RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 GFPT1Q06210 699 aaPredicted RBP15.16■□□□□ 0.02
PAF1-202ENST00000416728 DUOXA1Q1HG43 343 aa15.16■□□□□ 0.02
PAF1-202ENST00000416728 ARHGAP18Q8N392 663 aa15.16■□□□□ 0.02
PAF1-202ENST00000416728 FBXL13Q8NEE6 735 aa15.16■□□□□ 0.02
PAF1-202ENST00000416728 SEMA4DQ92854 862 aa15.16■□□□□ 0.02
PAF1-202ENST00000416728 EEF2KMTQ96G04 330 aa15.16■□□□□ 0.02
PAF1-202ENST00000416728 CCDC34Q96HJ3 373 aa15.16■□□□□ 0.02
PAF1-202ENST00000416728 GOLPH3LQ9H4A5 285 aa15.16■□□□□ 0.02
PAF1-202ENST00000416728 SLC32A1Q9H598 525 aa15.16■□□□□ 0.02
PAF1-202ENST00000416728 CD248Q9HCU0 757 aa15.16■□□□□ 0.02
PAF1-202ENST00000416728 CISHQ9NSE2 258 aa15.16■□□□□ 0.02
PAF1-202ENST00000416728 RAB20Q9NX57 234 aa15.16■□□□□ 0.02
PAF1-202ENST00000416728 RAD54BQ9Y620 910 aa15.16■□□□□ 0.02
PAF1-202ENST00000416728 KMT2BQ9UMN6 2715 aaPredicted RBP15.16■□□□□ 0.02
PAF1-202ENST00000416728 STX10O60499 249 aa15.15■□□□□ 0.02
PAF1-202ENST00000416728 ZNF202O95125 648 aa15.15■□□□□ 0.02
PAF1-202ENST00000416728 KLKB1P03952 638 aa15.15■□□□□ 0.02
PAF1-202ENST00000416728 HMBSP08397 361 aa15.15■□□□□ 0.02
PAF1-202ENST00000416728 SERPINF2P08697 491 aa15.15■□□□□ 0.02
PAF1-202ENST00000416728 EPB41P11171 864 aaKnown RBP15.15■□□□□ 0.02
PAF1-202ENST00000416728 CORO1AP31146 461 aaKnown RBP15.15■□□□□ 0.02
PAF1-202ENST00000416728 SLC8A3P57103 927 aa15.15■□□□□ 0.02
PAF1-202ENST00000416728 EFEMP1Q12805 493 aa15.15■□□□□ 0.02
PAF1-202ENST00000416728 RSRC2Q7L4I2 434 aaKnown RBP15.15■□□□□ 0.02
PAF1-202ENST00000416728 HDDC3Q8N4P3 179 aa15.15■□□□□ 0.02
PAF1-202ENST00000416728 TMEM176AQ96HP8 235 aa15.15■□□□□ 0.02
PAF1-202ENST00000416728 MRGPRX1Q96LB2 322 aa15.15■□□□□ 0.02
PAF1-202ENST00000416728 HSPA12BQ96MM6 686 aa15.15■□□□□ 0.02
PAF1-202ENST00000416728 GTPBP2Q9BX10 602 aaKnown RBP15.15■□□□□ 0.02
PAF1-202ENST00000416728 DCLK3Q9C098 648 aa15.15■□□□□ 0.02
PAF1-202ENST00000416728 FBXO10Q9UK96 956 aa15.15■□□□□ 0.02
PAF1-202ENST00000416728 STRIP2Q9ULQ0 834 aa15.15■□□□□ 0.02
PAF1-202ENST00000416728 CETN3O15182 167 aa15.14■□□□□ 0.01
PAF1-202ENST00000416728 NDUFS2O75306 463 aa15.14■□□□□ 0.01
PAF1-202ENST00000416728 PENKP01210 267 aaPredicted RBP15.14■□□□□ 0.01
PAF1-202ENST00000416728 PROS1P07225 676 aa15.14■□□□□ 0.01
PAF1-202ENST00000416728 RAD23BP54727 409 aa15.14■□□□□ 0.01
PAF1-202ENST00000416728 MCCD1P59942 119 aaPredicted RBP15.14■□□□□ 0.01
PAF1-202ENST00000416728 STARD3Q14849 445 aa15.14■□□□□ 0.01
PAF1-202ENST00000416728 ARHGAP17Q68EM7 881 aa15.14■□□□□ 0.01
PAF1-202ENST00000416728 KIAA1324Q6UXG2 1013 aaKnown RBP15.14■□□□□ 0.01
PAF1-202ENST00000416728 PIGZQ86VD9 579 aa15.14■□□□□ 0.01
PAF1-202ENST00000416728 SLC41A1Q8IVJ1 513 aa15.14■□□□□ 0.01
PAF1-202ENST00000416728 SMYD4Q8IYR2 804 aaPredicted RBP15.14■□□□□ 0.01
PAF1-202ENST00000416728 TRIML1Q8N9V2 468 aa15.14■□□□□ 0.01
PAF1-202ENST00000416728 SLC4A11Q8NBS3 891 aa15.14■□□□□ 0.01
PAF1-202ENST00000416728 ARID3AQ99856 593 aa15.14■□□□□ 0.01
PAF1-202ENST00000416728 UBXN6Q9BZV1 441 aa15.14■□□□□ 0.01
PAF1-202ENST00000416728 SLC6A17Q9H1V8 727 aa15.14■□□□□ 0.01
PAF1-202ENST00000416728 FAM124BQ9H5Z6 455 aaPredicted RBP15.14■□□□□ 0.01
PAF1-202ENST00000416728 CAPN10Q9HC96 672 aa15.14■□□□□ 0.01
PAF1-202ENST00000416728 FSCN3Q9NQT6 498 aa15.14■□□□□ 0.01
PAF1-202ENST00000416728 MARCH2Q9P0N8 246 aa15.14■□□□□ 0.01
PAF1-202ENST00000416728 SLC27A6Q9Y2P4 619 aa15.14■□□□□ 0.01
PAF1-202ENST00000416728 STON1Q9Y6Q2 735 aa15.14■□□□□ 0.01
PAF1-202ENST00000416728 WASH3PC4AMC7 463 aa15.13■□□□□ 0.01
PAF1-202ENST00000416728 NPC1O15118 1278 aa15.13■□□□□ 0.01
PAF1-202ENST00000416728 CYBBP04839 570 aa15.13■□□□□ 0.01
PAF1-202ENST00000416728 SPINK2P20155 84 aa15.13■□□□□ 0.01
PAF1-202ENST00000416728 MFAP3P55082 362 aa15.13■□□□□ 0.01
PAF1-202ENST00000416728 YWHAGP61981 247 aaKnown RBP eCLIP15.13■□□□□ 0.01
PAF1-202ENST00000416728 RAB41Q5JT25 222 aa15.13■□□□□ 0.01
PAF1-202ENST00000416728 TCERG1LQ5VWI1 586 aa15.13■□□□□ 0.01
PAF1-202ENST00000416728 FYB2Q5VWT5 728 aa15.13■□□□□ 0.01
PAF1-202ENST00000416728 UNQ6494/PRO21346Q6UXR6 183 aa15.13■□□□□ 0.01
PAF1-202ENST00000416728 DENND1CQ8IV53 801 aa15.13■□□□□ 0.01
PAF1-202ENST00000416728 ANKRD52Q8NB46 1076 aa15.13■□□□□ 0.01
PAF1-202ENST00000416728 UCMAQ8WVF2 138 aa15.13■□□□□ 0.01
PAF1-202ENST00000416728 P2RY11Q96G91 374 aa15.13■□□□□ 0.01
PAF1-202ENST00000416728 AGO1Q9UL18 857 aaKnown RBP15.13■□□□□ 0.01
PAF1-202ENST00000416728 WASF3Q9UPY6 502 aa15.13■□□□□ 0.01
PAF1-202ENST00000416728 LAMA1P25391 3075 aa15.13■□□□□ 0.01
PAF1-202ENST00000416728 SLC12A8A0AV02 714 aa15.12■□□□□ 0.01
PAF1-202ENST00000416728 C1QTNF9BB2RNN3 333 aa15.12■□□□□ 0.01
PAF1-202ENST00000416728 OPHN1O60890 802 aa15.12■□□□□ 0.01
PAF1-202ENST00000416728 C1QTNF9P0C862 333 aa15.12■□□□□ 0.01
PAF1-202ENST00000416728 TKTL1P51854 596 aa15.12■□□□□ 0.01
PAF1-202ENST00000416728 ZNF132P52740 706 aa15.12■□□□□ 0.01
PAF1-202ENST00000416728 SEMA3BQ13214 749 aa15.12■□□□□ 0.01
PAF1-202ENST00000416728 GEN1Q17RS7 908 aa15.12■□□□□ 0.01
PAF1-202ENST00000416728 FUT11Q495W5 492 aa15.12■□□□□ 0.01
PAF1-202ENST00000416728 DCAF17Q5H9S7 520 aaPredicted RBP15.12■□□□□ 0.01
PAF1-202ENST00000416728 SYCP2LQ5T4T6 812 aa15.12■□□□□ 0.01
PAF1-202ENST00000416728 ANKS1BQ7Z6G8 1248 aa15.12■□□□□ 0.01
PAF1-202ENST00000416728 RGL4Q8IZJ4 473 aa15.12■□□□□ 0.01
PAF1-202ENST00000416728 FOXJ1Q92949 421 aa15.12■□□□□ 0.01
PAF1-202ENST00000416728 TATDN2Q93075 761 aa15.12■□□□□ 0.01
PAF1-202ENST00000416728 ZNF419Q96HQ0 510 aaPredicted RBP15.12■□□□□ 0.01
PAF1-202ENST00000416728 TSG101Q99816 390 aa15.12■□□□□ 0.01
PAF1-202ENST00000416728 ADAM33Q9BZ11 813 aa15.12■□□□□ 0.01
PAF1-202ENST00000416728 GDPD2Q9HCC8 539 aa15.12■□□□□ 0.01
PAF1-202ENST00000416728 CD93Q9NPY3 652 aa15.12■□□□□ 0.01
PAF1-202ENST00000416728 RMND1Q9NWS8 449 aa15.12■□□□□ 0.01
PAF1-202ENST00000416728 MYO18AQ92614 2054 aaKnown RBP15.12■□□□□ 0.01
PAF1-202ENST00000416728 MYH10P35580 1976 aa15.12■□□□□ 0.01
PAF1-202ENST00000416728 PLXND1Q9Y4D7 1925 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 UPK3BL1B0FP48 263 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 UPK3BL2E5RIL1 263 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 ARHGAP33O14559 1287 aa15.11■□□□□ 0.01
PAF1-202ENST00000416728 TOP3BO95985 862 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms