 aa18.93■□□□□ 0.62
VCP-202ENST00000417448 AFPP02771 609 aaKnown RBP18.93■□□□□ 0.62
VCP-202ENST00000417448 HOXB2P14652 356 aa18.93■□□□□ 0.62
VCP-202ENST00000417448 PFKLP17858 780 aa18.93■□□□□ 0.62
VCP-202ENST00000417448 NDUFV2P19404 249 aa18.93■□□□□ 0.62
VCP-202ENST00000417448 NDST1P52848 882 aa18.93■□□□□ 0.62
VCP-202ENST00000417448 MARSP56192 900 aaKnown RBP18.93■□□□□ 0.62
VCP-202ENST00000417448 APBA1Q02410 837 aa18.93■□□□□ 0.62
VCP-202ENST00000417448 MDH1BQ5I0G3 518 aa18.93■□□□□ 0.62
VCP-202ENST00000417448 LY6G5CQ5SRR4 150 aa18.93■□□□□ 0.62
VCP-202ENST00000417448 ETFBKMTQ8IXQ9 262 aa18.93■□□□□ 0.62
VCP-202ENST00000417448 RGL4Q8IZJ4 473 aa18.93■□□□□ 0.62
VCP-202ENST00000417448 NAT16Q8N8M0 369 aa18.93■□□□□ 0.62
VCP-202ENST00000417448 BAHD1Q8TBE0 780 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms